Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:9927710-9930445[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.5 1.2e+03 2.2 0.0 3 20 35 52 34 54 0.93

2 14 6.1 1.1e+03 2.3 0.1 1 12 151 162 151 164 0.91

3 14 0.047 8.5 8.9 1.9 1 20 301 320 301 322 0.95

4 14 4.1e-05 0.0074 18.6 3.5 1 23 329 351 329 351 0.99

5 14 3.8e-06 0.0007 21.8 0.6 1 23 367 389 367 389 0.98

6 14 0.09 16 8.0 0.6 1 15 419 432 419 440 0.74

7 14 7.4e-07 0.00014 24.0 1.6 1 23 446 468 446 468 0.98

8 14 0.051 9.3 8.8 4.5 3 23 476 496 474 496 0.95

9 14 0.00032 0.058 15.7 2.7 1 23 502 524 502 524 0.99

10 14 1e-06 0.00018 23.6 4.2 1 23 530 552 530 552 0.98

11 14 0.002 0.37 13.2 6.7 1 23 558 580 558 580 0.98

12 14 3.2e-05 0.0059 18.9 0.2 1 23 586 608 586 608 0.98

13 14 2.8e-05 0.0051 19.1 0.1 1 23 612 634 612 634 0.98

14 14 0.00088 0.16 14.4 0.1 1 23 642 665 642 665 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.5	1.2e+03	2.2	0.0	3	20	35	52	34	54	0.93
2	14	6.1	1.1e+03	2.3	0.1	1	12	151	162	151	164	0.91
3	14	0.047	8.5	8.9	1.9	1	20	301	320	301	322	0.95
4	14	4.1e-05	0.0074	18.6	3.5	1	23	329	351	329	351	0.99
5	14	3.8e-06	0.0007	21.8	0.6	1	23	367	389	367	389	0.98
6	14	0.09	16	8.0	0.6	1	15	419	432	419	440	0.74
7	14	7.4e-07	0.00014	24.0	1.6	1	23	446	468	446	468	0.98
8	14	0.051	9.3	8.8	4.5	3	23	476	496	474	496	0.95
9	14	0.00032	0.058	15.7	2.7	1	23	502	524	502	524	0.99
10	14	1e-06	0.00018	23.6	4.2	1	23	530	552	530	552	0.98
11	14	0.002	0.37	13.2	6.7	1	23	558	580	558	580	0.98
12	14	3.2e-05	0.0059	18.9	0.2	1	23	586	608	586	608	0.98
13	14	2.8e-05	0.0051	19.1	0.1	1	23	612	634	612	634	0.98
14	14	0.00088	0.16	14.4	0.1	1	23	642	665	642	665	0.96

Sequence Information

Coding Sequence: atgggAGCAGTTCCACTGGATTGCCCATTATGTTGTTCAGAAACATTTACGTGTACACAATCGCTTAAATATCATCTGCTgagtataattgaaaatatattatgtcCATCGTGTGAATCTCGATTCTCAACAATACTTGAGTTGGCCGACCACTTGGATAACGAGTGTGGAAAAACAGATAAAAGCGCGCCAAATTCAGATGCAACTATTGTCAAAGTAGAAAACGAAGATTCTAATGAGGATTTACAAAGTAGTTTATTGGCTAAAGCATTGTTAAACCCACAAAGTGACTCTAAGAATCAGGTTTATATCCACACGAATTCAAATGGGGAAACTACAATTGAAGAAAGTTCAGAAACTATTTATATTGAGGAGGGTAATATTGAAGAAATGGGAACGGAAGACAATGAAACTCAAGAAAATGAGGAAGTACTTGTCGATCAAGAAGTTTATTCCTGTTTGAGTTGTGGAATGAATTTCACATCGATTGTTGATCATGTTCAGGATTATCATGAGGGAGAACAAGTTATTGTTGAGATGTCAGAGGGAGATCAAAATGGATCAAAAGAAGACGAGGAGCTTCTAAAAAATATGCTGTCGGAAGACACagttctaataaataattacgaGGACGACGAGGATTTAGGGAGCAATAATAGTCAAGATATGTTGGATAACCGAAGTCGGATGCCTCAAATTCTCAATACAATTAAACAGGAGGACTGTATTGATAAGGATGGCCGTTTATACACCCGAAAAGTAGTACAAATCGAAAAATTTTGGGATGATGATACAAAAAGATCGCCGActgtattaaaatatatttatgattcGGATGGAACGTTAACTAAATACGATTCAGGGGATGAGGTCGAAGAAGGGACACAGATAATGGAGATTTTTCAATGTACTACTTGTAATGTCCAATTCCCAAAGCGGGAACAATTTAATTCGCACGCTTGTGATCCGGAAATTGGCAGCGAATATAAATGTTCAATGTGCGAAAGTAGCTTCACTAGTTCGCAATCATTATGCGCTCATATGAAAAGCCATAAAAGAATAAAAACTGAAGTTGCAGATCCACCTCCAACTGGTCCTTTTGTTTGTACCGTTTGCGATACCGTTTTCCCTAGTAATAAATCATTACGTTTGCATCGTCGAATGCATGATCCAATTAAAGCTAAAGAAATAGAAGCACCGGTTGAATATGGAATAACCGGGAACGAGTCTGGGGAGAATAAAGCGCGAGAAATGTTTGATTGTAAAGTTTGCGGGAAAAGCTATGATAAAAGTTATGAAGATATTCATATGGCGTATCACAGCGGCGTAAATCATTACGATTGTTATATTTGTAATCGGAAATTTTATACCCGATCTAATTTGGAGATGCATATGCGAGTGCACGGCACGGAAAAGGGGCACCTGTGTTCGCACTGCAAAAAAGGCTTCCTGACGGAAGAAAGTTTGCAGCAACATTTGAAACAACATTGCAGTAGCCGTCCTTATCAATGTAGCTACTGTTCGCGGCGCTTCGCGCGTCCGCACGAAAAAGTCAAACACGAAAGAATTCACACGGGGGAAAAGCCGCACGAGTGCGAAATTTGCGGCAAAACATTCCGCGTTTCCTACTGTTTAACTTTACACATGCGCACTCATTCTGGCTATAGACCATACGTCTGTCAACACTGCGGAAAAAGATTCAAAGCACACAGTGTTTACAACCATCATTTATTAACTCATTCAGATGTACGAGGCTACAAATGTCCCTACTGCCCTAAAGCTTTCAAAACTGGCGTGCAACTCGCAGGCCACAAAAACAGTCACACTAAACCCTTCAGTTGCACTGAATGCAATCGCCCATTCGCTAGTTTATACGCAGTTCGGGCTCACATGGAAACTCATAAACGCGAAAATAATCTCAAATATAATTGCTATTTATGCGGCGCCTCGTACGCCCGAGCTTTCGCTTTAAGAGATCACATTAAAGAAGTGCACATAGATGCACCACAAAACGGAAATATTGCTCTAGATATTATTGAAGAGGGAATGGAAGCTTCCACCTCCATTTTACCTGATAATGATATATCCATGGTTACTTTAGAAATGTCAGAAAATGTTGACGACATTGAAGAAGAAGTTGGACAATAG
Protein Sequence: MGAVPLDCPLCCSETFTCTQSLKYHLLSIIENILCPSCESRFSTILELADHLDNECGKTDKSAPNSDATIVKVENEDSNEDLQSSLLAKALLNPQSDSKNQVYIHTNSNGETTIEESSETIYIEEGNIEEMGTEDNETQENEEVLVDQEVYSCLSCGMNFTSIVDHVQDYHEGEQVIVEMSEGDQNGSKEDEELLKNMLSEDTVLINNYEDDEDLGSNNSQDMLDNRSRMPQILNTIKQEDCIDKDGRLYTRKVVQIEKFWDDDTKRSPTVLKYIYDSDGTLTKYDSGDEVEEGTQIMEIFQCTTCNVQFPKREQFNSHACDPEIGSEYKCSMCESSFTSSQSLCAHMKSHKRIKTEVADPPPTGPFVCTVCDTVFPSNKSLRLHRRMHDPIKAKEIEAPVEYGITGNESGENKAREMFDCKVCGKSYDKSYEDIHMAYHSGVNHYDCYICNRKFYTRSNLEMHMRVHGTEKGHLCSHCKKGFLTEESLQQHLKQHCSSRPYQCSYCSRRFARPHEKVKHERIHTGEKPHECEICGKTFRVSYCLTLHMRTHSGYRPYVCQHCGKRFKAHSVYNHHLLTHSDVRGYKCPYCPKAFKTGVQLAGHKNSHTKPFSCTECNRPFASLYAVRAHMETHKRENNLKYNCYLCGASYARAFALRDHIKEVHIDAPQNGNIALDIIEEGMEASTSILPDNDISMVTLEMSENVDDIEEEVGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01226057;
90% Identity: -
80% Identity: -