Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:65062057-65063466[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3e-06 0.00054 22.1 1.7 1 23 51 73 51 73 0.98

2 15 2 3.6e+02 3.8 0.8 1 8 86 93 86 98 0.93

3 15 5.4e-06 0.00099 21.3 0.8 1 23 103 125 103 125 0.98

4 15 4.4e-05 0.0081 18.5 2.3 1 23 131 153 131 153 0.98

5 15 3e-05 0.0054 19.0 3.5 1 23 159 181 159 181 0.98

6 15 7.4e-05 0.014 17.7 2.6 1 23 187 209 187 209 0.97

7 15 0.00019 0.035 16.5 0.5 1 23 215 237 215 237 0.98

8 15 7.1e-05 0.013 17.8 2.9 1 19 243 261 243 264 0.95

9 15 2.5e-05 0.0045 19.2 5.2 1 23 271 293 271 293 0.97

10 15 4.9e-07 8.9e-05 24.6 2.8 1 23 299 321 299 321 0.98

11 15 3.8e-06 0.0007 21.8 1.2 1 20 327 346 327 348 0.94

12 15 0.00086 0.16 14.4 0.6 1 23 355 377 355 377 0.97

13 15 7e-05 0.013 17.8 2.4 1 23 383 405 383 405 0.96

14 15 6.3e-06 0.0012 21.1 5.9 1 23 411 433 411 433 0.98

15 15 8.4e-06 0.0015 20.7 3.6 1 23 439 461 439 461 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3e-06	0.00054	22.1	1.7	1	23	51	73	51	73	0.98
2	15	2	3.6e+02	3.8	0.8	1	8	86	93	86	98	0.93
3	15	5.4e-06	0.00099	21.3	0.8	1	23	103	125	103	125	0.98
4	15	4.4e-05	0.0081	18.5	2.3	1	23	131	153	131	153	0.98
5	15	3e-05	0.0054	19.0	3.5	1	23	159	181	159	181	0.98
6	15	7.4e-05	0.014	17.7	2.6	1	23	187	209	187	209	0.97
7	15	0.00019	0.035	16.5	0.5	1	23	215	237	215	237	0.98
8	15	7.1e-05	0.013	17.8	2.9	1	19	243	261	243	264	0.95
9	15	2.5e-05	0.0045	19.2	5.2	1	23	271	293	271	293	0.97
10	15	4.9e-07	8.9e-05	24.6	2.8	1	23	299	321	299	321	0.98
11	15	3.8e-06	0.0007	21.8	1.2	1	20	327	346	327	348	0.94
12	15	0.00086	0.16	14.4	0.6	1	23	355	377	355	377	0.97
13	15	7e-05	0.013	17.8	2.4	1	23	383	405	383	405	0.96
14	15	6.3e-06	0.0012	21.1	5.9	1	23	411	433	411	433	0.98
15	15	8.4e-06	0.0015	20.7	3.6	1	23	439	461	439	461	0.98

Sequence Information

Coding Sequence: atgagtaaagattttattattgaagaagataataaaaatttgatagtAATTGAAGAATTACAATTACCGCATGACGTCgaagaaaaaaaagtacaaatatcAAGTCCTGTAAAAAACGAAAATATTAGCAAACAGGATAAAAATGAGGAATATGAATGTGATATGTGTAATAAAACATATTACACTCAAATGCTTTTGAAGAGACATTTGCAAATGCATGGAATATTGCTTTGTGATTGCCAGAAAAATAGGATGTACAAATGCAAAAAATGCAACAAATTGTCGATATATCCGCAAAAGTCAAAATACACTTGTAACATTTGTGACAAATCATACCAAAACTTGCAATATTTAAAAGATCACATTCAAGTGCACTTTGGGGAAAAACGATATACTTGTGAACTTTGCAAAAAATCATTTGGATTTTTAGTTAATTTAAAGAAGCATAAATCCACACATACAGGTGGGAAATTATTTCCTTGTAAGCTTTGCAGCAAATCATTCAAACATGCGGAATCTTTGTATACGCATAGACGTCTACACACTGGGGAAAAGCCATACACTTGTGAAGTCTGCAATAAATCATACAGACTTGCGCATAGTTTGAAGCGTCATAAACTTGAACACACTGGAGAAAAACCTTTTAGTTGTGGAATTTGCCAAAaatcatttacaattttacCTTATTTAAAGCAGCATGAACTCACACATAATGTTGAAAAACCATTTTCTTGTGCAGTTTGCGGCAAATCATTTAGATATTCGAAAGATTTGAAGAAGCATAATTGTCAAAAACTTGTTagaaaaccatttacttgtgcgCTTTGTGATAAATCATTCAGGAATTTGTCTCATTTGAAAGAACACCATTACATGCACACTGGTGCTAAACCATATACTTGTAAAGATTGCAACAAGTCGTTTAGATATTCAAGTTCTTTGACGCAGCATAAACtgatacacactggtgaaaaaccattcacatGTGAAACTTGCAATAAAGCATTCCGAAGTTCCTCCAATTTGAAAGTGCATAAATCTAAACGCACTAATGGCAAACGatatacttgtgaaatttgccaAAGATCATTTGGAGCTTTGTTTACTTTGAAGCGGCACAATCTTGTACATTCTGGTGAAAAGACATTTACTTGTAAAGTTTGCCAAAAATCATTTGGCCAAGCGTGTTCTTTACAGCGACATGAGCTTCTACACACAggcgaaaaaccatttacttgcgaaacttgcaacaaatcattcaagcATTTGAGTACTTTGCGGAAACATAAATTAACACACACTGGTGATAGaccatttacttgtgatatTTGCGATTATTCATGCCGACGGTTGGACAATTTGAAGAGGCATAAATTATCGCACTCACCAGATCACGTCAAATCCGATTAG
Protein Sequence: MSKDFIIEEDNKNLIVIEELQLPHDVEEKKVQISSPVKNENISKQDKNEEYECDMCNKTYYTQMLLKRHLQMHGILLCDCQKNRMYKCKKCNKLSIYPQKSKYTCNICDKSYQNLQYLKDHIQVHFGEKRYTCELCKKSFGFLVNLKKHKSTHTGGKLFPCKLCSKSFKHAESLYTHRRLHTGEKPYTCEVCNKSYRLAHSLKRHKLEHTGEKPFSCGICQKSFTILPYLKQHELTHNVEKPFSCAVCGKSFRYSKDLKKHNCQKLVRKPFTCALCDKSFRNLSHLKEHHYMHTGAKPYTCKDCNKSFRYSSSLTQHKLIHTGEKPFTCETCNKAFRSSSNLKVHKSKRTNGKRYTCEICQRSFGALFTLKRHNLVHSGEKTFTCKVCQKSFGQACSLQRHELLHTGEKPFTCETCNKSFKHLSTLRKHKLTHTGDRPFTCDICDYSCRRLDNLKRHKLSHSPDHVKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470530;
90% Identity: iTF_00470530;
80% Identity: iTF_00470530;