Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022333.1:2146133-2150402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0017 0.3 13.5 1.5 3 20 120 137 118 139 0.93

2 14 0.00044 0.08 15.3 6.5 2 23 139 161 138 161 0.93

3 14 8e-06 0.0015 20.8 0.4 2 23 168 189 167 189 0.96

4 14 0.00018 0.033 16.5 0.1 1 23 222 244 222 244 0.97

5 14 0.12 22 7.6 4.6 1 23 250 272 250 272 0.93

6 14 6.4e-07 0.00012 24.2 2.6 1 23 278 300 278 300 0.98

7 14 9e-05 0.016 17.5 1.7 1 23 309 331 309 331 0.96

8 14 2.4e-05 0.0044 19.3 0.1 2 23 338 359 337 359 0.95

9 14 9.7e-09 1.8e-06 30.0 0.6 1 23 365 387 365 387 0.99

10 14 7.8e-07 0.00014 24.0 1.6 1 23 393 415 393 415 0.98

11 14 4.2e-06 0.00076 21.7 1.3 1 23 421 443 421 443 0.99

12 14 3e-05 0.0054 19.0 0.1 1 23 449 471 449 471 0.94

13 14 1.7e-07 3.1e-05 26.1 0.1 3 23 479 499 478 499 0.98

14 14 5.2e-07 9.5e-05 24.5 0.7 1 23 505 527 505 527 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0017	0.3	13.5	1.5	3	20	120	137	118	139	0.93
2	14	0.00044	0.08	15.3	6.5	2	23	139	161	138	161	0.93
3	14	8e-06	0.0015	20.8	0.4	2	23	168	189	167	189	0.96
4	14	0.00018	0.033	16.5	0.1	1	23	222	244	222	244	0.97
5	14	0.12	22	7.6	4.6	1	23	250	272	250	272	0.93
6	14	6.4e-07	0.00012	24.2	2.6	1	23	278	300	278	300	0.98
7	14	9e-05	0.016	17.5	1.7	1	23	309	331	309	331	0.96
8	14	2.4e-05	0.0044	19.3	0.1	2	23	338	359	337	359	0.95
9	14	9.7e-09	1.8e-06	30.0	0.6	1	23	365	387	365	387	0.99
10	14	7.8e-07	0.00014	24.0	1.6	1	23	393	415	393	415	0.98
11	14	4.2e-06	0.00076	21.7	1.3	1	23	421	443	421	443	0.99
12	14	3e-05	0.0054	19.0	0.1	1	23	449	471	449	471	0.94
13	14	1.7e-07	3.1e-05	26.1	0.1	3	23	479	499	478	499	0.98
14	14	5.2e-07	9.5e-05	24.5	0.7	1	23	505	527	505	527	0.98

Sequence Information

Coding Sequence: ATGGatttaacaaattataatttcgaTTTTACAATAACGTGTAGAACGTGCCTCGCCACAAATACGCATTTAAGTCCTTTAAATACAACAGAAATCggcaatattttaaattcatttattcaaatatcaataaatgatatGCTACCAAACGGAATTTGTGACCAATGTGCAATATTAGCAACTCAATGTTACAAGTTTAAAGAACAGTGTGAAAAATcggacaaaattttgcgttcctacgtagaattaaataattttaaagtagATTTAGGGCAGGACGAACAGTCAAAACTAGAGGAATTGAATTTCCTAGCTTCTAACATTTGTACAGgtACTCAAACTGATACTATTTCAAATTGTCAAATatgtaatcaacaattttcgtcgcaagatgattttaataaaCATAAACACCATTGTTGTATACATTGCAATGAATCTTTTACAAGTTCCCAATTGTTGAAAAGGCACATAAAATCGCACATGGAAAGCACTCAACTAATTTGCAGTAAATGCGGTAAAAAATTTGTCGAAAGTAATGCCTTAAATAAACATATGCAGGAGCATGAAGAAGCCAGCGATTCTTtgcAATCTGGTGAGAATTCAAATTCTGGCGCCGATTTTACAAGTTTTCTAGAAATGGATCCTCCTTCGCCGCTAGCATTTCCTTGTTCGGAATGTAATCAATCATTTAATGCCCAAGAAGATTTGGAATTGCATAAAGCGACGCATTCTACTAACGGAGAACATGTTTGCATCCAGTGCAACAAACATTTCgcaaCTCGTCAAATATTGAAAAGGCATGTAAAAACTCACATGATTCATAAGCCCCATGTTTGTAAAGAGTGCGGAAAAGGGTTTGCCGAGTCCCACGCCCTTACAAAGCACATGCGGCGCCATGCTGGTTTACCTAGAgagaaaaaacatttttgtcaGTATTGTGGACAAggATTTACAGAGCCGTTTTATTTGAATGTTCATGTGAGGAAGCACACGGGTGAGAGGCCCCTGATGTGCGCAACTTGTGGCAAAAGTTTTGCGGACCCCAGATCCCTAAAGGCTCATAATATGATACATTCAGGGGAACGCCCTTTCAAGTGTCCCGTTTGCAAcaAAGGTTTTACTCAAAGTGTGAATTTAACAAAACACATCCGCATTCACACAGGGGAACGGCCTTATATCTGTTCATCTTGTGGTAAAAGTTTCACCCAATCTTCTTCTTTGGATAAACACTCCCGGACGCATTCTGGGGTACGGCCTTATAGCTGCACTGAGTGCCCAAAACGGTTTGCTGAAAGGGGCACGCTAGTGCACCACCTTAGAACACATtcagGGGAGAAGCCCTACATTTGTGCCGTTTGCGGCAAAGCTTTCGCCAGTAGCAGTGAACTGAAATTGCACGACCGACGACAcactggaataaaaaaaaatatttgtaatatgtGTGGTAAAGATTTTGCTACACCCAGTAATTTAGTTATACATATGAGAAGTCACACCGGGGAACGACCTTTTAGTTGCCAAATTTGTAATAAAGCTTTTGCAGATAAAGGTAGCTTAAAAAAACATGTAAATAGGCACCAGGAAGCAagattaatttga
Protein Sequence: MDLTNYNFDFTITCRTCLATNTHLSPLNTTEIGNILNSFIQISINDMLPNGICDQCAILATQCYKFKEQCEKSDKILRSYVELNNFKVDLGQDEQSKLEELNFLASNICTGTQTDTISNCQICNQQFSSQDDFNKHKHHCCIHCNESFTSSQLLKRHIKSHMESTQLICSKCGKKFVESNALNKHMQEHEEASDSLQSGENSNSGADFTSFLEMDPPSPLAFPCSECNQSFNAQEDLELHKATHSTNGEHVCIQCNKHFATRQILKRHVKTHMIHKPHVCKECGKGFAESHALTKHMRRHAGLPREKKHFCQYCGQGFTEPFYLNVHVRKHTGERPLMCATCGKSFADPRSLKAHNMIHSGERPFKCPVCNKGFTQSVNLTKHIRIHTGERPYICSSCGKSFTQSSSLDKHSRTHSGVRPYSCTECPKRFAERGTLVHHLRTHSGEKPYICAVCGKAFASSSELKLHDRRHTGIKKNICNMCGKDFATPSNLVIHMRSHTGERPFSCQICNKAFADKGSLKKHVNRHQEARLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275575;
90% Identity: -
80% Identity: -