Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:66836747-66838195[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.7e-05 0.0068 18.7 0.6 1 23 71 93 71 93 0.99

2 15 2.6e-05 0.0047 19.2 1.6 1 23 97 119 97 119 0.97

3 15 4e-08 7.3e-06 28.0 0.6 1 23 125 147 125 147 0.98

4 15 0.00022 0.041 16.2 3.4 1 23 153 175 153 175 0.95

5 15 1.3e-06 0.00023 23.3 4.4 1 23 181 203 181 203 0.98

6 15 8.1e-07 0.00015 23.9 0.4 1 20 209 228 209 230 0.94

7 15 4.8 8.8e+02 2.6 0.2 5 23 232 250 231 250 0.89

8 15 8.8e-06 0.0016 20.7 2.7 1 23 256 278 256 278 0.97

9 15 6.5e-06 0.0012 21.1 2.4 1 23 283 305 283 305 0.96

10 15 0.00011 0.02 17.2 0.2 1 23 311 333 311 333 0.96

11 15 8.3e-07 0.00015 23.9 1.6 1 23 339 361 339 361 0.96

12 15 1.6e-07 3e-05 26.1 1.7 1 23 367 389 367 389 0.98

13 15 9.5e-07 0.00017 23.7 1.0 2 23 396 417 395 417 0.96

14 15 1.4e-05 0.0026 20.0 0.8 1 23 423 445 423 445 0.97

15 15 1.7e-05 0.0031 19.8 3.8 1 23 451 473 451 473 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.7e-05	0.0068	18.7	0.6	1	23	71	93	71	93	0.99
2	15	2.6e-05	0.0047	19.2	1.6	1	23	97	119	97	119	0.97
3	15	4e-08	7.3e-06	28.0	0.6	1	23	125	147	125	147	0.98
4	15	0.00022	0.041	16.2	3.4	1	23	153	175	153	175	0.95
5	15	1.3e-06	0.00023	23.3	4.4	1	23	181	203	181	203	0.98
6	15	8.1e-07	0.00015	23.9	0.4	1	20	209	228	209	230	0.94
7	15	4.8	8.8e+02	2.6	0.2	5	23	232	250	231	250	0.89
8	15	8.8e-06	0.0016	20.7	2.7	1	23	256	278	256	278	0.97
9	15	6.5e-06	0.0012	21.1	2.4	1	23	283	305	283	305	0.96
10	15	0.00011	0.02	17.2	0.2	1	23	311	333	311	333	0.96
11	15	8.3e-07	0.00015	23.9	1.6	1	23	339	361	339	361	0.96
12	15	1.6e-07	3e-05	26.1	1.7	1	23	367	389	367	389	0.98
13	15	9.5e-07	0.00017	23.7	1.0	2	23	396	417	395	417	0.96
14	15	1.4e-05	0.0026	20.0	0.8	1	23	423	445	423	445	0.97
15	15	1.7e-05	0.0031	19.8	3.8	1	23	451	473	451	473	0.97

Sequence Information

Coding Sequence: ATGTCACGTCCTGAATTTGTGTGTgtaaaagaagaaatatttgatgacaTTTCAGAACCACAAAATGAAGTGGTTGATAGTAAAGAATGcattattaaagaagaaaaaaaggAATTGGAATTGGATGATGGATTAGCGTCATTACTGCATGAAGTTAAAGAAGAAAAACCTGAATCAGATGCCACTGAAAACGAAAATATTAGCGAACAATATGAATGTGATATATGTCACGAAATTTATCCTTCTAAAGTGAAATTAAGCAGCCATATCCGCTCACACCCGAAAAaattcacttgtgaagtttgcaacaaatcattccaattatcatcatatttaaataagcataaacttatacacactgaaGAAAAACCAtacacttgtgaagtttgtaacaaaTCGTTCCGACGTCCGTCAAATTTAAAGGTGCATGAACTTAtgcacactggtgaaaaacgaTTCAATTGCGACGTTTGCAACAAAGCATTCGGTCATTTATCGCATTTAAAGATCCATAAATTTATACACacaggtgaaaaaccatttacttgcgACGTTTGCAACAAAACATTCGGACAGTCATCACATTTGAAGAAGCATAAACgtctacacactggtgaaaaaccatttagtTGTGACGTTTGCAATAAAACATTCAGAAGCTCGTCGAATTTAAAGGCGCATAAAATTATACGCACTTGTGAAAAATCATTCCGAGAggcaattaattcaaaaattcataaacttatacacacgaCCGAAAAACTATTTACTTGTGACGTTTGCCACAAAACATTTAAACAGTCATCACAATTAGACGatcataaacttatacacaccaAAAAACCATTTAATTGTGacgtttgcaacaaatcattcagcaGGTCAACTTATTTAAAGAACCATAAACTcctacacactggtgaaaaaccattcgcttgtgaaatttgcaacaaatcattcgcGGAGCTGTCAGTTTTGAAAAACCacaaacttgtacacactggtgaaaaaccattctcGTGTGACGTTTGCAACAAAGCATTCAGTAATTCATCAAACTTAAAGACTCATAAATTTATACACACAGGTGAAAAACCATACACGTGTGacgtttgcaacaaatcattcagacaatcttcatctttaaataatcataaaaatgtacacactggtgaaaaaccatccACTTgtgatatttgtaataaatcattcagcAGGGCTTCATATTTAAAGAgccataaacttatacacactggagAAAAGCCTTTTAGTTGCGATACTTGCAACAGATCATTCAGGGAGCTGTCAGATTTGAAAAAGCATGAAATTGTACACACTGATGGAAAATCTTTCAATTGTGacatttgcaataaatcattcagacattCGCGGACTTTAAAAGTgcataaaatttcgcacaataCTGAAAACACAGAAACCAACatgtaa
Protein Sequence: MSRPEFVCVKEEIFDDISEPQNEVVDSKECIIKEEKKELELDDGLASLLHEVKEEKPESDATENENISEQYECDICHEIYPSKVKLSSHIRSHPKKFTCEVCNKSFQLSSYLNKHKLIHTEEKPYTCEVCNKSFRRPSNLKVHELMHTGEKRFNCDVCNKAFGHLSHLKIHKFIHTGEKPFTCDVCNKTFGQSSHLKKHKRLHTGEKPFSCDVCNKTFRSSSNLKAHKIIRTCEKSFREAINSKIHKLIHTTEKLFTCDVCHKTFKQSSQLDDHKLIHTKKPFNCDVCNKSFSRSTYLKNHKLLHTGEKPFACEICNKSFAELSVLKNHKLVHTGEKPFSCDVCNKAFSNSSNLKTHKFIHTGEKPYTCDVCNKSFRQSSSLNNHKNVHTGEKPSTCDICNKSFSRASYLKSHKLIHTGEKPFSCDTCNRSFRELSDLKKHEIVHTDGKSFNCDICNKSFRHSRTLKVHKISHNTENTETNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470517;
90% Identity: iTF_00470517;
80% Identity: iTF_00470517;