Dqua010971.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- egg
- Assembly
- GCA_963989225.1
- Location
- OZ022325.1:68051202-68059150[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 2.7e+04 -3.3 0.0 38 58 337 357 335 365 0.85 2 2 4.4e-13 4.4e-09 37.7 0.1 5 70 707 765 704 768 0.90
Sequence Information
- Coding Sequence
- ATGTTAACATTAAAGAAGTACAAAAAGAGATCGATGAAATTTATGCCTAGAGCGTCCAATAACCTCACAAACATGAACAACGTCGTCGATTTAGAGACTCCAGATGATAACCCTGATAATCCTGATGTAATAGTGTTGAATTCACCGGATGATGATAAAAAGAATGCCGAACCGGCTGAAGTTATAGATTTGGATAATTATGACGCCACCGGGAAAAAGAAGCGGAAACGTGAATCGTGGAATAAATGCGTTAATATTGAATGCGAATCGGGGGAAGGTATGCGTCCAGCGACGATATTTAGCTTGAATTTTTATCGGGTTAAAGTTAGACCCAACAAAAACCAGGAAATTTGCGAGGAATGTTACGAAAACAGCGTGCAATATTACGAGGAATTATCAACTGCGTTGACAAATGGCGAATGTGTCTTCTCAAAAACAGTTCCAGTTCACGACGAATACGTCGAAATTGATTCCGACGATTCAGAAGGCGAAGATGTTGTTGATATTTGCGTTTCCGGGGTGACATCTTGTCAAATATCAGACGAATTGCACGGTTTCGTAGCAACTGATTTGACACCTCTAATAAACAGCACACTTGAAAAATGGAAATTGGACGATCAAGTTGACAGCGCTTTAGATGTGATTAATATGAGGCACAAAAAGGTTGAAGAAGGTTTGGAGGCATTAATGAATGATGAAAAGCATTTACAAAGAATAATTGATGCTGTGCGGtcaaatttatataaagaaTTCCAAAAACCAATCCACGAATTGCCTCCTTTGGAATTATATTCCCATGCTCCTGCTCCAATTTTACCACCCGCCCCTCTGTCACCTAGAAAGGATCCCGAAAGGCGTTCGCATCGGAATATTGCGAAACCGGCCACCTATTGCGAATTATTAGACGATGAGGCGAATTTAACTGAAATAACCACCGAATTAACAACAACTGGATTACCGGAAGATACTTTACAACCAGGTTCTATTTTGCCGCATACAAATATTCCCCCAGCTGGAAAATTAATCAGAATTAGGCCCAATACTGGAGAATATTATTTTGCACAAAGGCAATCAGTTTTTGGTGCTTGGGGAAAAGTAAAACTAATTGAAATTGAAACCgaacaaaattatcaaaaaattattgcagATGATCCGTCAAAATCAAACCCCGAAGATTCGCCGCAAAACACTCTGGATCCGCTGACAGGAAGTAACcccaattatttatataaagttAGATTTGATGGGAAAAAAACTATGCAAAAATATGTAAATGGCAAACAATTGGCGTACGCTGTGCCAGCTTCTGTCCGTTTGGAGGTCGGTACGCGTGTTATTGCTgtttttttggatgaattgtCGTCCAAAAGGGAATCGTATTATGCTGGAATTATTGCGGAACCTTTATCACCCGAAAATCATTACAGatatttgGTATTTTTTGATGACGGTTACGCCCAGTACGTGTACCACGAAAAAGTGTTAGTAGTTTGTGAATCATCCAAAAACGTTTGGGAAGACATTCACCCAgattcacaaaatttcatccgAAAATACTTGGAAACTTATCCACAACGTCCGTTAGTTAAAGTCAAACCCGAACAAGTCGTCAAAACTGAGTGGAACGGGAAATGGTGGATTGGAAGGGTGCTTCGAGTTGATTGCAGTTTGGTGCACATGTATTTTGATGCGGACAATAGAAGCGAGTGGATTTATCGGGGCTCAACCAGATTGGGGCCACTATTTTTagAGGTGCAAGCAGCAGCTGCTCGGCAAGAAAAAGGTCCCCACCTTCCAAAACTTCAACGAACTTCTTTGCACAGTCCGCAGCCGTATGTGGAATACCCAAAACCTGCTGGAAGTGACCCACCAGCAGCTGACGGCCCTGTAATACCCCGAGCAGTCGCTAGGAAGTCGACTAACAGGCCGCCGAATACCTTACCGCCTACTTTGAATTATGTGCCGTTTTTGCCGACGCAACAAGTGCAACAACCACAAAGCAAAGTTGTGTACTTTACTCCTAAAAGTATAATCGCCCCAAAAGCGTACACGCCGCACACATGCGGAAAAGAGTGCGCCAAATTAATTACCCTACCTTTATCAGCCTTAAAAGGCTACAACCCTCTTTCTAAACCACTGTTAGTAGGGTGGCATCGACAAATGTTTAAATATAAAGGCAAAAAGGGTATTAGGTATCGGGCCCCGTGCGGCAGAACAATCCGCAACATGCCTGAATTGCATAAATACCTCCGTTTGACACACAGCGAATTGTCCGTCGATAATTTTGACTTTGATTTTTGGGTGCACACTTTGGCTGAATTCGTTTTGGATAAAACTTTTAGGAGTAAACGAGATATTTCGAGCGGAGTTGAAAATGTCCCGATTCCGTGCGTCAATTACGTTGATAATTCTTTACCTGATTTTTTGAGTTATTCCACTAAAAGGGAACCGAAAGAAGGCGTCAATTTAAATTTGGACCCGGAATTTTTGTTTGGATGCGATTGTACTGATGATTGCAGCGATAAATCTAAATGTTCCTGCTGGCAAATGACCATTCGCGAGGCCAGGACGCTCAATAAAAGAGTCCCCGATGAACTAAttggATATTCGTACAAAAGGCTTCCAGATTGCGTTACAACTGGTATTTACGAATGCAACTCGCGCTGCAAATGTGCCCACACTTGTTTAAACCGCGTGGTGCAACACCCTTTACAATTAAAACTACAATTATTCAAAACAGCCAACCGTGGTTGGGGGATCCGCTGTTTAAACGACATTCCACATGGAGCTTTCATTTGCATTTACGCTGGTTCCTTATTAACAGATAAAATGGCAAACGAAGGCGGAACTAATTACGGGGATGAATATTTAGCCGAATTGGATTACATAGAAGTAGTAGAAAGACAAAAAGAAGGTTACGAATCTGATTGTACTGATTTAGAAGAAGAAAGCGATAAGGAGTCGTCCAAAAGCAGCGATAAAAGCGAATATACTTCAGACACTGAAGGAATGGAATCATTTAAAACCAACAAAtacaGCATCGATTTGGCCTTTCGTTCTAAGGCCAAAATAACTCCAGGATCCAACGTCACAACTCGCTCCAAAATCAAATCAACTCCTTCAGAAACCCCGCAGGATACCGTCACAATTTCCGACGACGAAGAAAACGTCCGCGAAAAATCCTCCTTCGCCCCGAGATCATTAACCGAAGAACAAGTCCcccaatctaaattcaaatccGTGCGCAAAATGTTCGGCGAAAATGAAGTTTGTTACATAATGGACGCCAAAAACACCGGAAACATCGGACGATTCCTCAATCATTCATGCAGCCCAAATGTTTTTGTGCAAAACGTTTTTGTTGATACTCACGATTTGAGGTTTCCGTGGGTGGCGTTCTTTGCCATGAGTTATATCCGGGCGGGGACGGAATTGACTTGGAATTATAATTATGATGTTGGGAGCGTGCCTGGGAAAGTCATTTTTTGTCACTGTGGCAGCCCTGATTGCAGAGGAAGATTATTATAA
- Protein Sequence
- MLTLKKYKKRSMKFMPRASNNLTNMNNVVDLETPDDNPDNPDVIVLNSPDDDKKNAEPAEVIDLDNYDATGKKKRKRESWNKCVNIECESGEGMRPATIFSLNFYRVKVRPNKNQEICEECYENSVQYYEELSTALTNGECVFSKTVPVHDEYVEIDSDDSEGEDVVDICVSGVTSCQISDELHGFVATDLTPLINSTLEKWKLDDQVDSALDVINMRHKKVEEGLEALMNDEKHLQRIIDAVRSNLYKEFQKPIHELPPLELYSHAPAPILPPAPLSPRKDPERRSHRNIAKPATYCELLDDEANLTEITTELTTTGLPEDTLQPGSILPHTNIPPAGKLIRIRPNTGEYYFAQRQSVFGAWGKVKLIEIETEQNYQKIIADDPSKSNPEDSPQNTLDPLTGSNPNYLYKVRFDGKKTMQKYVNGKQLAYAVPASVRLEVGTRVIAVFLDELSSKRESYYAGIIAEPLSPENHYRYLVFFDDGYAQYVYHEKVLVVCESSKNVWEDIHPDSQNFIRKYLETYPQRPLVKVKPEQVVKTEWNGKWWIGRVLRVDCSLVHMYFDADNRSEWIYRGSTRLGPLFLEVQAAAARQEKGPHLPKLQRTSLHSPQPYVEYPKPAGSDPPAADGPVIPRAVARKSTNRPPNTLPPTLNYVPFLPTQQVQQPQSKVVYFTPKSIIAPKAYTPHTCGKECAKLITLPLSALKGYNPLSKPLLVGWHRQMFKYKGKKGIRYRAPCGRTIRNMPELHKYLRLTHSELSVDNFDFDFWVHTLAEFVLDKTFRSKRDISSGVENVPIPCVNYVDNSLPDFLSYSTKREPKEGVNLNLDPEFLFGCDCTDDCSDKSKCSCWQMTIREARTLNKRVPDELIGYSYKRLPDCVTTGIYECNSRCKCAHTCLNRVVQHPLQLKLQLFKTANRGWGIRCLNDIPHGAFICIYAGSLLTDKMANEGGTNYGDEYLAELDYIEVVERQKEGYESDCTDLEEESDKESSKSSDKSEYTSDTEGMESFKTNKYSIDLAFRSKAKITPGSNVTTRSKIKSTPSETPQDTVTISDDEENVREKSSFAPRSLTEEQVPQSKFKSVRKMFGENEVCYIMDAKNTGNIGRFLNHSCSPNVFVQNVFVDTHDLRFPWVAFFAMSYIRAGTELTWNYNYDVGSVPGKVIFCHCGSPDCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -