Dpla000853.1
Basic Information
- Insect
- Drepanosiphum platanoidis
- Gene Symbol
- dmrta2
- Assembly
- GCA_948098885.1
- Location
- OX402533.1:20490139-20490948[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 1.6e+04 -9.5 6.7 12 21 12 21 7 27 0.55 2 2 2.3e-12 1.2e-08 34.5 18.9 2 47 69 114 68 114 0.90
Sequence Information
- Coding Sequence
- atgccggccagcagacaccagcaacacaggcaccaccaccagcaccagcaccagcagcaccagcagcaccagcagcagcagcagcagcagcagcagcagcagcagctcgttcaacagcaggtgacgtccgcggcggcggccagcccgactacttcggtcgcgtccgcgggcccggcgtcggcggcggcggcgcacaaggagaaacagcggctgtgcaccaactgcaagaatcacgacCTGCGCAAGGTGTGGAAAAAGCACAAGCGCTATTGCAAGTACCGCGACTGTGCGTGCGCCAAGTGCATGAAGACCGCGGCCACGCGCAAGAACTGCGCCGAGCAGACGGCCAAGCGGCGGGCCCGGCAGGAGGACGAGCAGCGCGAGCACGAGCTGCAGCTCAACCCGTCGCACTTTGACGACGAGCGCCCCATCCCGTACGACCCGCCCGCGCCCGCCGCGGCCGCGGTGCAGCAGCCCGACTCGTCCTTCTCGGGGCACCACCGGCGGCGCGGCGCCAGCATGTCCACGTCGGCCAGCACGGTCAAGGAGTCGCCGGCGCACACGTCCTCGGACTACGACGACACGTCGTCCCTGGACCCGGGCGGCGGAGGCGGTGGAGGTAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCAGCGTGTCAGCGGTCCCGGAACGGAGCGCCGCGGGGCGAGCGGCGTCGGGCGGCGGCGGTTCCATTTCGTACGTAGATTTCGACGCAGGTAAGCAACATCGTGTAGTCCAGAGTCGAGCGATAACGTCTCGCGTCGCCCGCGGGCTTTCGACGCGATAA
- Protein Sequence
- MPASRHQQHRHHHQHQHQQHQQHQQQQQQQQQQQQLVQQQVTSAAAASPTTSVASAGPASAAAAHKEKQRLCTNCKNHDLRKVWKKHKRYCKYRDCACAKCMKTAATRKNCAEQTAKRRARQEDEQREHELQLNPSHFDDERPIPYDPPAPAAAAVQQPDSSFSGHHRRRGASMSTSASTVKESPAHTSSDYDDTSSLDPGGGGGGGSGGGGGGGGGSVSAVPERSAAGRAASGGGGSISYVDFDAGKQHRVVQSRAITSRVARGLSTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -