Dfal015126.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000066.1:1741516-1750257[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.7e-05 1.9 8.8 0.0 24 50 34 63 29 65 0.79 2 4 0.00052 10 6.5 0.0 23 48 107 135 101 137 0.75 3 4 0.00059 12 6.3 0.2 37 48 274 285 259 291 0.74 4 4 0.0019 37 4.7 0.2 26 48 470 493 467 495 0.85
Sequence Information
- Coding Sequence
- ATGGAGTCCGACAGTGAAGTGCCAGGGGTGTCAAATCAAACTCCGAGCCGGAAGAGTTCCGTGTGGAAACATTTCGACATTGTTGATAATGACAAAAAACTAGCGTCGTGTGGTATTTGTAGGAAAGTGTTGTCTTTTCGTACAACTATCTCAAATTTGAAGAAGCATTTTGACTTAAAGCACATTGCTACTCATGACGAATACGAAAATGATGATTCCGGGGACGACTCAGTCGATGAGTGCACCAAACCGGTGCATGACATCCAAAAGCGCAGGAGCTCCATTTGGAAATACTTCTCGGTGGCTGACAAGACGGCCAGGAAGGCTACATGCAACTCCTGCTACGATGCCTTTTCATATAAAACTTCAATAACAAATCTTAAGAGACATTTGTATCATAAGCACAAGGATTTATATATAATGACCACATTCCGGGATGACAGTGGCAAGGAATCGGATAGCGATCTAGTTTTTGGAAATGGCATTGTATTCGTTAGCCATTCTAACAATCGGAGAGTGCTTGCCGAGGTTGGTTCTACATTTGGGGATTGCGAGCAGAGGGCAAGGGTGTCGTGGCATTCTATGTGGTACTTTTATGGATATTTTACGCAGCCTGTGCATAACGATAAGGAACAGAAGCTACTGACGGCTGAATCTGATGAGGAAAGCAGCGATTATGATCTCCAATTTGAAGCTGATGAAGATGATGGCAAGCCGCCCAACCGAAGAGCATCAGCGTGGTACTTCTTCAAGTGCCTGGACCCAGTCCTCAAGATATCTCAGTGCCTCATTTGTAAAAGAAGACTGTCTTTTGTAACCGTTTCTAACCTGAAAAGGCACTTGGAGAAGCGACATCCCAATGCCATGCCTCAACTGAAAGATGGGACTGAAATCATAATAGCGGCCGATGGACAATTCTACGAGGTTGAAAGGAACAGTTCTAAAAACGATAACGAAGACAACGATCAGAACATACCAGAAATAGATCCTATTTGCTGCGAAGATTACGAACAAGATCATACAATTGAAATGAAACCGCTCAAAAAAAGGAAAACTGCTAAAAATAGCAGAGAAAATCGCTGGAATAGCAACTCGGATGACGACGCTAACGGAAAGAAACCTACCATTGACAAGCAAGATTCTTTGAATTATTTCGCAAATTATGTCACGTCACTATTAAGACAACTTCCGAAAACGATATCGGATCAATTACAATCCGACATCATTAAGCAGATCATGACTGCTAAAATATCGAATGAATTGACGGGATCCGCTACTGCTATTCCAAGTAGCAGCTATTCGATAACTATTACTAGTACAGAAAAAGATCGTGTCGATGATGTCGATAGCGACGCACGTGTTACGTCAGCAATGTGGGGATACTTCGAGCTGGAGGCTGGACGAGTGAGGTGCGTCGTATGCCGAGCAGTTTTCGATAATAGCTCAGCGTTATTGAAGGAGCATATAGAAGAAAGACACCCTAAGCTGCTCGCTGATATTGTACAGATTCCGGAGGAAGACTCAGAGATCGAGGGCGACCTCGATACCTCTGTACCTCGTACAACATACACTGAAATCGTGTATTTGGAAGACGAAGTCAAAAGGGAGTCACCCAAAAAGCTAGAAAGATCAAAGACACGTCAAAGAAAACATCTACCCAAAAAAAGAATTGAAAAGCGGAATGATTCAACCTCATCTGACGAAGTTGGCGTAAAGAAACACAAACATTCATCCAACGACGAAGAATTAGATTCCTTTATCAAGTACATTACTTGCTTACTGAAGCACATACCGAAACATCAATTCGCAAAAGTGCAAATGGACATCGTTCAAACAATTATGAACGCCAAATTGCAAACTCAAAACGTCATAAACGAAGCTTTGAGTCGCGTAGATAAAAATCGCAGTGATTGTAACACTGCTATTGATGACGTCAAATTGCTACACAATGCGCGAATACCGTTAACGAATACCGTTGCTACTGGCAGCGCGTCACTAAATGATATTGACAGCAATAACGAATGA
- Protein Sequence
- MESDSEVPGVSNQTPSRKSSVWKHFDIVDNDKKLASCGICRKVLSFRTTISNLKKHFDLKHIATHDEYENDDSGDDSVDECTKPVHDIQKRRSSIWKYFSVADKTARKATCNSCYDAFSYKTSITNLKRHLYHKHKDLYIMTTFRDDSGKESDSDLVFGNGIVFVSHSNNRRVLAEVGSTFGDCEQRARVSWHSMWYFYGYFTQPVHNDKEQKLLTAESDEESSDYDLQFEADEDDGKPPNRRASAWYFFKCLDPVLKISQCLICKRRLSFVTVSNLKRHLEKRHPNAMPQLKDGTEIIIAADGQFYEVERNSSKNDNEDNDQNIPEIDPICCEDYEQDHTIEMKPLKKRKTAKNSRENRWNSNSDDDANGKKPTIDKQDSLNYFANYVTSLLRQLPKTISDQLQSDIIKQIMTAKISNELTGSATAIPSSSYSITITSTEKDRVDDVDSDARVTSAMWGYFELEAGRVRCVVCRAVFDNSSALLKEHIEERHPKLLADIVQIPEEDSEIEGDLDTSVPRTTYTEIVYLEDEVKRESPKKLERSKTRQRKHLPKKRIEKRNDSTSSDEVGVKKHKHSSNDEELDSFIKYITCLLKHIPKHQFAKVQMDIVQTIMNAKLQTQNVINEALSRVDKNRSDCNTAIDDVKLLHNARIPLTNTVATGSASLNDIDSNNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00468326;
- 90% Identity
- iTF_00468326;
- 80% Identity
- iTF_00468326;