Dfal003315.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drepana falcataria
Gene Symbol
-
Assembly
GCA_945859695.1
Location
CAMAOO010000013.1:3821646-3825054[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.013 0.79 10.4 6.1 1 23 138 161 138 161 0.97
2 16 0.00043 0.026 15.1 0.2 3 23 172 193 171 193 0.97
3 16 0.012 0.72 10.6 0.3 2 23 206 228 206 228 0.97
4 16 0.00038 0.024 15.2 1.1 1 23 237 260 237 260 0.97
5 16 0.00012 0.0074 16.8 1.5 1 23 272 295 272 295 0.97
6 16 0.00015 0.0093 16.5 0.6 2 23 325 347 324 347 0.96
7 16 0.00079 0.048 14.2 1.6 2 23 357 379 356 379 0.96
8 16 0.05 3.1 8.6 0.6 3 19 385 401 384 404 0.93
9 16 0.00075 0.046 14.3 0.5 2 21 409 428 408 431 0.94
10 16 1.2 74 4.2 1.6 3 23 441 462 440 462 0.90
11 16 0.00059 0.036 14.6 2.9 1 23 467 490 467 490 0.94
12 16 0.00013 0.0079 16.7 1.7 2 23 502 524 501 524 0.94
13 16 0.016 0.96 10.2 0.8 1 23 547 570 547 570 0.94
14 16 0.0069 0.43 11.3 1.1 2 23 604 625 603 625 0.97
15 16 0.017 1 10.1 0.1 1 23 691 713 691 713 0.97
16 16 0.072 4.4 8.1 1.9 1 23 719 742 719 742 0.97

Sequence Information

Coding Sequence
ATGGCAAGCCAAGAAACAAAAACGGTATTGGACTCCCGCAAGGACCCAACTTTGTTTCTGCCTGACGAGCCCATGAGCTATGAGATTAAAAAGAAGAAAAAAAAGAGAAAGCGGACACAGGAGGACCCATTGAGAGAGAATAAGGACGAGTATGTAACATCCATAGTACCAGGGTTGGACCCCGAAGTCAATATCAAGGTGGAGAATATTGAAGTGGAACTGGATTTTAATGATTTTGCAGACAACACAGGCTTGATGGTGGAAGGTCCTCACAGTGAAGACAGCCAGGAGCCAGCTGTAAAGATTGAGCAACAAAACCATGAAGCAGTCCTACTTACCTTTGAGAGTGTAATCAATGACAAGCAAGACTTCAACTATACAGAAGGGATGCTTCCAGAATTGGCACCCACGCATGTCTGCAAAGTGTGTCATCTAGTCTTCCAGTCTACGAAAACCCTTAAAATGCACCAGAAAAGAAAGCACAAATCTTTTAGAAAGTCCTTCAAGAATATCTGCGACTATTGCGGCATGTCATACGAAATGAAGAACAGCTTGGTGGCACACATAAAGAGGAAACATGGACCAAACTCTTTGCCTGATGACAGAGAGGAACGTACTTGTGAAATTTGTGCTCTAGTGTTTAAAGGTTTGCCCAGGTTGCGAATGCATATGAGAAGGAAACACGATGCGTTCGAAGACACATTCAAATATGCATGTGATCACTGCGGACTCACCTATGACAAATATAGGAGTTTGATCGTCCACATACAAAGGAAGCACTCTGGTGTGACCAAGCCAGAAGTGAACCAATGGTACAACTGCCCGTTTTGCCCTAAAATCTTCTCCAAAAGAGAGACTTACTCGAGACATGTACAAAGGAATCATAAAATAGAAGATGAAGACAATGTGAAAAAGGAATCGGAGCTGAGTAAGGACTTAGAGGGAAGTAAAAATGCCCAGACAGGGGAAATTTCCTGTAAAGAGTGCCCCTTAGTTTTCTCATCAGTCAACTTTCTAAAACTACATATGAGACGGAAACACAACGCTCTGAAGGAAGATTTCCGGTTGAAGTGCCGGATATGTAATTTGTCATACAACAAAATCGAAAGCCTAAAGCGACACGTGCGTAGAAAACATGACAATAGTTCCTTCTGTGAGGTGTGCAACAAAAACTTTGACAGCAAAGAAGCATACCTCTCCCATTCTCATGTGAAGGTGATAAAGGAGTGCTCAATTTGTGGCTTGATCTTCGCTTCCCAGGGCGGGTTGGCCAAGCATCTGAGGTGTACGCACAAGATAGACACTGCCAAGACTGTGTTCTGTAGTATATGCAACGAAGGATTCCACAATATGCGACAGCTAAAGCCACATTTTTTAAAAGTGCATTTAAAAGTGACGTACACATGCATGTATTGCAAGCGGGTTTTCAAGGCAAAGGAGAGCTACAGACGACACATATTATTCAAACATCCTGTTAGCAACTACGGGGGTCGAGAGATGCAAAAGTGTGAACAGTGCCCTGAAACTTTCAAGGACGAATTTGACCTCTGCCGCCATATTAACTTTGTGCACGGTAGCGGCGACGCGTCCAACACAGGTGTTGCTATAAAAGTAGAAGAACAAGATGTAAAAGATTCATTCCAATGCACAAGGTGTCCAGATCTTTTCATGACATGGGATAATTTAAAAACACATTATGAGCAAAATCATCAGCTGACTAACAAAACGCAATGTCAGATGTGTGGAGACTTAATACCTGTCAATGATCTAGATAAACACATTAAGAGTACACACACAGACAACACGATGCAGTGTAAATATTGTGAGTTCAAAACCGACGTGAGAGTGAGTTTGACTCAACACATGCTGCGGCATAAGAATGCCAGCACCATGAACTGTGATTTCCCAGGTTGTAAATACAAGACTTTTTATGAAATTGCGATGGAGAAACATAAGAAAAAACACATAGACCAGGGCGTAAAGCTGCAGTGTACACAATGCAGTTTCCAAACTATGAATAAATATATACTAAAGTATCATGAAGAAGCGCACGAAACGGGCAAAAAGCGATACATGTGCGACCAATGTGACTACGCGACTATTCTACCAGCGAACTTGGTGCAGCATAAATATAAACACTCAGCGGAAAAGAGGTTTAAGTGCGAAGTGTGCCCGTTTGCAACCAAGTACAACACCTCCCTACGGTTTCATGTAAGGAAGAAGCATTGCGATCTCCCTACGGTCAGTTAA
Protein Sequence
MASQETKTVLDSRKDPTLFLPDEPMSYEIKKKKKKRKRTQEDPLRENKDEYVTSIVPGLDPEVNIKVENIEVELDFNDFADNTGLMVEGPHSEDSQEPAVKIEQQNHEAVLLTFESVINDKQDFNYTEGMLPELAPTHVCKVCHLVFQSTKTLKMHQKRKHKSFRKSFKNICDYCGMSYEMKNSLVAHIKRKHGPNSLPDDREERTCEICALVFKGLPRLRMHMRRKHDAFEDTFKYACDHCGLTYDKYRSLIVHIQRKHSGVTKPEVNQWYNCPFCPKIFSKRETYSRHVQRNHKIEDEDNVKKESELSKDLEGSKNAQTGEISCKECPLVFSSVNFLKLHMRRKHNALKEDFRLKCRICNLSYNKIESLKRHVRRKHDNSSFCEVCNKNFDSKEAYLSHSHVKVIKECSICGLIFASQGGLAKHLRCTHKIDTAKTVFCSICNEGFHNMRQLKPHFLKVHLKVTYTCMYCKRVFKAKESYRRHILFKHPVSNYGGREMQKCEQCPETFKDEFDLCRHINFVHGSGDASNTGVAIKVEEQDVKDSFQCTRCPDLFMTWDNLKTHYEQNHQLTNKTQCQMCGDLIPVNDLDKHIKSTHTDNTMQCKYCEFKTDVRVSLTQHMLRHKNASTMNCDFPGCKYKTFYEIAMEKHKKKHIDQGVKLQCTQCSFQTMNKYILKYHEEAHETGKKRYMCDQCDYATILPANLVQHKYKHSAEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00467624;
90% Identity
iTF_00467624;
80% Identity
-