Basic Information

Gene Symbol
-
Assembly
GCA_945859695.1
Location
CAMAOO010000015.1:1926328-1935297[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0036 0.22 12.2 1.0 3 23 210 231 209 231 0.96
2 23 0.25 16 6.4 0.3 1 22 611 632 611 632 0.95
3 23 4.9 3e+02 2.3 0.3 1 22 676 697 676 699 0.82
4 23 0.0066 0.4 11.3 1.5 3 21 710 728 710 729 0.96
5 23 0.57 35 5.2 0.0 3 23 738 759 736 759 0.88
6 23 0.013 0.8 10.4 0.2 3 23 780 801 778 801 0.96
7 23 0.0029 0.18 12.5 2.3 1 23 807 830 807 830 0.95
8 23 0.092 5.7 7.7 0.0 1 23 855 878 855 878 0.90
9 23 0.014 0.85 10.3 3.4 1 23 883 905 883 905 0.97
10 23 0.014 0.86 10.3 0.3 1 23 911 934 911 934 0.95
11 23 0.0017 0.11 13.2 1.3 1 23 947 969 947 969 0.97
12 23 0.00013 0.0081 16.7 1.8 1 23 1018 1041 1018 1041 0.97
13 23 0.00055 0.034 14.7 1.2 1 23 1100 1123 1100 1123 0.96
14 23 0.00068 0.042 14.4 2.0 2 23 1150 1172 1149 1172 0.95
15 23 0.0049 0.31 11.7 0.4 2 23 1178 1200 1177 1200 0.96
16 23 0.0073 0.45 11.2 0.2 1 21 1244 1264 1244 1265 0.95
17 23 0.00091 0.056 14.1 0.6 1 23 1275 1297 1275 1297 0.93
18 23 8.2e-05 0.0051 17.3 0.3 2 23 1380 1402 1380 1402 0.93
19 23 8.4e-07 5.2e-05 23.6 1.3 3 23 1409 1429 1408 1429 0.98
20 23 0.011 0.69 10.6 0.2 1 23 1449 1471 1449 1471 0.97
21 23 0.11 6.5 7.6 0.0 1 23 1495 1517 1495 1517 0.98
22 23 0.02 1.2 9.8 0.6 1 23 1523 1546 1523 1546 0.95
23 23 0.00019 0.012 16.2 0.4 1 23 1554 1577 1554 1577 0.96

Sequence Information

Coding Sequence
ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCATCCTAGCATCGAAAATCAGGGATTGCGTGTCCGTGCAGATAAACGAAACTGACGAACTGCCGACAAATGTCTGCAAGAAATGCGTGGACAACGTAAACAACTGGCACTTATTCAAGGGTGTATGTGAAAGGAGTCAGGACAAACTACAGACCTTGATTAAAAAAGATGGCAGCCAACTAGAAGATGAAGAGGTAAATATAAAGAGTGAGCCACTGTCTGATGAAGCATATGATGATGGGGTGGTTATTGATGGCTCTTACCCTGACAGTGAGAATGCAAGCTCTACTAACAAGCTCCAACCAGAAGGACCTCCAATATTGGCTTCGCTGGGTCTCACACCAAGGAGTGATAAGGGAATGGAGAGTGATAAAGACGAAGATGATGAAGAAGAGGAGGAGATGAATGAGCCAGTGCAAAAGTACGCGAAAGTTCCCAACATGCCAGAGGTGTCAATAACAGTGATGCGACCTTCTGGTGAGACGCTTCATGCGCGGCAAGGTATCCAGCAGCTCGCCTCCAAGGACTGCCTGGTGTGCGGCCGCTCCTACCGGTACTCCCACAATGCGCGTCGGCATGAGCTCACAGCCCACAGCTTCGACAGATACACCAACAAGGTAACCAATAAGAAGGCCCATGCGCACATGCAACCAAAACTAAGACCCAACCCATTTAACCCCAAAGCTAGGCTCATGCCTAATCCAATCAGCCACAAGATGCAATTCATGCCCAAGATAATACCATCCAGAGTCGTCCCGAACAAGGTTATCTCACCACCCAAACCTGTACCCATAAAAACTTTAAAGGGCTCCCAGAACAATTTGCCGTATCCGTTGCGAATTAAAGCTCTCAAAGATCTTCAAATTAAAAAGAAGGAGCCTCAAATTCTGAAGACTTTACTCACGTCGAAGCCAGAGGTCCTGGTTTCGGAGCCAGAAATAATCAACTCGGGCCCGGAGAGTCCTGAGACACTGATTTCTGAACCGGAGATTGCGTCATTTCAAGTAGAAGCGATTCTTTCCGAGCCCGATGCCTATGACCAGCAGGGTGAAGATGAAATGGACGGGGAGATGCAAAATAACCAAAGTCACAACTACGACACTGTCGATATGGAGTCGGACAACGAGATTGAGATCGCTCGGCAACACGGGCAGGGTGGTGAGGGAGAGGGTGAGGACCACAATGACAACGAGGATGGTAATCATGATGATGACAATAACATGGAAGGCCCTCACAGTGACAATGAGAAAGATCACGATGATACTGCCGAGAGTCAAGAAAATATGGAAATGGACACTGAAATGAAGGGCGATGACGACGCCAGAGAGGGTGAAGAAGGCCATGAGGACAAGGAACACGATGACCACGATGCCAATAATGAGGACAATGACGATGACTTTGACGACGATCTCCCGCCACTTGATATAGCTCCGGTTGTCGAGATCAATGAAGATATGCAGACAAACTCCTATAACAGTGAAATGAACGAAGAAGATGAAGATCTCGATGAGACCGCTGCCCACGACGACACTGTCGATGGAGAAGTCGGCGAGAAGGAACTAGATCCAGACAAAATATACATAACTAGAACACAAAGGGATTTCATTCAGAAATATCGTGATGTTATCCTACAGATAAATACTAAGCGCTGTGTTTGCTGTGACAAAGAGCATCCTCGCAGAAAGGCCGTCATCCAACATCTACAGAAAAATGGCCACAAAGTTCCAAAACACACGTGCTACAATTGCGTAGTCACCTTTGGCCATATTGGTGCTCTGCTTAGTCACATGAGGTCGAACTCTTGCACCGACCTGTGGAAGATTATTTACAATGAGAATGGAATCACTGATGAAATGGTTATCGAAGACGAGCCTAAAGATGATAACAAAGCACAACAGTATAAAGATATTTTGAACGCTAGATCGTACGCCTGCAAACTTTGCCCAGCTAAGTTCCAACTGAAGCAATTTATTATGAAGCACGTTCTCGATGTCCACGAGGACGGCCAGTCTCGAGTGCCGCTGGGCTGCGTGCACTGCCGCGCCAGATACAAAGACAAAAGTTTACTGAAGAAACATATTCGTAACGGAGAATGTACTGTTTACATAGCTTGCGAGCTGTGTACGGAGAGATTTGTCAATCTTCAGGATTTCAGTGATCACGCCATCGGCGTTCACGCAGGCAACTACGACCAGTCTGATAATCAATCCAAGTGCGTCGACGGTCGCCCGACAGATTGTCCATTGTGCGGCAAGAAGAACTCCAGCTACCCGAATTTGGTGAAACATCTGAAGATAATACACAGCGAAGAAAAGCCGCATTACTGCCAACACTGTGACGCCAAGTTCGAGCAAACCGCGGAACTTAACCAGCACATTTATATGGAACATTCGGATAGAACTCTGGGTGTCAACGTGGAGCCCGACATGTCTCTGGTGAAGGAAGAGGCGGAGGAGTACCACTACTCGTGCACCGAGTGTAATGCTATATTCGAGACCGTCGACGCGTGGACGGATCATCAAGTGGCCGAGCACAATCAGGTGGCGCACCACTGCGACCAGTGCGAGAAGAAGTTCTTGCGACCCTCTGAACTAGCTGAGCACAAGAACACACATTTGCGAGTTAAGTTCTACCCTTGCAGTGTCTGTTCCAATTCTTACAGCACCCCACAAAAACTCTCCGAACACGTGCAACAGTCGCACCCGGGGGCCGCCGCCCAGGCCGCCATTGATTCCGAATTCTTCTGCGATATCTGTATCCGATCATTCAAGAGTCGCCAAGCTTACTCGAATCACATGCGCATTCACGCCAAAATACCTACTACGAACAGAAAGCCTGGCGAGACTAAAGGATTCGCTCCGCAGATAATTGGAAAACCTATAAAACAGTTCGCTATGGTCCAACCCAGCATTGTGTCATTCAATCCTAGTTACAACGTCCCGAACGCGCCGTACTCGTGCGATATTTGCGGCAAAGGGTTTATGCACAAGAAGAATATATGGAAACATAAGAAAGTGCTTCACGCAGATTTACTCAACGATAGAAATGACAGCGAGGAGAACACGATGCAAGCCTCCACAGAGGAGGATGAATACAACGTTGACGAAAATGGCGCTGTGCTTTCCACGCCACAATTCAATAGTTTCAACTTTACCAACTTCAATAGCGTACCCCAAGTGGCACAAGATCCAACGCCGTTCTCATGCGAAATTTGCTCTAAACGATTCCCGCTTAGGACCAGTTTGTGGAAGCACAAACGCGCTAAGCACGGAATCATCAATCCCAGCGCAGGAGGCAGCAGTGAAACTCAGACACACTCGGGCGGCGGCGACAACAGTAGCCGGTCGAGCTGCACCATTTGTAAAATCTCTTTCTCTGACAAGAAGTCTTATTACCGTCATAGGAAGAATGTTCACAAATCTACTGCACAAATGTGTAAAATTTGTGGAAAAGCACTGAACTCGACACAGGAACTTTATGAGCATCTTAAATCCACCCACGCTCGAGAGTTGCTGGGCTACAACGCAAATCAAGGCTCAAACAAGTCGCAAGAGATAGCTCAAGATATGGAGCCCGAATATGACAACGATCAGGACGCGATCGATCCCAGCGTGGACTACCAGGCGCGGTACCCTTGCGATACTTGCGGTAAGCAATTCGTAGGTTTGCTTGCGTTGCAAAATCATCAATGTATTACCCAGAATTCCTCGCAACCTCAGACTTTTGACTGTGAAATTTGTCACAAGAGTTATACGTCTATTGCTGCATTGAAGAGTCACCGCGGCTGGCATTTGCGTTCGCCTGACGGCAAAGCAGCCGCAAACAACAGCGGCCTGTGGATGCCTCAACACAAAGTCACTAGCAAAGTGAGCAAACACGAAGTGGTCGGAGTCTCGGCCCCCGCATCATCCGTTATGAAGCGGCGGCTGCCGCCAGAAGTAGAAATAACTGTAGTGAATCCAAATAAAAAGATGCGCTCAGATGACTCTCTCGAGTTGGATCATCAGAATTCAAATACCGGTCCCCTGGAAGACAGGTACTGTACGATATGCGACAAGGAGTTCACGAAACGCGCGGCCTACCAGCGTCACATGGACGAAGTGCACCAACCGAACTCTGTGTTTTGCCCTGTGTGCGAGAAGAGTTTCACACGAAAGTCAACCTTACTCGTCCACATGAAGAAGCACTACGAGGGTGGCGAGAGTAGTACTGCAATTCCCATTGGGCAGTTGGAAGACGAGATGTTCTCGTGCGATTTGTGCGGCTCCCAGTACGACACCGAGAGCGCTTTGCAATTGCATCGGCTGAACCACGGGGAGGAGGACTCGGCCGAGTCGGATGATGATGATGAAGGCAGCATTCCAATAGCGCAGCCGGGTGAGTTCACGTGCGCGCAGTGCGGAGACGGGGTCGCCACTCCGCGAGACCTTATCGCCCACCGCTCCATGCACGCCACTCCGACCAAATTCTTCTGCAATATATGCAAGGTGTACTTCGCGCGAGCCCTCGACCTGTCCTCGCACACGCGCGCCCGACACGCGGACAACGAAAAGGTATTCTTTCCCTGCGCGATGTGCGACCGCTTCTACATGAACAAAAAGAGTTTGCAGCGGCACATCGAAATGGTACATTGA
Protein Sequence
MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPILASKIRDCVSVQINETDELPTNVCKKCVDNVNNWHLFKGVCERSQDKLQTLIKKDGSQLEDEEVNIKSEPLSDEAYDDGVVIDGSYPDSENASSTNKLQPEGPPILASLGLTPRSDKGMESDKDEDDEEEEEMNEPVQKYAKVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVTNKKAHAHMQPKLRPNPFNPKARLMPNPISHKMQFMPKIIPSRVVPNKVISPPKPVPIKTLKGSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDAYDQQGEDEMDGEMQNNQSHNYDTVDMESDNEIEIARQHGQGGEGEGEDHNDNEDGNHDDDNNMEGPHSDNEKDHDDTAESQENMEMDTEMKGDDDAREGEEGHEDKEHDDHDANNEDNDDDFDDDLPPLDIAPVVEINEDMQTNSYNSEMNEEDEDLDETAAHDDTVDGEVGEKELDPDKIYITRTQRDFIQKYRDVILQINTKRCVCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDEMVIEDEPKDDNKAQQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLGCVHCRARYKDKSLLKKHIRNGECTVYIACELCTERFVNLQDFSDHAIGVHAGNYDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDAKFEQTAELNQHIYMEHSDRTLGVNVEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGAAAQAAIDSEFFCDICIRSFKSRQAYSNHMRIHAKIPTTNRKPGETKGFAPQIIGKPIKQFAMVQPSIVSFNPSYNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDEYNVDENGAVLSTPQFNSFNFTNFNSVPQVAQDPTPFSCEICSKRFPLRTSLWKHKRAKHGIINPSAGGSSETQTHSGGGDNSSRSSCTICKISFSDKKSYYRHRKNVHKSTAQMCKICGKALNSTQELYEHLKSTHARELLGYNANQGSNKSQEIAQDMEPEYDNDQDAIDPSVDYQARYPCDTCGKQFVGLLALQNHQCITQNSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVGVSAPASSVMKRRLPPEVEITVVNPNKKMRSDDSLELDHQNSNTGPLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLLVHMKKHYEGGESSTAIPIGQLEDEMFSCDLCGSQYDTESALQLHRLNHGEEDSAESDDDDEGSIPIAQPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00467580;
90% Identity
iTF_00467580;
80% Identity
-