Dfal014324.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000060.1:1535025-1538119[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.69 42 5.0 0.1 5 23 19 37 18 37 0.95 2 20 0.28 17 6.2 7.3 1 23 66 88 66 88 0.98 3 20 0.0018 0.11 13.1 0.1 1 23 113 135 113 135 0.95 4 20 6 3.7e+02 2.0 4.4 5 23 143 162 140 162 0.93 5 20 0.00033 0.02 15.4 0.1 3 23 218 238 216 238 0.98 6 20 2.1e-05 0.0013 19.2 0.5 1 23 244 266 244 266 0.98 7 20 5.8e-05 0.0036 17.8 0.7 3 23 274 294 272 294 0.98 8 20 1.2e-06 7.5e-05 23.1 0.9 1 23 300 322 300 322 0.99 9 20 0.00056 0.035 14.7 0.2 1 23 328 350 328 350 0.98 10 20 5.7e-05 0.0035 17.8 4.3 2 23 357 379 357 379 0.96 11 20 1.7e-07 1e-05 25.8 0.7 1 23 385 408 385 408 0.97 12 20 0.029 1.8 9.3 0.4 1 19 413 431 413 436 0.91 13 20 0.0024 0.15 12.7 0.5 1 23 436 458 436 458 0.95 14 20 0.0092 0.56 10.9 0.7 1 23 463 486 463 486 0.96 15 20 0.034 2.1 9.1 0.1 2 20 490 508 489 510 0.93 16 20 2 1.2e+02 3.5 1.7 2 14 514 526 513 529 0.83 17 20 0.00064 0.04 14.5 0.1 2 23 549 571 548 571 0.95 18 20 0.023 1.4 9.6 0.4 2 21 576 595 575 596 0.91 19 20 0.0011 0.065 13.8 0.0 2 23 602 623 601 623 0.95 20 20 0.0005 0.031 14.9 3.8 1 23 628 651 628 651 0.96
Sequence Information
- Coding Sequence
- ATGGACTCGCCATCTGTCACATTGGCACCTAATATACCTCTGGTGGAAAGTGGTGTGTGTCCTAAAGCGTATACATGTTTAGACGACTACAATAAGCACATAACTAAACATGATCCAAGTAATATTGACTTGAAAGATGCCCATATCCTGAAGCATATAAAAAGTGCATATGTATATCTGGACCGCTCCAAATCCTTCCAATGTGAGCATTGTGGTGACAGCTTTCAGCACTGCAGAGATTATAAATTGCATAAATTGATTCACATACAACAAGCTGCAAATGTCCTCCTTAAAGCCAGTAAACACAATAATAATGATAGTCGCTTTGTCAAGTTATATAAATGTTCAGAATGTGATTCACGTTTTGTTGCAAGGAGCACTCTGATCGCCCATGCGGAGGCCCATGAGCCTCGCTCACATGTGTGTCACTGTGGCATTGGCTACTTCAAGAAGTGTGACCTGAACTCCCACAGGAAACTGGTGCACCCCGATTACAAGGAACCTGAGGTGAAAGTACAAGTAAAAGAGATCATTAAAACAAAATTAGGTTCCTATTCGTCTCCAAAGTTTAAATCCAAAGCGAAATCAAAGAAAGTAAAACGGAAAAATGGTCAGATAGATACAAAAGCTCCAACAGAAAGGAGGTTTGGTTGTCCAGTTTGTGAGAAGACTTTGGCCAGTAAAAGAGGTTTGATAATACATCTACGCATGCACACAGGTGAGAAACCATACCCTTGTGGGCTGTGTGGTAAGAGGTTCGCACAGGCCTCCACACGAACAACACATTTGAAACGACACGCAGGTGTTAAGGACTTTGGGTGTGAACATTGTGGAAAAAGTTTCTATATGAAAGGTGCATTGGACTTGCATTTGCGTGTTCACACCAAGGAGAAGCCTTACAAATGTATGTATTGTGAAAAGGCTTTCAGTGACCCCTCCGCCCTGGGGCGCCATCACCGCATCCACACCGGCCTCAAGCCCTACCAGTGCCCACTGTGCCCTAACAAGTACAGCGATATTAGCGCCCTCGTAACCCACAAGCAACGCCACGTGAACTATAAAGCAGCTGAGTGTGGGTTGTGCCACAAAAAGTTTCCCAGCAAGCATAATCTGAGGAACCATCTGAAAGTAATGCATACGAATATTAAGGACTATGAATGCTCAGAATGTGGCAAAACATTTGCTCTGAAATCATATTTGAAAACACATATGCAGATCAGTCACATGCCGAAGCAATATCGTTGTTCTCATTGCGGGGAGGACCTGGGTAGCAAGGCCAGCCTGGCGACCCACTGCGGCACAGTTCATAACTGCGCAGAGTGCAAGCGGGGCTTCCCTAGCAATTCACACATGGTTGGACATATTCTTTACCACCCCGGCGCTTGGTTCGAATGTGACGAATGCGGTGCGGATTATAACGCAAAAACTAAATTGCATCAGCATATTGCTAAAAAGCACTCTAATATACGCTGTAACGTGTGTTCATGGCGAGTAATGTCTAAAAGTGAGCTGGTCAAACACAAAGAGAGGGGTTGCCTCAGGTGTCAATATTGCAATCGTGGGTACACGAAATCACACGCATGTAGATGGAAACATTCCAAGCCGAGCAAGAAGGAAAAACGTCCAAAAGTGGGTTTAAAATTAGTGTGTGATTCCTGTGGACAAGATTACTCTAGTAAGCAACTTTTGGTAAATCACATAAGATTAGTCCACACTGTAACATTATACTGCAGTGAGTGTCCGGAGAAATTTTATAGCGATGAGTTGTTCCAACGCCACAAGCTGAAGGGATGTAAGCGAATAGAGTGTGAGATATGTGGGGAGGTCGTCTTTTCACAGAGAAATTATGAAAGGCATCTGGAGGCGCACTCCGGGTTCAGACACAAGTGCCACAAATGTGATAGATCTTTTGGCAAGGAAGATGTCTTAAAGAAACATTTGATTGTTCGACATGGGCTCAACTAA
- Protein Sequence
- MDSPSVTLAPNIPLVESGVCPKAYTCLDDYNKHITKHDPSNIDLKDAHILKHIKSAYVYLDRSKSFQCEHCGDSFQHCRDYKLHKLIHIQQAANVLLKASKHNNNDSRFVKLYKCSECDSRFVARSTLIAHAEAHEPRSHVCHCGIGYFKKCDLNSHRKLVHPDYKEPEVKVQVKEIIKTKLGSYSSPKFKSKAKSKKVKRKNGQIDTKAPTERRFGCPVCEKTLASKRGLIIHLRMHTGEKPYPCGLCGKRFAQASTRTTHLKRHAGVKDFGCEHCGKSFYMKGALDLHLRVHTKEKPYKCMYCEKAFSDPSALGRHHRIHTGLKPYQCPLCPNKYSDISALVTHKQRHVNYKAAECGLCHKKFPSKHNLRNHLKVMHTNIKDYECSECGKTFALKSYLKTHMQISHMPKQYRCSHCGEDLGSKASLATHCGTVHNCAECKRGFPSNSHMVGHILYHPGAWFECDECGADYNAKTKLHQHIAKKHSNIRCNVCSWRVMSKSELVKHKERGCLRCQYCNRGYTKSHACRWKHSKPSKKEKRPKVGLKLVCDSCGQDYSSKQLLVNHIRLVHTVTLYCSECPEKFYSDELFQRHKLKGCKRIECEICGEVVFSQRNYERHLEAHSGFRHKCHKCDRSFGKEDVLKKHLIVRHGLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00467579;
- 90% Identity
- iTF_00467579;
- 80% Identity
- -