Darc014552.1
Basic Information
- Insect
- Drepana arcuata
- Gene Symbol
- -
- Assembly
- GCA_016069955.1
- Location
- JACCPG010002938.1:4580-5101[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.3 6.5e+02 0.6 0.0 29 38 17 26 17 29 0.89 2 2 3.4e-07 0.00074 19.6 0.0 1 38 28 65 28 69 0.92
Sequence Information
- Coding Sequence
- ATGAAGCCACAAAAGAAAAAAGAGTTAGAGAAGAAGAAGAAGAAGAAGCCAAAAAATACTATAGAAAAAAGAAAACAATATTCAGAAGATAGTTTGAAAAAAGCATTTTACGCAATTGAAAGTGGTATGCCTAAAAAGCAAGCAGCGAAGCAATTTCAAGTACCCCGAGCTACTTTACAATTTCGTATCAAAAACCCAAATCACAAACCACTGCCAGGTCCAAGCCCAGTACTAAATGAAGAAGAAGAAAATCAAATAAAGAATTGGCTGACTGTTAGCCACAAGAAGGGCTTTCCGAAACGAAAAGAAGATGTCCTGAAAAGTGTGTCGAAATTCGTAAAAAAGAGTGGAAGGCCTAACCCATTTAAAGACAATATCCCTGGGGAAAAGTGGTTCAAACTGTTCCTAAAACGGCACCCGGATATTTCAATACGCACTCCAGAAGCTGTGACATCCGCGAGTGCAGCAGTTTCAGAGAATGATATAAAAGGATGGTTCAAAGATATTGAGGAATACCTCTAA
- Protein Sequence
- MKPQKKKELEKKKKKKPKNTIEKRKQYSEDSLKKAFYAIESGMPKKQAAKQFQVPRATLQFRIKNPNHKPLPGPSPVLNEEEENQIKNWLTVSHKKGFPKRKEDVLKSVSKFVKKSGRPNPFKDNIPGEKWFKLFLKRHPDISIRTPEAVTSASAAVSENDIKGWFKDIEEYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00467359;
- 90% Identity
- iTF_00467359;
- 80% Identity
- -