Darc014555.1
Basic Information
- Insect
- Drepana arcuata
- Gene Symbol
- -
- Assembly
- GCA_016069955.1
- Location
- JACCPG010002938.1:3789-4217[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.33 7.2e+02 0.4 0.0 29 38 19 28 19 29 0.92 2 2 1.8e-09 3.9e-06 26.9 0.0 1 38 30 67 30 71 0.92
Sequence Information
- Coding Sequence
- ATGAAGCCACAAAAGAAAAAAGAGTTAGAGAAGAAGAAGAAGAAGAAGAAGAAGCCAAAAAATACTATAGAAAAAAGAAAACAATATTCAGAAGATAGTTTGAAAAAAGCATTGGACGCAATTGAAAGTGGTATGCCTAAAAAGCAAGCAGCGAAGCAATTTCAAGTACCCCGAGCTACTTTACAATTTCGTATCAAAAACCCAAATCACAAACCACTGCCAGGTCCAAGCCCAGTACTAAATGAAGAAGAAGAAAATCAAATAAAGAATTGGCTGACTGTTAGCCACAAGAAGGGCTTTCCGAAACGAAAAGAAGATGTCCTGAAAAGTGTGTCGAAATTCGTAAAAAAGAGTGGAAGGCCTAACCCATTTAAAGACAATATCCCTGGGGAAAAGTGGTTCAAACTGTTCCTAAAACGGCACCCGTAA
- Protein Sequence
- MKPQKKKELEKKKKKKKKPKNTIEKRKQYSEDSLKKALDAIESGMPKKQAAKQFQVPRATLQFRIKNPNHKPLPGPSPVLNEEEENQIKNWLTVSHKKGFPKRKEDVLKSVSKFVKKSGRPNPFKDNIPGEKWFKLFLKRHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00467363;
- 90% Identity
- iTF_00467363;
- 80% Identity
- -