Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:11434257-11442458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.2e-05 0.0011 20.7 0.5 1 23 14 36 14 36 0.98

2 21 7.5e-05 0.0069 18.2 5.4 1 23 42 64 42 64 0.98

3 21 0.047 4.3 9.4 1.3 1 23 70 92 70 92 0.97

4 21 0.00012 0.012 17.5 4.0 1 23 98 120 98 120 0.98

5 21 0.014 1.3 11.0 4.2 1 23 126 148 126 148 0.97

6 21 0.00075 0.069 15.1 4.1 1 23 154 176 154 176 0.98

7 21 2.9e-05 0.0027 19.5 2.1 1 23 210 232 210 232 0.97

8 21 0.031 2.8 10.0 3.7 1 23 238 260 238 260 0.97

9 21 9.2e-06 0.00085 21.1 1.2 1 23 266 289 266 289 0.96

10 21 0.035 3.2 9.8 5.1 1 23 334 356 334 356 0.99

11 21 0.00013 0.012 17.4 5.1 1 23 361 383 361 383 0.99

12 21 0.00078 0.072 15.0 3.6 3 23 391 411 389 411 0.98

13 21 0.00016 0.015 17.2 0.6 1 23 417 439 417 439 0.99

14 21 4e-05 0.0036 19.1 4.2 1 23 445 467 445 467 0.98

15 21 0.18 16 7.6 2.8 1 23 473 495 473 495 0.97

16 21 0.0045 0.41 12.6 6.9 1 23 501 523 501 523 0.97

17 21 0.061 5.7 9.0 0.4 9 23 536 550 528 550 0.90

18 21 0.032 3 9.9 3.6 2 23 557 578 556 578 0.96

19 21 5.7e-05 0.0052 18.6 2.4 1 23 583 605 583 605 0.98

20 21 0.0032 0.3 13.0 2.7 1 23 611 633 611 634 0.96

21 21 0.00047 0.044 15.7 1.5 2 23 640 661 640 661 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.2e-05	0.0011	20.7	0.5	1	23	14	36	14	36	0.98
2	21	7.5e-05	0.0069	18.2	5.4	1	23	42	64	42	64	0.98
3	21	0.047	4.3	9.4	1.3	1	23	70	92	70	92	0.97
4	21	0.00012	0.012	17.5	4.0	1	23	98	120	98	120	0.98
5	21	0.014	1.3	11.0	4.2	1	23	126	148	126	148	0.97
6	21	0.00075	0.069	15.1	4.1	1	23	154	176	154	176	0.98
7	21	2.9e-05	0.0027	19.5	2.1	1	23	210	232	210	232	0.97
8	21	0.031	2.8	10.0	3.7	1	23	238	260	238	260	0.97
9	21	9.2e-06	0.00085	21.1	1.2	1	23	266	289	266	289	0.96
10	21	0.035	3.2	9.8	5.1	1	23	334	356	334	356	0.99
11	21	0.00013	0.012	17.4	5.1	1	23	361	383	361	383	0.99
12	21	0.00078	0.072	15.0	3.6	3	23	391	411	389	411	0.98
13	21	0.00016	0.015	17.2	0.6	1	23	417	439	417	439	0.99
14	21	4e-05	0.0036	19.1	4.2	1	23	445	467	445	467	0.98
15	21	0.18	16	7.6	2.8	1	23	473	495	473	495	0.97
16	21	0.0045	0.41	12.6	6.9	1	23	501	523	501	523	0.97
17	21	0.061	5.7	9.0	0.4	9	23	536	550	528	550	0.90
18	21	0.032	3	9.9	3.6	2	23	557	578	556	578	0.96
19	21	5.7e-05	0.0052	18.6	2.4	1	23	583	605	583	605	0.98
20	21	0.0032	0.3	13.0	2.7	1	23	611	633	611	634	0.96
21	21	0.00047	0.044	15.7	1.5	2	23	640	661	640	661	0.98

Sequence Information

Coding Sequence: ATGAAGACACACAAATTAGGACATACCAACGAGAAGCCCTTCACTTGTGAAATTTGTGATCGTAATTTCAGAGAACTTGGAACCTTGAGACGGCACGTGTTAACGCACAACAAGGAGGAGCGCTTCACTTGTGAATTTTGCGATTGTAAATACAGACAACTTAGAAActtgaaacggcacatgttaacgcacaACAAAGAGAAGCCCTTCGCTTGTAAAACTTGCGATCGTAAATCCAAACGGCTCGCCATCTTGAAACAGCACACGTTAACGCACAACACAGAGAAGCCCTTCACTTGTAAAACTTGCGAGCGTAGATTCACACAAATGAGAGACTTCAAACGCCATTTATtaacacacaccgacgagaaacctttcagttgcgatctttgcgattacaagtgtcgaCGATCCGAAAGTATGAAGGAACACAAATTAAGACATACCAACGAGAAGCCCTTCACTTGTGAAAATTGCGATTGTAAGTTTAGAGAGCTTAAAACCTTGAAACGGCACGTGTTAACGCACAACAAGGAGAAGCCCTTCGCTTGTAGAACTTGCGATCTTAAATCCAAACGGCTCGCAATCTCGAAACAGTACACGTTAACGCACAACACAGAGAATCCCTTCGCTTGTAAAATTTGCGATCGCAGATTCACAGAAATGAGAAACTTCAAACGTCATTTATTgacacacaccgacgagaaacctttcagttgcgatctttgcgattacaagtgtcgaCGATCCGAAAGCATAAAGGAACACAAACTAAGACATACCAACGAGAAGCCCTTCACTTGTAAAATTTGCGATCGTGGATTCACACGAATGGGGACATTGAAACGCCACTTGTTAAACACACACGAGAGGCGTATTACTCAGAACGACTTGGCGAAAATTTTTGGTAAGCGTTGCTTCGTTGTCTTGACCCGCTGCGCATCGCTGCCAACCAAAAGTAAACAGCCGCGACCTCGTAACTGCGCAAGCGCAAACCCGTACAGGTGCGATCTTTGCCGTTACAGGTGTAAAAAACTCAAAACGTTAGAAACTCATGCGAGAAGACACACCGAGAAACCTTTCAAATGTAACATCTGTGATTTTAGATTTACaagtatacattttttaaaaaggCACGTCAAGACGCACACCGATGAAAAACCGTTCGGGTGCGAGAAATGCGATTACAAGTGCAGATCGCGTTCTAATTTACTTCAGCACTTAACGACACACAGTGACGAGAGGCCTTTCAGATGTGAAATATGTGATTCTAGATTTACAAGTGTGTACGTCTTAAAAATACACATTAAGACGCACACCGATGAAAAGCCGTTCGTGTGCGAGAaatgcgattacaaatgccgatcgCGTTCTAATTTGCTTCGCCACTTAACGACGCACTACGAAGAGAGGCCTTTCAGATGTGACGCATGTGATTTTAGGTGTAAAACTTTGCAAGGTTTGAAATTGCACGTTACGAAGCACACCGATGAAAAACCGTTCGAGTGTAAGAAGTGCCATTGTAGGTTCAAATCGCGTCAGAGTTTGTGGCGGCACTCACTGGTACATAATGAGATGGTGTACAGATGTAGCGTAAGTGATTTTGGATTTAAAACTACGCAAACTTTAAAACGTCACATGATGACGCACACGGACGAGAAACCGCTTATGTGTGCGAAGTGCGATTACCGGTGCAGATGGCCTCATGATTTACGTCGGCACTTACAGACGCATGATGCAAACCCGTTCAGATGTAGCGTGTGTGGTTTCAGTTGTAGGACTTCAGAAACTTTAGAACGGCACGTTTTGAGACACACGGGTGGCAGAACGTACGAATGTAACAAATGCGAATACAAAACCGAAACGCGTGGCAATTATCGTGGACATCTAATGACACATCACGGCGAGAAGCTCAGGAAATGTAATATTTGTGATTACAGGAGCATGTTTCTTGGCAATTTGAAACAGCATATGCGTAGGCATGGGAATGAAAAATGA
Protein Sequence: MKTHKLGHTNEKPFTCEICDRNFRELGTLRRHVLTHNKEERFTCEFCDCKYRQLRNLKRHMLTHNKEKPFACKTCDRKSKRLAILKQHTLTHNTEKPFTCKTCERRFTQMRDFKRHLLTHTDEKPFSCDLCDYKCRRSESMKEHKLRHTNEKPFTCENCDCKFRELKTLKRHVLTHNKEKPFACRTCDLKSKRLAISKQYTLTHNTENPFACKICDRRFTEMRNFKRHLLTHTDEKPFSCDLCDYKCRRSESIKEHKLRHTNEKPFTCKICDRGFTRMGTLKRHLLNTHERRITQNDLAKIFGKRCFVVLTRCASLPTKSKQPRPRNCASANPYRCDLCRYRCKKLKTLETHARRHTEKPFKCNICDFRFTSIHFLKRHVKTHTDEKPFGCEKCDYKCRSRSNLLQHLTTHSDERPFRCEICDSRFTSVYVLKIHIKTHTDEKPFVCEKCDYKCRSRSNLLRHLTTHYEERPFRCDACDFRCKTLQGLKLHVTKHTDEKPFECKKCHCRFKSRQSLWRHSLVHNEMVYRCSVSDFGFKTTQTLKRHMMTHTDEKPLMCAKCDYRCRWPHDLRRHLQTHDANPFRCSVCGFSCRTSETLERHVLRHTGGRTYECNKCEYKTETRGNYRGHLMTHHGEKLRKCNICDYRSMFLGNLKQHMRRHGNEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467109;
90% Identity: iTF_00467109;
80% Identity: iTF_00467109;