Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:8728058-8731234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.09 8.3 8.5 0.3 3 23 14 34 12 34 0.97

2 29 0.067 6.2 8.9 1.1 3 23 43 63 41 63 0.96

3 29 0.0061 0.57 12.2 1.9 2 23 70 91 69 91 0.97

4 29 0.0072 0.66 12.0 2.1 3 23 99 119 97 119 0.97

5 29 0.004 0.36 12.8 3.5 2 23 126 147 125 147 0.97

6 29 0.12 11 8.1 2.5 1 23 153 175 153 175 0.97

7 29 0.11 10 8.2 2.9 1 23 182 204 182 204 0.96

8 29 0.4 36 6.5 8.8 1 23 210 232 210 232 0.97

9 29 0.067 6.2 8.9 1.1 3 23 240 260 238 260 0.96

10 29 0.014 1.3 11.0 3.4 1 23 267 289 267 289 0.97

11 29 0.00023 0.021 16.7 0.7 1 23 295 317 295 317 0.97

12 29 0.00042 0.039 15.8 4.0 2 23 324 345 323 345 0.97

13 29 0.00012 0.011 17.5 0.6 1 23 351 373 351 373 0.98

14 29 0.03 2.8 10.0 2.3 1 23 387 409 387 409 0.98

15 29 0.00061 0.056 15.3 0.8 1 23 415 437 415 437 0.98

16 29 0.066 6.1 8.9 1.7 3 23 445 465 443 465 0.97

17 29 0.0012 0.11 14.4 3.5 2 23 472 493 471 493 0.96

18 29 0.0067 0.62 12.1 2.2 3 23 501 521 501 521 0.98

19 29 0.0022 0.2 13.6 5.8 3 23 530 550 528 550 0.96

20 29 0.00019 0.018 16.9 1.7 1 23 556 578 556 578 0.98

21 29 0.059 5.4 9.1 1.8 3 23 586 606 584 606 0.98

22 29 0.0012 0.11 14.4 1.5 2 23 613 634 612 634 0.96

23 29 0.0094 0.86 11.6 2.9 1 23 641 663 641 663 0.98

24 29 0.016 1.4 10.9 4.5 1 23 669 691 669 691 0.98

25 29 0.0016 0.15 14.0 1.4 3 23 699 719 697 719 0.98

26 29 0.023 2.1 10.4 0.4 1 23 725 747 725 747 0.98

27 29 0.39 36 6.5 0.4 1 23 754 776 754 776 0.97

28 29 0.00023 0.022 16.6 2.3 3 23 784 804 784 804 0.99

29 29 1.3e-05 0.0012 20.6 2.7 1 23 810 832 810 832 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.09	8.3	8.5	0.3	3	23	14	34	12	34	0.97
2	29	0.067	6.2	8.9	1.1	3	23	43	63	41	63	0.96
3	29	0.0061	0.57	12.2	1.9	2	23	70	91	69	91	0.97
4	29	0.0072	0.66	12.0	2.1	3	23	99	119	97	119	0.97
5	29	0.004	0.36	12.8	3.5	2	23	126	147	125	147	0.97
6	29	0.12	11	8.1	2.5	1	23	153	175	153	175	0.97
7	29	0.11	10	8.2	2.9	1	23	182	204	182	204	0.96
8	29	0.4	36	6.5	8.8	1	23	210	232	210	232	0.97
9	29	0.067	6.2	8.9	1.1	3	23	240	260	238	260	0.96
10	29	0.014	1.3	11.0	3.4	1	23	267	289	267	289	0.97
11	29	0.00023	0.021	16.7	0.7	1	23	295	317	295	317	0.97
12	29	0.00042	0.039	15.8	4.0	2	23	324	345	323	345	0.97
13	29	0.00012	0.011	17.5	0.6	1	23	351	373	351	373	0.98
14	29	0.03	2.8	10.0	2.3	1	23	387	409	387	409	0.98
15	29	0.00061	0.056	15.3	0.8	1	23	415	437	415	437	0.98
16	29	0.066	6.1	8.9	1.7	3	23	445	465	443	465	0.97
17	29	0.0012	0.11	14.4	3.5	2	23	472	493	471	493	0.96
18	29	0.0067	0.62	12.1	2.2	3	23	501	521	501	521	0.98
19	29	0.0022	0.2	13.6	5.8	3	23	530	550	528	550	0.96
20	29	0.00019	0.018	16.9	1.7	1	23	556	578	556	578	0.98
21	29	0.059	5.4	9.1	1.8	3	23	586	606	584	606	0.98
22	29	0.0012	0.11	14.4	1.5	2	23	613	634	612	634	0.96
23	29	0.0094	0.86	11.6	2.9	1	23	641	663	641	663	0.98
24	29	0.016	1.4	10.9	4.5	1	23	669	691	669	691	0.98
25	29	0.0016	0.15	14.0	1.4	3	23	699	719	697	719	0.98
26	29	0.023	2.1	10.4	0.4	1	23	725	747	725	747	0.98
27	29	0.39	36	6.5	0.4	1	23	754	776	754	776	0.97
28	29	0.00023	0.022	16.6	2.3	3	23	784	804	784	804	0.99
29	29	1.3e-05	0.0012	20.6	2.7	1	23	810	832	810	832	0.98

Sequence Information

Coding Sequence: ATGCATGAGCTGACACAtgccgacgagaaaccgttcggaTGTTCTATTTGCGATCACCAAATCCGAGGAGCCGAGGCATTAAAGCAGCATATGTTACTACACAGCGACGACGACAAGTCGTTCGGTTGCGATCGTTGTGATTTCAAGACGCAAACGCAAGACTCGTTGAAAACCCACCTGTTGCTGCACACCAATGAAAAACCTCTCAAATGTGGCCTTTGCGATTACGAATGCCGGACGACAACAAACTGGACGAAGCACATATTAAGCCACGGCGAAGCGAAGCCGTTCGGCTGTGacctctgcgattacaaatgtcgcgAATCAAGAtatttgaagcagcacatgttaatacacaccggcgataAGCCgatcagttgcgatctttgcgatttcaaGTGTAGACAACGCGGAAGTATGAAGCGGcacatgttaaagcacaccggccaGAAGCCCTTCAGCTGCagtctttgcgattttaaatgtcGGTCCGCCGGAGATATAAAGCAGCACAAGGCGAAACATACTGACCGCGAGAAGCCCTTCAGTTGCAGCCTTTGCGAATTTAAGTGTCGGAAAGCCGGATACTTGAAACAGCATGTGGTGAGGCACGACAGCGAGAAGCCGTTCTGCTGTGGACATTGCGATTATAAAAGTCATCACCTCGCAAAGCTGAGGAGGCACATGTTAATCCATACCGACTCGAAGCCGTTCGGTTGCGATTTTTGCCCTTACAAATGTCGTAGCTCGGAAGGTTTGAAATCGCACGGCTTAATACACACCGCCGGCAGCGTCGAGTTCAGCTGCGATCAGTGCGATTTTAAAACGCGACATCGCACATCGTTGAGAAACCACGAGTTGgtgcacaccggcgagaaacgaTTTGCTTGTGACGTTTGCGGCCACAAGTCGCGAACGCGCGCGGATTTGAAGGTTCACCTGTTaacgcacaccgacgagaagccgatTAGTTGCaacctttgcgattacagatgCCAGTCAAAATCGTACCTGAAAAGGCACATGTtgaaacacaccggcgagaagccgtttagttgtgcgCTTTGCGATTATAGATTCGCTGTACGCGGGAGATTGAAACGGCACATGTTGACGCACACTAGAGAGAAGTTCAAGCGCCAAGACGACAAAAAAACATACGAATGTCGCCTGTGCGATTCTAAATTCCAATCGCAAGGGTGTTTGCGCGAGCACGTGCTgaaacacaccgacgagaagctaTTCCGTTGCGCCGTCTGCGACTATAAATTTCAAGACATCGAAAAATTGAAGCGACACGTGTCGACGCACGTCGGAGAGAAGAAATTCGGCTGCGAGCTCTGCAACTTCAAATGCCAACAATCCGAATTATTAAGACGGCATGTGCTGAtacacacgggcgagaagccgttgTGTTGTAATCTGTGCGATTACAGGTCGCGACATCCGGGAACCCTGAAACGGCACATGCTAATTCACACCGACGAGAAGTCGATcggttgtgatctctgcgattacaaatgccgacaaaTTGCGTCGTTAAAACGGCACATGTTTGTGCACACTGGCGGTGAGAAGTCATTAGCTTGCGCTtattgcgattacaagtgtcgaAAACACCGAAATCTGAAGCGTCACATGTTGAGACACACCGATGAGAAACCGTTCAGCTGTGATAtctgcgattataagtgccgggAACTCGCGTATTTAAAGCGGCACATGCTGATACACACCGGCAACAAACCGTTcggttgcgatctttgcgattacaagtgtcggCAAGTCGCGAAACTGAATCTGCACAGGTTAActcacaccgacgagaagccgttgagttgtgatctttgcgattacaaatgtcgacaGGGTGTAGATTTGAAGCGGCACATGTTGATGCACACGGGCGACGAGAAACCGTTTAGTTGTAATTTCTGCGATTACAGGTGCCTACAGGCTGTGAATTTGAAACGTCACATCTTGAGACACACCGGTGaaaagccgtttagttgtgatctttgcgctTACAGATGCCGCCAGCTCATTTCTTTAAAGCATCACATGCTGACGCACACCGACAAGAAACCGTTCGGTTGCGACCTTTGCGACTACAAATGCCGAAGGGCCGAAGTGCTGAAACGGCATATTTTAACGCACACCGACGAGGAGCTGTTCAgatgtggtctttgcgattataaaagtcGAGAACTCGCGATGGTAAAGCGGCACATGTCAGTGCATGCGGGGGTTAAGAAAATATTCGTTTGTAATCTGTGCGAGTACAAGACGCGGTTGTCCGTGGAAATAAGTCGTCACGTGTTGaggcacaccggcgaaaagccgATTGGTTGTGAGCTTTGCAGTTATAAATGCGTTCAGCCCTCACAATTGAAGCGGCACATGTTGACGCACActgacgagaagccgttcagttgtaataTTTGCGCTCATAAATTTCGAAGTTCCAGCAACTTGAAACGTCACTTGCTAATACACCGTTAG
Protein Sequence: MHELTHADEKPFGCSICDHQIRGAEALKQHMLLHSDDDKSFGCDRCDFKTQTQDSLKTHLLLHTNEKPLKCGLCDYECRTTTNWTKHILSHGEAKPFGCDLCDYKCRESRYLKQHMLIHTGDKPISCDLCDFKCRQRGSMKRHMLKHTGQKPFSCSLCDFKCRSAGDIKQHKAKHTDREKPFSCSLCEFKCRKAGYLKQHVVRHDSEKPFCCGHCDYKSHHLAKLRRHMLIHTDSKPFGCDFCPYKCRSSEGLKSHGLIHTAGSVEFSCDQCDFKTRHRTSLRNHELVHTGEKRFACDVCGHKSRTRADLKVHLLTHTDEKPISCNLCDYRCQSKSYLKRHMLKHTGEKPFSCALCDYRFAVRGRLKRHMLTHTREKFKRQDDKKTYECRLCDSKFQSQGCLREHVLKHTDEKLFRCAVCDYKFQDIEKLKRHVSTHVGEKKFGCELCNFKCQQSELLRRHVLIHTGEKPLCCNLCDYRSRHPGTLKRHMLIHTDEKSIGCDLCDYKCRQIASLKRHMFVHTGGEKSLACAYCDYKCRKHRNLKRHMLRHTDEKPFSCDICDYKCRELAYLKRHMLIHTGNKPFGCDLCDYKCRQVAKLNLHRLTHTDEKPLSCDLCDYKCRQGVDLKRHMLMHTGDEKPFSCNFCDYRCLQAVNLKRHILRHTGEKPFSCDLCAYRCRQLISLKHHMLTHTDKKPFGCDLCDYKCRRAEVLKRHILTHTDEELFRCGLCDYKSRELAMVKRHMSVHAGVKKIFVCNLCEYKTRLSVEISRHVLRHTGEKPIGCELCSYKCVQPSQLKRHMLTHTDEKPFSCNICAHKFRSSSNLKRHLLIHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467126;
90% Identity: iTF_00467126;
80% Identity: iTF_00467126;