Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:8320271-8327847[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.9e-05 0.0036 19.1 0.3 1 23 14 36 14 36 0.97

2 27 0.0022 0.21 13.6 1.9 1 23 42 64 42 64 0.98

3 27 6.4e-05 0.0059 18.4 1.9 1 23 70 92 70 92 0.97

4 27 0.13 12 8.0 0.2 3 23 100 120 98 120 0.96

5 27 0.00081 0.075 14.9 2.3 1 23 126 148 126 148 0.98

6 27 0.0026 0.24 13.4 8.0 1 23 154 176 154 176 0.98

7 27 0.00085 0.078 14.9 1.2 1 23 182 204 182 204 0.99

8 27 0.00027 0.025 16.4 1.3 1 23 210 232 210 232 0.98

9 27 0.00062 0.057 15.3 2.5 2 23 237 258 236 258 0.97

10 27 4.6e-05 0.0042 18.9 0.6 1 23 369 391 369 391 0.97

11 27 0.00036 0.033 16.1 2.6 1 23 397 419 397 419 0.98

12 27 0.00076 0.07 15.0 4.1 1 23 425 447 425 447 0.98

13 27 0.075 6.9 8.8 4.5 1 23 453 475 453 475 0.98

14 27 3.8e-05 0.0035 19.1 3.1 1 23 481 503 481 503 0.98

15 27 0.004 0.36 12.8 2.7 1 23 509 531 509 531 0.99

16 27 0.00024 0.023 16.6 1.6 1 23 537 559 537 559 0.99

17 27 0.00015 0.014 17.2 1.5 1 23 565 587 565 587 0.99

18 27 0.0034 0.32 13.0 2.6 1 23 624 646 624 646 0.98

19 27 0.00063 0.058 15.3 2.1 1 23 652 674 652 674 0.98

20 27 0.025 2.3 10.2 3.1 1 23 680 702 680 702 0.98

21 27 0.00019 0.018 16.9 1.5 3 23 710 730 708 730 0.98

22 27 0.021 1.9 10.5 6.5 1 23 736 758 736 758 0.97

23 27 3.4e-05 0.0031 19.3 0.9 2 23 765 786 764 786 0.97

24 27 0.0073 0.67 11.9 5.5 1 23 792 814 792 814 0.98

25 27 9.1e-05 0.0084 17.9 4.4 1 23 820 842 820 842 0.99

26 27 4.7e-05 0.0043 18.8 2.1 1 23 848 870 848 870 0.99

27 27 0.031 2.8 10.0 0.5 2 23 875 896 874 896 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.9e-05	0.0036	19.1	0.3	1	23	14	36	14	36	0.97
2	27	0.0022	0.21	13.6	1.9	1	23	42	64	42	64	0.98
3	27	6.4e-05	0.0059	18.4	1.9	1	23	70	92	70	92	0.97
4	27	0.13	12	8.0	0.2	3	23	100	120	98	120	0.96
5	27	0.00081	0.075	14.9	2.3	1	23	126	148	126	148	0.98
6	27	0.0026	0.24	13.4	8.0	1	23	154	176	154	176	0.98
7	27	0.00085	0.078	14.9	1.2	1	23	182	204	182	204	0.99
8	27	0.00027	0.025	16.4	1.3	1	23	210	232	210	232	0.98
9	27	0.00062	0.057	15.3	2.5	2	23	237	258	236	258	0.97
10	27	4.6e-05	0.0042	18.9	0.6	1	23	369	391	369	391	0.97
11	27	0.00036	0.033	16.1	2.6	1	23	397	419	397	419	0.98
12	27	0.00076	0.07	15.0	4.1	1	23	425	447	425	447	0.98
13	27	0.075	6.9	8.8	4.5	1	23	453	475	453	475	0.98
14	27	3.8e-05	0.0035	19.1	3.1	1	23	481	503	481	503	0.98
15	27	0.004	0.36	12.8	2.7	1	23	509	531	509	531	0.99
16	27	0.00024	0.023	16.6	1.6	1	23	537	559	537	559	0.99
17	27	0.00015	0.014	17.2	1.5	1	23	565	587	565	587	0.99
18	27	0.0034	0.32	13.0	2.6	1	23	624	646	624	646	0.98
19	27	0.00063	0.058	15.3	2.1	1	23	652	674	652	674	0.98
20	27	0.025	2.3	10.2	3.1	1	23	680	702	680	702	0.98
21	27	0.00019	0.018	16.9	1.5	3	23	710	730	708	730	0.98
22	27	0.021	1.9	10.5	6.5	1	23	736	758	736	758	0.97
23	27	3.4e-05	0.0031	19.3	0.9	2	23	765	786	764	786	0.97
24	27	0.0073	0.67	11.9	5.5	1	23	792	814	792	814	0.98
25	27	9.1e-05	0.0084	17.9	4.4	1	23	820	842	820	842	0.99
26	27	4.7e-05	0.0043	18.8	2.1	1	23	848	870	848	870	0.99
27	27	0.031	2.8	10.0	0.5	2	23	875	896	874	896	0.96

Sequence Information

Coding Sequence: ATGAAACAGCACATGAGGATCCATTCTAGCAGGAAACCTTTCGCCTGTCAGATTTGCAATGGTAGATTCCGGTTCGCCGGAAATTTGACGCGGCACATGTTAGTACACTCTGACAAGAAGCAGTTCGTTTGCGATCGCTGCGGTTACAGATGCCACGATGTTGGATCTTTGGTGCAGCACATGCGAATTCATACCGGCGAAagaccgttcagttgtgatctgtGCCCTCGGAAATTTcaacagtctggaaatttgaaaaagcacaagttGAGACACGACGGCGAGAAGACGATCGCTTGTGAATTTTGCGATTACAAAGGTCGAAGTTTAGAAGACGTGAAACGCCACGCGAAAAGACATAACAGCGAAAAGCCGTTCAAATGTGCCCTTTGTGATTTTAAGTGCGCGCGGCCAGCATATTTGAAACGACACCTGTCGAGGCACAGCGGCGAGAAGCGCCACAAATGTCACATTTGCAATCATGAATGCAATCAGGCGTCAAATTTGAGGTTACACTTATTGACGCACACCGACGAGAGGCCGTTTAAGTGCGAACGTTGTGAATTTGCGAGCAAGACGGCGAGATATTTAAAGTTGCACATGCGAGTGCATTCGGATGAAAGGCCGTATAAGTGCGACCTTTGCAAATACGCGACTAAGTTTCAAGGTAATCTACAGAAACATCTGACGATTCACGAGAATCTACTCAAGTGTAATATTTGTGAGTACACGTGTAAATTAGCGAGGGACTTGAAAAAGCATATGTTATCACATGCAGATACAGATTTCTGGAAGATTTTGGATACAGCTGAGAGAATACTAATAGGTCTCAAATCAGAGAATGAAGAAGGATTCGTCGTTACCTTAGGTAATGCTTTAACAATCGCTGTTTTCCAAACTGAAGGAAAatgcTCTGGggtttttaaatatacaattccGGAAGGAAGGACAACCGAATATGATTTTATATCTCCTGAGTATGTACCCAATAGCCCCATGCAAGATCCGTTGGTTTGCAAActctgcgattataagtgccgatcAACCAAACGCATGAAAGAGCGCATGAAAGAGCACATGAAGGTCCATTCCAACGAGAAGACTTTCGCCTGTGAGATTTGCAATTCAAAATTCAGGTTCTCCGGAAATTTGAGACAGCACATGTTGGTACACGCCGACGAAAAACAGTTCGTCTGCGATCGTTGCGGTTACAAATGTCGCTCGGCCGGAACTTTGAAGAAGCACGTGCAAAAGCATGTCGGCGAGAAACTGTTCAGTTGTGACCTGTGCGCTCGGAAATATCAACATTCTTCAAATCTGAAAAGGCACAGgttaacgcacaccggcgagaagcggTTCATGTGTGAATTTTGCGATTACAGATGTCTGCGTTCGGAATATCTGAAACGCCACACGCTGACACACAACGGCGAGAAACAGTTCAAGTGTTCTCTTTGTGATTATGAGTGTACGCAATCTGCgtatttgaaacggcacatgttGATGCACACCGGCGAAAAGAACTACAAGTGCCACCTTTGCAGTTATGAGTGCAATCGGGCCGGAAATTTAGGGTTACATTTATTAACGCACACTGACGAGAGACCGTTTAAGTGCGAACATTGTGCATATGTAGCCAAAACATCCAGATATTTACAAGTACACATGAGAGTACATTCAGATGAAAAGCCGTTTAAGTGTGGCCTTTGCAAATATGCTTCTAGGTTTTCTGGTAACTTACAGAAACACATGTCAACACACAAGAAGCTGCTCAAGTCTGGGATTTCGAAACCGGATGCAGGTGACTTTGATTTTAAATCGCCCGAACATGTGCCCAAATACGTACTGTTAAATAACGGCGTGAGGCTGTTCgtttgcgatctttgcgattacaaatgccaatCGGTGAGCAGCATAAAACAGCACATGAGGACCCATTCCGACGAGAAGCCTTTCGTCTGTGAGATTTGCAAGCACAAAACTCGATTCGCCGGaagtttgaagcagcacatgttaacgcacaccgacgagaagcacTTCGTCTGCGACCGTTGCGCTTACAAATGCCGCACGGCCTCGATCTTGAAGCAGCACATGcgaaaacacaccggcgagaaaccgttcggttGTAATCTGTGCgatcaaaaatttcaacggTCCGGTAGTTTGAAGAGGCACACGTTAACGCACACACACGAGAAGCCCTTCAGTTGTGAGCGTTGCCATTATAGATGCCGACGTCTGGCAGATCTGAAACACCACCTGATAATACATGACAGTGAAAAATCGATTAAATGTGGTCTCTGCGATTATAGATGCGCGCAACCTGCgtatttgaaacggcacatgatgacgcacaccggcgaaaagAACTACAAATGTCACCTTTGCAGTTACGAGTGCAATCAGTCCTGGAATTTGAGGTTGCACTTGTCGAAGCACACCGATGAGAGGCCGTTTAAGTGCGAACATTGTGAGTACGTAAGCAAGACAGCCAGACATTTAAAGTTGCACATGCGAGTGCATTCGGATGAAAAGCCGTATAAGTGCGACCTTTGCAAATACGCGACTAAGTTTCAAGGTAATCTACAGAAACATATGACCACGCACGAGAAACTGCTCAAGTGTAACGTTTGTGAATACACAAGCAAATCGGGCAAGGATTTGAAAATACACGTGTCATCACATGCACCCTGA
Protein Sequence: MKQHMRIHSSRKPFACQICNGRFRFAGNLTRHMLVHSDKKQFVCDRCGYRCHDVGSLVQHMRIHTGERPFSCDLCPRKFQQSGNLKKHKLRHDGEKTIACEFCDYKGRSLEDVKRHAKRHNSEKPFKCALCDFKCARPAYLKRHLSRHSGEKRHKCHICNHECNQASNLRLHLLTHTDERPFKCERCEFASKTARYLKLHMRVHSDERPYKCDLCKYATKFQGNLQKHLTIHENLLKCNICEYTCKLARDLKKHMLSHADTDFWKILDTAERILIGLKSENEEGFVVTLGNALTIAVFQTEGKCSGVFKYTIPEGRTTEYDFISPEYVPNSPMQDPLVCKLCDYKCRSTKRMKERMKEHMKVHSNEKTFACEICNSKFRFSGNLRQHMLVHADEKQFVCDRCGYKCRSAGTLKKHVQKHVGEKLFSCDLCARKYQHSSNLKRHRLTHTGEKRFMCEFCDYRCLRSEYLKRHTLTHNGEKQFKCSLCDYECTQSAYLKRHMLMHTGEKNYKCHLCSYECNRAGNLGLHLLTHTDERPFKCEHCAYVAKTSRYLQVHMRVHSDEKPFKCGLCKYASRFSGNLQKHMSTHKKLLKSGISKPDAGDFDFKSPEHVPKYVLLNNGVRLFVCDLCDYKCQSVSSIKQHMRTHSDEKPFVCEICKHKTRFAGSLKQHMLTHTDEKHFVCDRCAYKCRTASILKQHMRKHTGEKPFGCNLCDQKFQRSGSLKRHTLTHTHEKPFSCERCHYRCRRLADLKHHLIIHDSEKSIKCGLCDYRCAQPAYLKRHMMTHTGEKNYKCHLCSYECNQSWNLRLHLSKHTDERPFKCEHCEYVSKTARHLKLHMRVHSDEKPYKCDLCKYATKFQGNLQKHMTTHEKLLKCNVCEYTSKSGKDLKIHVSSHAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467114;
90% Identity: iTF_00467114;
80% Identity: iTF_00467114;