Dpar032198.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus parallelipipedus
Gene Symbol
-
Assembly
GCA_958336345.1
Location
OY284481.1:2964199-2969892[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.24 23 7.1 0.7 1 20 167 186 167 188 0.95
2 38 0.041 3.7 9.6 2.3 1 23 192 214 192 214 0.96
3 38 0.04 3.7 9.6 0.5 2 21 264 283 263 284 0.93
4 38 0.09 8.3 8.5 1.0 1 23 288 310 288 310 0.96
5 38 0.84 78 5.4 3.6 2 21 329 348 328 349 0.95
6 38 0.072 6.6 8.8 1.4 1 23 353 375 353 375 0.97
7 38 0.21 19 7.3 2.3 2 21 417 436 416 437 0.95
8 38 0.012 1.1 11.2 2.1 1 23 441 463 441 463 0.98
9 38 0.0037 0.34 12.9 1.0 1 23 471 493 471 493 0.94
10 38 3.3e-05 0.003 19.3 4.3 1 23 499 521 499 521 0.98
11 38 0.019 1.7 10.6 1.3 1 23 530 552 530 552 0.97
12 38 0.00042 0.039 15.8 1.1 1 23 558 580 558 580 0.97
13 38 0.00014 0.012 17.4 1.8 1 23 586 608 586 608 0.98
14 38 1.8e-05 0.0016 20.2 2.8 1 21 614 634 614 637 0.96
15 38 3.7e-05 0.0034 19.2 0.3 1 23 643 665 643 665 0.94
16 38 6.7e-06 0.00062 21.5 1.8 1 23 672 694 672 694 0.98
17 38 2.3e-06 0.00021 23.0 1.4 3 23 702 722 700 722 0.96
18 38 0.001 0.097 14.6 1.7 1 21 728 748 728 749 0.96
19 38 0.011 0.97 11.4 0.9 2 19 888 905 887 908 0.94
20 38 0.25 23 7.1 4.9 1 23 912 934 912 934 0.97
21 38 0.0084 0.78 11.7 0.4 2 21 986 1005 985 1006 0.95
22 38 0.0037 0.34 12.9 2.3 1 23 1010 1032 1010 1032 0.98
23 38 0.14 13 7.9 3.2 2 21 1067 1086 1066 1087 0.94
24 38 0.016 1.5 10.8 1.6 1 23 1091 1113 1091 1113 0.97
25 38 0.00052 0.048 15.5 0.3 1 23 1120 1142 1120 1142 0.94
26 38 7.7e-05 0.0071 18.2 3.9 1 23 1148 1170 1148 1170 0.98
27 38 5.9e-05 0.0055 18.5 0.7 1 23 1179 1201 1179 1201 0.96
28 38 0.0033 0.3 13.0 0.2 2 20 1233 1251 1232 1253 0.95
29 38 0.032 3 9.9 1.1 1 23 1257 1279 1257 1279 0.98
30 38 0.13 12 8.0 0.8 2 20 1302 1320 1301 1322 0.94
31 38 0.067 6.2 8.9 1.4 1 23 1326 1348 1326 1348 0.97
32 38 0.0015 0.14 14.1 0.7 1 23 1354 1376 1354 1376 0.95
33 38 5.6e-07 5.2e-05 24.9 1.2 1 23 1382 1404 1382 1404 0.99
34 38 0.0011 0.1 14.5 2.3 1 23 1413 1435 1413 1435 0.97
35 38 0.019 1.8 10.6 0.9 3 23 1450 1470 1448 1470 0.91
36 38 0.001 0.096 14.6 7.7 1 23 1477 1499 1477 1499 0.98
37 38 2.2e-06 0.0002 23.0 1.5 1 23 1505 1527 1505 1527 0.97
38 38 9.1e-05 0.0084 17.9 0.9 1 23 1533 1555 1533 1555 0.98

Sequence Information

Coding Sequence
ATGGCTGAAGTATGCAGACTTTGTCTAAAGATGTTAGGAGATGCGTACTATTCCATCGATGAAAACGATGAAGTAAGAAGCCGAAGTAAAATTATGATGTTAATGCCAGAACTGGAACTTGATGTTGTCACCGAACCCGTTCTTTGTTCGTTATGTTATGGCAAATTACATGCGGCATATGAGTTCAAGTGCACCTGCCTAGCCAGCGAACAAAGAATTACTgagtatttaaaaaacgacaagCGTCCTCCAATCAATTTATGTGAATTATTAGAAGAAACTGATTCAAAGAGTGCGATTACCACGAGTTTACTGCTTGAGAATTTTGAGGCAAATACAACCGTGTTGGATGTTGTGAAAGAAGAGAACATATTAAAGCCAGAACCGTTGGAAGTTTTATGTGATTTTGAAAGTGTATATCACGGAACAAATGTGAGCAGCGTCGATGCAGAAAAAGACGAGGCAGGTAAAAGCAGTGGAACCCCAGTAAAGGATGGCTTTAAGTGTTCAAACTGCTCCAGTGAATTTACAGTCTTGAAAGAGTATAGAAAACACTTGGCGCAATGTGCAAGATATGAGTGTGATATGTGCAATAAAAAGTTTAAGTTGGAAACTAGATTTCTCAAACATAAAGCATCACATAATGCAGACATGCAAAGTGACTCAGACCAGGAAAAGTGTTCAAATCCTAAGCCAGAGCAAGATGAAAACAGAGAGGCAGTAATTGAACAATGTGTAAGTCCTAAATCTGAAGATAAAAGCAATCAGTCAATAATTAAAGGGGGtgttaaatgttcaaattgctcCACTGAATTTACAGTTTGGAAGTTATATAGAAAACATTTGGAGAAATGTGCCCCCTATGAGTGTGACATTTGCAGCAAGAAATTTATGTTAGAAGGGAGATTTCTACGACACAAGCtatcacataaattaagtagAGAGAAAGCAAAAAGCGATGACATGCAAATTAACTGTGGCATTAAGTGTTCTAAAtgccacaataaatttatgctcAAAAAAGATTATAAGAGACATTTAAAGCAATGTGCCCCCTTCGAATGTAAAATATGCAACAGGAAATTTATGTTGGAAGGAAGATTCATACAACATAAATTAACACACAGCACAgatgaagaagaaaatgtaaatgATATGACACATAAGGAAGTCGCTGTGAACCCCGAGAGAAATGAAGACAAAGATACTACTGAAAAAATCATTGAAACTGCAACTAAACCTGGAATTAAATGCTCAAAGTGCCGCATTAAATTTATGCTCAAAAAAGATTACACGAGACACATAAGGCACTGTGCTCCCTATCAGTGTGatgtttgcaataaaaaatttatgttagaAAATAGATTACGTAAACACAAGTTATCGCATAGCACAACTTCAGAGAAAACATTCCTGTGTGAAGTGTGCAGTAAAACGTTTCGAAAAGCATACCCTTTTAAACAGCACCTTCTGCTGCATACGGGGCGAAAACCTTTCAAATGCCCGATGTGCGAAAGAATGTTTCCAACAAAACACCACCTGCGTGCCCATAAGGAGACGCATTTAAATAAGCAAAGGGAGAAGCGGCATGTATGCGAAGTATGCGGAAAAAAGTTTATGACGCTGTTGATTTTGCGAAAACATAGAATCACCCACTCGAAAGAGAAAAAGTTTTTCTGTGAAATCTGTGGTAGGGGCTTTAATATCAAGATGTACTTACAGCAGCATTTGAAGAAGCATACGGGTGAGAAACCATATGCGTGCGACAAATGTAATTGGTGTTTCCCCTCAAAGAGTCGATTAGCAGAGCATTATCGTAGTCACACTGGAGAAAGACCATATAAATGTAATATGTGTGATAAAAGCTTTGCGCAAAGTAGCACATTAAGAGTGCACGTGCGTTGCACTCACACAAATGAGAAACCTTTCAGTTGTGAGGTGTGTGGAAAACGTTTTACTCTGAAGGGAAACCTTCGAGCGCATTCGATTTTACATAATGAAAACGCCGAGAAATTTCCTTGCACCTACTGTGACAAATCCTTTTATGTAAATAAGGACCTAAAGCGGCATGTTCAGAGACACATAGGAAAGCCAACGCATTTGTGTTCTGTGTGTGGTAAAGGTTTCTTTACACCTGACGAATTGAAAAAACACATGAGAAGTCATACCGGTGAAAAACCTTTCGAGTGTGAAGTCTGCCATCAGAGATACACTCAGCGGTACACCTTGCATGTGCATATGAAAGCGTTAGATGTTGTACCTGACCCCATTATTTGCTCCATGTGTTACGGTACATTGCAGGTTGCCTACGAATTCAAGCGCAACTGTCTAGCGAATGAGCAAAGACTCACCGAATACTTGAGAAATAACAAGAACCGTCTGATTAACTTGTGTGATTTGTTGCAAGGGAACGACTCAAAAAGTGTGTTTGCGGCAAATTTTCCAGGCGACAGTTACGATGGAAACGAAAACGCATCTACTTTTGTGCATATAAAAGAAGAATATAAAACAGAGCCATCGGAAGTTCTATGCGAATTCGAAAGTATTTATGAGGACTCATAccaagaaacaaacaaaagctTTAATGAAGAAAAGAATGGAAAAGAAGTAAATGATGGTACAGTAGGTAACAAAACAGGTGAACCCCCAACTAagggaattaaatgctcaaGGTGCTCTCGCGAGTTTACCACTTGGAAGGAATATAAAAAACACTCTTTACAATGCTCCCCATATGAGTGCGATGtgtgtaaaaagaaatttaagttAAACTGTAGATTTTTGAAACATAAGGCAATGCATAACACAAATGCTGAAAAGAATGGACAAGAAGAAGATTCAAGTAACGAAATGAGCATGAGCCCAAAGCCCGAAGAAGGAGGAGAACAAGAAGGTGAAGAAGAAGTAGATGACAAGGCAGACAAAAGTAGCAGTGGTTTAATTAAGGGGCGTGTTAAATGCTCGAACTGCTCAACTGAATTTACAGTTTGGAAAGATTACAGGAAACACATAAAACTATGTGCTCCATACAAGTGTGAcatatgcaaaaaaaaattcataaaggaAGGTAGATTTTTACGACATAAATTAATGCATAGGGCAAACACAGACAAAAGCGATGCAAAAGAAAACACCCATAAGACTGATGAAGATTGCGCAGCAGACAAAAGCGATGAAGCTGAAATTAATGTCGGCATTAAATGTTCGAGGTGTCACAATAAATTCATGCAGAAAAGAGATTACAGGAGGCACATACAAAAATGTGCGCCTTATCAATGCGACGTATGCAATAAGAAATTTATGTTAGAAACCAGACTTCAACAGCATAAACTATCGCATAAAAGAGAACAAAAAACGTTCCTATGTGAAATATGTAGTAAGACTTTTCGGCAAGCTTACCTTTTGGGCCAGCATCTCCTATTGCATTCCGGCTTGAAACCCTACAAATGCCAGAAATGTGACAAAGCATTTGCAACACGAAATCACTTCCGTATGCATCAACAGGCGCACttgatgaaagaaaaaagaaacgtgCACGCGTGTGATATGTGTGACAAAAAGTTTCCTAACGTTCAGTTGTTGTGGAGGCACATCAACACCCATTCCTATGTGAATTTAAACAAAGAACCGAGCTCCGAGAAAGACAAAGACGAACAAGGGAATAAAACATGTTCGTCCCTCATTAGAGGCAGTGTTAAGTGTTCGAATTGCTCCACCGTATTTGTGGATTGGAAGGAGTACAGGAATCATATGGATCAATGTGCAACCTACGAGTGCGACATATGTCTCAAGAAATTCATAAAGGAAGGTAGATAtctcaaacacaagttaacacATAAAATAAACACCGAGGAAACAAATACAGGAGATAAAAGCGGCGAAATTGAAATCAATGTCGGCATTAAATGTTCGATTTGTCGCAACAAATTTATGACCAAGAAGGATTATAGGAAACACGTCGATCAATGTGCTCCCTATCAGTGCGATGTATgcagtaaaaaatttattttagaaactaGATTTGAACAACATAAGCTATCGCATAAGGAAGAGAAAACGTACTTGTGTGATGTGTGCAGTAAAACTTTTAAGAAATCGTATCTCTTGGGACAGCATCTCTTGTTACATTCAGGGCGAAAACCATATCAGTGCCCAACATGCGGGAAGGCATTTCCAACAAGAAATCAGTACCGTATGCATCAACGTACACATTTAACCAAGCCTAAGGAAAGGGGGCACACATGTGAAATATGTGAGAGAAAGTTTCCTAGCTTGCAATTCTTACGAAGGCATACGAGAGCTCACTTGCAGGAGAAGAAGATGCATACTGGGGAAGAGCCTTATGGTTGTGACGAATGCGGAGAAAGgtttaatttgaaaagtgaCTTGCATGTGCACTCATTTTTACATACTGAAAATGCCAAGAGATTTCCTTGCCTATATTGCCACAAAACGTTTTTCCTTAGCAAGCACTTGAAGCGACATATTAAAAGGCATGTAGAGCTGCCTTCGCATATTTGTGTTGTTTGTGGAAAGCGTTTCGGTGAATCTAGTTCCTTGAAGAGACATATGAGAACGCACACCGGTGAAAAACCTTTTGAATGTGAAGTCTGCTATGAAAAGTTCAGGTATCAGTACACTTTATTAGTGCATATGAAAATACATTCAGAAGGTacttga
Protein Sequence
MAEVCRLCLKMLGDAYYSIDENDEVRSRSKIMMLMPELELDVVTEPVLCSLCYGKLHAAYEFKCTCLASEQRITEYLKNDKRPPINLCELLEETDSKSAITTSLLLENFEANTTVLDVVKEENILKPEPLEVLCDFESVYHGTNVSSVDAEKDEAGKSSGTPVKDGFKCSNCSSEFTVLKEYRKHLAQCARYECDMCNKKFKLETRFLKHKASHNADMQSDSDQEKCSNPKPEQDENREAVIEQCVSPKSEDKSNQSIIKGGVKCSNCSTEFTVWKLYRKHLEKCAPYECDICSKKFMLEGRFLRHKLSHKLSREKAKSDDMQINCGIKCSKCHNKFMLKKDYKRHLKQCAPFECKICNRKFMLEGRFIQHKLTHSTDEEENVNDMTHKEVAVNPERNEDKDTTEKIIETATKPGIKCSKCRIKFMLKKDYTRHIRHCAPYQCDVCNKKFMLENRLRKHKLSHSTTSEKTFLCEVCSKTFRKAYPFKQHLLLHTGRKPFKCPMCERMFPTKHHLRAHKETHLNKQREKRHVCEVCGKKFMTLLILRKHRITHSKEKKFFCEICGRGFNIKMYLQQHLKKHTGEKPYACDKCNWCFPSKSRLAEHYRSHTGERPYKCNMCDKSFAQSSTLRVHVRCTHTNEKPFSCEVCGKRFTLKGNLRAHSILHNENAEKFPCTYCDKSFYVNKDLKRHVQRHIGKPTHLCSVCGKGFFTPDELKKHMRSHTGEKPFECEVCHQRYTQRYTLHVHMKALDVVPDPIICSMCYGTLQVAYEFKRNCLANEQRLTEYLRNNKNRLINLCDLLQGNDSKSVFAANFPGDSYDGNENASTFVHIKEEYKTEPSEVLCEFESIYEDSYQETNKSFNEEKNGKEVNDGTVGNKTGEPPTKGIKCSRCSREFTTWKEYKKHSLQCSPYECDVCKKKFKLNCRFLKHKAMHNTNAEKNGQEEDSSNEMSMSPKPEEGGEQEGEEEVDDKADKSSSGLIKGRVKCSNCSTEFTVWKDYRKHIKLCAPYKCDICKKKFIKEGRFLRHKLMHRANTDKSDAKENTHKTDEDCAADKSDEAEINVGIKCSRCHNKFMQKRDYRRHIQKCAPYQCDVCNKKFMLETRLQQHKLSHKREQKTFLCEICSKTFRQAYLLGQHLLLHSGLKPYKCQKCDKAFATRNHFRMHQQAHLMKEKRNVHACDMCDKKFPNVQLLWRHINTHSYVNLNKEPSSEKDKDEQGNKTCSSLIRGSVKCSNCSTVFVDWKEYRNHMDQCATYECDICLKKFIKEGRYLKHKLTHKINTEETNTGDKSGEIEINVGIKCSICRNKFMTKKDYRKHVDQCAPYQCDVCSKKFILETRFEQHKLSHKEEKTYLCDVCSKTFKKSYLLGQHLLLHSGRKPYQCPTCGKAFPTRNQYRMHQRTHLTKPKERGHTCEICERKFPSLQFLRRHTRAHLQEKKMHTGEEPYGCDECGERFNLKSDLHVHSFLHTENAKRFPCLYCHKTFFLSKHLKRHIKRHVELPSHICVVCGKRFGESSSLKRHMRTHTGEKPFECEVCYEKFRYQYTLLVHMKIHSEGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00465158;
90% Identity
iTF_00465158;
80% Identity
-