Basic Information

Insect: Dorcus hopei
Gene Symbol: -
Assembly: GCA_033060865.1
Location: CM065419.1:41827807-41834463[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 0.087 9.6 8.4 0.4 1 20 167 186 167 188 0.95

2 37 0.0079 0.87 11.6 2.3 1 23 192 214 192 214 0.97

3 37 2.1 2.3e+02 4.0 0.4 2 20 264 282 263 284 0.90

4 37 0.078 8.6 8.5 1.0 1 23 288 310 288 310 0.96

5 37 0.73 80 5.5 3.6 2 21 329 348 328 349 0.95

6 37 0.062 6.8 8.8 1.4 1 23 353 375 353 375 0.97

7 37 0.18 20 7.4 2.3 2 21 417 436 416 437 0.95

8 37 0.011 1.2 11.2 2.1 1 23 441 463 441 463 0.98

9 37 0.0032 0.35 12.9 1.0 1 23 471 493 471 493 0.94

10 37 2.8e-05 0.0031 19.3 4.3 1 23 499 521 499 521 0.98

11 37 0.002 0.22 13.5 1.6 1 23 530 552 530 552 0.97

12 37 0.00012 0.013 17.4 2.3 1 23 558 580 558 580 0.97

13 37 1.9e-05 0.0021 19.9 3.2 1 21 593 613 593 616 0.96

14 37 6e-05 0.0066 18.3 0.3 1 23 622 644 622 644 0.91

15 37 1.2e-05 0.0013 20.6 1.0 2 23 652 673 651 673 0.96

16 37 2e-06 0.00022 23.0 1.4 3 23 681 701 679 701 0.96

17 37 0.0005 0.056 15.4 1.8 1 21 707 727 707 728 0.96

18 37 0.0091 1 11.5 0.7 2 19 867 884 866 886 0.95

19 37 0.22 24 7.1 4.9 1 23 891 913 891 913 0.97

20 37 0.0072 0.8 11.8 0.4 2 21 966 985 965 986 0.95

21 37 0.0031 0.35 12.9 2.3 1 23 990 1012 990 1012 0.98

22 37 0.12 14 7.9 3.2 2 21 1047 1066 1046 1067 0.94

23 37 0.014 1.6 10.9 1.6 1 23 1071 1093 1071 1093 0.97

24 37 0.00045 0.05 15.6 0.3 1 23 1100 1122 1100 1122 0.94

25 37 6.6e-05 0.0074 18.2 3.9 1 23 1128 1150 1128 1150 0.98

26 37 5.1e-05 0.0056 18.5 0.7 1 23 1159 1181 1159 1181 0.96

27 37 0.0028 0.31 13.1 0.2 2 20 1213 1231 1212 1233 0.95

28 37 0.028 3.1 9.9 1.1 1 23 1237 1259 1237 1259 0.98

29 37 0.11 12 8.1 0.8 2 20 1282 1300 1281 1302 0.94

30 37 0.058 6.4 8.9 1.4 1 23 1306 1328 1306 1328 0.97

31 37 0.0013 0.14 14.1 0.7 1 23 1334 1356 1334 1356 0.95

32 37 4.8e-07 5.3e-05 24.9 1.2 1 23 1362 1384 1362 1384 0.99

33 37 0.00096 0.11 14.5 2.3 1 23 1393 1415 1393 1415 0.97

34 37 0.012 1.3 11.1 1.0 3 23 1430 1450 1428 1450 0.91

35 37 0.0009 0.1 14.6 7.7 1 23 1457 1479 1457 1479 0.98

36 37 1.9e-06 0.00021 23.1 1.5 1 23 1485 1507 1485 1507 0.97

37 37 0.00013 0.014 17.3 2.0 1 23 1513 1535 1513 1535 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	0.087	9.6	8.4	0.4	1	20	167	186	167	188	0.95
2	37	0.0079	0.87	11.6	2.3	1	23	192	214	192	214	0.97
3	37	2.1	2.3e+02	4.0	0.4	2	20	264	282	263	284	0.90
4	37	0.078	8.6	8.5	1.0	1	23	288	310	288	310	0.96
5	37	0.73	80	5.5	3.6	2	21	329	348	328	349	0.95
6	37	0.062	6.8	8.8	1.4	1	23	353	375	353	375	0.97
7	37	0.18	20	7.4	2.3	2	21	417	436	416	437	0.95
8	37	0.011	1.2	11.2	2.1	1	23	441	463	441	463	0.98
9	37	0.0032	0.35	12.9	1.0	1	23	471	493	471	493	0.94
10	37	2.8e-05	0.0031	19.3	4.3	1	23	499	521	499	521	0.98
11	37	0.002	0.22	13.5	1.6	1	23	530	552	530	552	0.97
12	37	0.00012	0.013	17.4	2.3	1	23	558	580	558	580	0.97
13	37	1.9e-05	0.0021	19.9	3.2	1	21	593	613	593	616	0.96
14	37	6e-05	0.0066	18.3	0.3	1	23	622	644	622	644	0.91
15	37	1.2e-05	0.0013	20.6	1.0	2	23	652	673	651	673	0.96
16	37	2e-06	0.00022	23.0	1.4	3	23	681	701	679	701	0.96
17	37	0.0005	0.056	15.4	1.8	1	21	707	727	707	728	0.96
18	37	0.0091	1	11.5	0.7	2	19	867	884	866	886	0.95
19	37	0.22	24	7.1	4.9	1	23	891	913	891	913	0.97
20	37	0.0072	0.8	11.8	0.4	2	21	966	985	965	986	0.95
21	37	0.0031	0.35	12.9	2.3	1	23	990	1012	990	1012	0.98
22	37	0.12	14	7.9	3.2	2	21	1047	1066	1046	1067	0.94
23	37	0.014	1.6	10.9	1.6	1	23	1071	1093	1071	1093	0.97
24	37	0.00045	0.05	15.6	0.3	1	23	1100	1122	1100	1122	0.94
25	37	6.6e-05	0.0074	18.2	3.9	1	23	1128	1150	1128	1150	0.98
26	37	5.1e-05	0.0056	18.5	0.7	1	23	1159	1181	1159	1181	0.96
27	37	0.0028	0.31	13.1	0.2	2	20	1213	1231	1212	1233	0.95
28	37	0.028	3.1	9.9	1.1	1	23	1237	1259	1237	1259	0.98
29	37	0.11	12	8.1	0.8	2	20	1282	1300	1281	1302	0.94
30	37	0.058	6.4	8.9	1.4	1	23	1306	1328	1306	1328	0.97
31	37	0.0013	0.14	14.1	0.7	1	23	1334	1356	1334	1356	0.95
32	37	4.8e-07	5.3e-05	24.9	1.2	1	23	1362	1384	1362	1384	0.99
33	37	0.00096	0.11	14.5	2.3	1	23	1393	1415	1393	1415	0.97
34	37	0.012	1.3	11.1	1.0	3	23	1430	1450	1428	1450	0.91
35	37	0.0009	0.1	14.6	7.7	1	23	1457	1479	1457	1479	0.98
36	37	1.9e-06	0.00021	23.1	1.5	1	23	1485	1507	1485	1507	0.97
37	37	0.00013	0.014	17.3	2.0	1	23	1513	1535	1513	1535	0.98

Sequence Information

Coding Sequence: ATGGCTGAAGTATGCAGACTTTGTCTAAAGATGTTAGGAGATGCGTACTATTCCATCGATGAAAACGCTGAAATAAGAAGCCGAAGTAAAATTATGATGTTAATGCCAGAACTGGAACTTGATGTTGTCGCTGAACCCGTTCTTTGTTCGTTATGTTACGGCAAATTACATGCGGCATATGAGTTCAAGTGCACCTGCCTAGCCAGCGAACAAAGAATTACtgagtatttaaaaaacgacaagCGCCCTCCAATTAATTTATGTGAATTATTAGAAGAAACTGATTCAAAGAGTGCGATTACCACGAGTTTACTGCTTGAGAATTTTGAGGCAAATACAACCGTGTTGGATGTTGTGAAAAAAGAGAACGTGTTAAAGCCAGAACCGTTGGAAGTTTTATGCGATTTTGAAAGTGTATATCAAGAAACAAATGTGAGCAGTGTCGATGCAGAAAAAGATGAGGCAGATAAAAGCAGTGAAACCCCAGCAAAGGATGGCTTTAAGTGTTCAAACTGCCCCAGTGAGTTTACAGTCTTGAAAGAATATAGAAAACACTTAGCGCAATGTGCACGATATGAGTGTGATATGTGCAATAAAAAGTTTAAGTTGAAAGCTAGATTTCTCAAACATAAGGCATCACATAATGCAGACATGCAAAGTGACTCAGACCAGGAAAAGAGTTCAAGTCCTAAGCCAGAGCAAGATGAAAGCAGAGAGACAGTAATTGAACAATGTGTAAGTCCTAAATCAGAAGATAAAAGCAATCAGTCAATAATTAAAGGGGGCGTTAAATGTTCAAACTGCTCCACTGAATTTACAGTTTGGAAGATATATAGAAAACATTTGGAGAAATGTGCCCCCTATGAGTGTGACATTTGCAGCAAGAAATTTATGTTAGAAGGGAGATTTCTACGACACAAGCTATCACATAAATTAACTAGAGGGAAAGCAAAAAGCGATGACATGCAAATTAACTGTGGCATTAAGTGTTCTAAATGCCACAATAAATTTATGCTCAAAAAAGATTATAAGAGACATTTAAAGCAATGTGCTCCCTTCGAATGTAAAATATGCAACAGGAAATTTATGTTGGAAGGAAGATTTATACAACATAAATTAACACACAGCACAGATGAAGAAGAAAATGTAAATGATATGACAGATAAGGAAGTCGCTGTGAACCCCGAGAGAAATGAAAACAAAGATACTACAGAAAAAATCAGTGAAACTGCAACTAAACCTGGAATTAAGTGCTCAAAGTGCCGCATTAAATTTATGCTCAAAAAGGATTACACGAGACACATAAGGCATTGTGCTCCCTATCAGTGTGatgtttgcaataaaaaatttatgttagaaAATAGATTACGTAAACACAAGTTATCACATAGTACAACTTCAGAGAAAACATTCCTGTGTGAAGTGTGCAGTAAAACGTTTCGAAAAGCATACCCTTTTAAACAGCACCTTCTGTTGCATACGGGGCGTAAACCTTTCAAATGTCCGATGTGCGAAAGAATGTTTCCAACAAAACACCACCTGCGTGCCCATAAAGAGACGCATTTAAATAAGCAAAGGGAGAGGCGGCATGTATGCGAAGTATGCGGAAAAAAGTTTACGACGCTGTTGATTTTGCGAAAACATAGAATCACCCACTCGAAAGAGaaaaaatttttctgtaaaatctGTGATAAGGGCTTTAATATCAAGATGTACTTACAGCAGCATATGAAGAAGCATACGGAGCATTATCGTAGTCACACTGGAGAAAGACCATATAAATGTAAGATGTGTGATAAAAGCTTTGCGCAAAGTAGTACATTAAGAGTGCACGTACGTTGCACTCACTCAAATGAGAAGCCCTTCAGTTGTGAGGTGTGTGGAAAACGTTTTACTCTGAAGGGCAACCTTCGAGCGCATTCGGTTTTACATATGGAAAACGCCGAGAAATTACCTTGCACCTATTGTGACAAATCCTTTTACGTAAATAAGGACCTAAAGCGGCATGTTCAGAGACACATAGGAAAGCCAACGCATTTGTGTTCTGTGTGTGGTAAAGGTTTCTTTACACCTGACGAATTGAAAAAACACATGAGAAGTCATACCGGTGAAAAACCTTTCGAGTGTGAAATCTGCCATCAGAGATACACTCAGCGGTACACCTTGCATGTGCATATGAAAGCGTTAGATGTTGTACCTGACCCCATTATTTGCTCCATGTGTTACGGTACATTGCAGGTTGCTTACGAATTCAAGCGCAACTGTCTAGCGAATGAGCAAAGGCTCACCGAATACTTGAGGAATAACAAGAACCGTCTGATTAACTTGTGTGATTTGTTGCAAGGGAACGACTCTAAAAGTGTGTTTGCGGCAAATTTTCCAGGCGACAGTTACGATGGAAATGAAAACGCATCTACTTTTGTGCATATAAAAGAAGAATATAAAACAGAGCCATCGGAAGTTCCATGCGAGTTCGAATGTATTTATGAGGACTCATAtcaagaaacaaacaaaagctTTAATGAAGAAAAGAATGGAAAAGAAGTAAATGATGGTACAATAGGTAACAAAACTGGTGAACCCCCAACTAAGGGCATTAAATGCTCAAGGTGCTCTCGTGAGTTTACCACTTGGAAGGAATATAAAAAACACTCTATACAATGTGCCCCATATGAGTGTGATGTGTGTAAAAAGAAGTTTAAGTTAAACTGTAGATTTTTGAAACATAAGGCGATGCATAACACAAATACTGAAAAGAATGGACAAGAAGAAGATTCAAGTAATGAAATGAGCATGAGCCCAAAGcccgaagaagaagaagaagaacaagaaggTGAAGAAGAAGTAGATGACAAAGCAGATAAAAGTAGCAGTGGTTTAATTAAGGGGCGTGTTAAATGCTCGAACTGCTCAACTGAATTTACAGTTTGGAAAGATTACAGGAAACACATAAAACTATGTGCTCCATACAAGTGTGACATATGCAAAAAGAAATTCATAAAGGAAGGTAGATTTTTACGACATAAATTAATGCATAGGGCAGACACAGACAAAAGCGATGCAAAAGAAAACACCTGTAAGACTGATGAAGATTGCGCAGCAGACAAAAGCGATGAAGCCGAAATTAATGTCGGCATTAAATGTTCAAGGTGTCACAATAAATTCATGCAGAAAAGAGATTATAGGAGGCACATACAAAAATGTGCACCTTATCAATGCGACGTATGCAATAAGAAATTTATGTTAGAAACCAGGCTTCAACAGCATAAACTGTCGCATAAAAGAGAACAGAAAACGTTCTTGTGTGAAATATGTAGTAAGACTTTTCGGCAAGCTTACCTTTTGGGGCAGCATCTCCTATTGCATTCCGGCTTGAAACCATACAAATGCCAGAAATGTGACAAAGCATTTGCAACACGAAATCACTTCCGTATGCATCAACAGGCGCACTtgatgaaagaaaaaagaaacgtgCATGCATGTGATATGTGTGATAAAAAATTCCCTAACGTTCAGTTGTTGTGGAGGCACATCAACACCCATTCCTATGtgaatttaaacaaagaaaCGAGCTCCGAGAAAGACAAAGATGAACAAGGGAATAAAACATGTTCGTCCCTCATTAGAGGCAGTGTTAAGTGTTCGAACTGCTCCACCGTATTTGTGGATTGGAAGGAGTACAGGAATCACATGGATCAATGTGCAACCTACGAGTGCGACATATGTctcaaaaaattcataaaggAAGGTAGATAtctcaaacacaagttaacacataaaataaacaCCGAGGAAACAAATACAGGAGATAAAAGCGGCGAAATTGAAATCAACGTCGGCATTAAATGTTCGATCTGTCGCAATAAATTTATGACCAAGAAGGATTATAGGAAACACGTAGATCAATGTGCTCCCTATCAGTGCGATGTATgcagtaaaaaatttattttagaaactaGATTTGAACAACATAAGCTATCGCATAAGGAAGAGAAAACGTACTTGTGTGATGTGTGCAGTAAAACTTTTAAGAAATCGTATCTGCTGGGACAGCATCTCTTGTTACACTCAGGCCGAAAACCATATCAGTGCCCAACGTGCGGGAAGGCATTTCCAACAAGAAATCAGTACCGCATGCATCAACGTACACATTTAACCAAGCCTAAGGAAAGGGGGCACACATGTGAAATATGCGAGAGAAAGTTTCCTAGCTTGCAATTCCTACGAAGGCATACGAGAGCTCACTTGCAGGAGAAGAAGATGCATACAGGGGAAGAGCCTTACGGTTGTGACGACTGCGGAGAAAGGTTTAATTTGAAAAGTGACTTGCACGTGCACTCATTTTTACATACTGAAAATGCCAAGAGATTTCCTTGCCTATATTGCCACAAAACGTTTTTTCTTAGCAAGCACTTGAAGCGACATATTAAAAGGCATGTAGAGCTGCCTTCACATATATGCGTTGTTTGTGGAAAGCGTTTCGGCGAATCTAGTTCCTTGAAGAGACATATGAGAacgcacaccggtgagaaaccTTTTGAATGTGAAGTCTGCCATGAAAAGTACAGGTATCAGTACACTTTATTAGTGCATATGAAAATACATTCAGAAGGTACTTGA
Protein Sequence: MAEVCRLCLKMLGDAYYSIDENAEIRSRSKIMMLMPELELDVVAEPVLCSLCYGKLHAAYEFKCTCLASEQRITEYLKNDKRPPINLCELLEETDSKSAITTSLLLENFEANTTVLDVVKKENVLKPEPLEVLCDFESVYQETNVSSVDAEKDEADKSSETPAKDGFKCSNCPSEFTVLKEYRKHLAQCARYECDMCNKKFKLKARFLKHKASHNADMQSDSDQEKSSSPKPEQDESRETVIEQCVSPKSEDKSNQSIIKGGVKCSNCSTEFTVWKIYRKHLEKCAPYECDICSKKFMLEGRFLRHKLSHKLTRGKAKSDDMQINCGIKCSKCHNKFMLKKDYKRHLKQCAPFECKICNRKFMLEGRFIQHKLTHSTDEEENVNDMTDKEVAVNPERNENKDTTEKISETATKPGIKCSKCRIKFMLKKDYTRHIRHCAPYQCDVCNKKFMLENRLRKHKLSHSTTSEKTFLCEVCSKTFRKAYPFKQHLLLHTGRKPFKCPMCERMFPTKHHLRAHKETHLNKQRERRHVCEVCGKKFTTLLILRKHRITHSKEKKFFCKICDKGFNIKMYLQQHMKKHTEHYRSHTGERPYKCKMCDKSFAQSSTLRVHVRCTHSNEKPFSCEVCGKRFTLKGNLRAHSVLHMENAEKLPCTYCDKSFYVNKDLKRHVQRHIGKPTHLCSVCGKGFFTPDELKKHMRSHTGEKPFECEICHQRYTQRYTLHVHMKALDVVPDPIICSMCYGTLQVAYEFKRNCLANEQRLTEYLRNNKNRLINLCDLLQGNDSKSVFAANFPGDSYDGNENASTFVHIKEEYKTEPSEVPCEFECIYEDSYQETNKSFNEEKNGKEVNDGTIGNKTGEPPTKGIKCSRCSREFTTWKEYKKHSIQCAPYECDVCKKKFKLNCRFLKHKAMHNTNTEKNGQEEDSSNEMSMSPKPEEEEEEQEGEEEVDDKADKSSSGLIKGRVKCSNCSTEFTVWKDYRKHIKLCAPYKCDICKKKFIKEGRFLRHKLMHRADTDKSDAKENTCKTDEDCAADKSDEAEINVGIKCSRCHNKFMQKRDYRRHIQKCAPYQCDVCNKKFMLETRLQQHKLSHKREQKTFLCEICSKTFRQAYLLGQHLLLHSGLKPYKCQKCDKAFATRNHFRMHQQAHLMKEKRNVHACDMCDKKFPNVQLLWRHINTHSYVNLNKETSSEKDKDEQGNKTCSSLIRGSVKCSNCSTVFVDWKEYRNHMDQCATYECDICLKKFIKEGRYLKHKLTHKINTEETNTGDKSGEIEINVGIKCSICRNKFMTKKDYRKHVDQCAPYQCDVCSKKFILETRFEQHKLSHKEEKTYLCDVCSKTFKKSYLLGQHLLLHSGRKPYQCPTCGKAFPTRNQYRMHQRTHLTKPKERGHTCEICERKFPSLQFLRRHTRAHLQEKKMHTGEEPYGCDDCGERFNLKSDLHVHSFLHTENAKRFPCLYCHKTFFLSKHLKRHIKRHVELPSHICVVCGKRFGESSSLKRHMRTHTGEKPFECEVCHEKYRYQYTLLVHMKIHSEGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00466585;
90% Identity: iTF_00466585;
80% Identity: -