Basic Information

Gene Symbol
Trerf1
Assembly
GCA_958336345.1
Location
OY284479.1:36912140-36947518[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-10 7.5e-07 30.6 0.1 2 46 1259 1303 1258 1303 0.96

Sequence Information

Coding Sequence
ATGAAAGAGCGGCGAATTTTGAAGGGATTCGACGCCTGGGAATACTTAAAAGCAAACCGTGCAATTCCTGTTATCGTAAAAAGGCCTCTCTCGCAGCCGATAAATATTCCTCGAGGTGTTCATGAGCTGGCAGGCGTTCGGTTGCCCCTTCAACCCTATCCTGGAGCACACGCGGTGTTTATGTATAGCACCGCCGCTGATGGTAACGTAACACTCCAGTTGAAAGAGCCGGATGACCTGGACCGCTCGAGCTTGGCGGCCATGCTGGCCCGTCTTCAGGACGACGCTTCCTTTTCCATATCTTACCAGGACACCGATATTTTATCTGATGGTAGCATCGATGTCCTCTTAGGAACTGGAACCGGTAACGTCCAAGGCTCAAGTGGAAACGAAACAGTTACTGCGACCTTTGACCTGTTCGATTCGTCGAGCGGACCCGACCTCACGTTATCTCCGCAGACGTTCACGAATTCCGCAGAGGCTTTCATCAACGACAATTCCAACAGCCTGGGAGTTCCGGCGGATAATGACCCAGTCTCGTCTTCGGAAGACAAGAAAGTTCCCGTATCTACTGAGGTGGTGAAGCTGTCGGTGAAGAGGGCGCGGCCCAAGGCGGCGTCTCCAAACAGACAGGGGCCCCAACAGTGCCAGGTTTGCGCGAAGGTCTTCGGCAACGCGTCCGCGCTCGCGAAGCACAAGCTGACTCACAGCGACGAGAGGAAATATGTCTGCACGATGTGCGGCAAGGCCTTCAAGCGGCAGGACCACCTCAACGGTCATATGTTAACCCACAGAAATAAGAAGCCCTACGAGTGCAAGGCGGAGGGTTGCGGCAAGTCGTACTGCGACGCCAGGTCACTGAGGAGGCACACGGAGAACCACCACAGTTCATCGTCTGTTAACGCCTCTACCACCATGTCACCGGCTCAGGGGGCTGCTTCTGGAGACGCCGCCTCTCCTCATGGTTCAAGCTGTATTCAATACGCACCACCCCCGACGAGTACACCCGGTGGAAAAAGTCAGCTTCAACAACTGTTAGCAACAGAGCCCGCGAAGGGAGGCGGCGGGGGCAGCAACGACGGTTTAACGAAGCAGCAATTAGACTTAATTCACCAAATCATGGAGCAAACACAGCGACAATCACAATCAAGCTCGAAATCGAGCGCGAAGCCCAGCTCGAAGCCAGTCAGCAAAACACCAGTCAAAGTACAGCGAATCTGGAGCTCCGCCACGCAACAGAACACAGCGCCCAAGGCAAACGCAAGCGCCTCCAGTCCTCAGTCTAAGGTATCCAGCACGACCTCCTCCAGCACCACCAACAGCGCGAACGCCAGCAAAAATGAACCCAAGCCAGTGGAATGTAACCTGTGTCACCGGAAGTTTAAGAACATTCCTGCCCTCAACGGACACATGCGGCTACACGGTGGATACTTCAAAAagGACACAGATAACAAAAAGTGTGAAAAGAAAGACGCAAGCGGTCCACCTCTGCAAACGGCGAGCGTCAGCGTACGCGCCCTCATCGAAGAGAAAATCATCAACAAGCGCATAACCAACCCTCAGACTCCCACGTCGGAAGAGGTACCAAGGTCTTCGGCTCCACCCCTATTCCCACTTACAGTGCATTCCTCTGCGACCTCAAGCGATATCGATTCGAAGATAACTTCGTTCGTGGTGCCCGCACCGCCCCAGCACACTGCAGAAAAGGCTCGAAGACATTCCGACGCGGAGGCTTTTACAGTCCCCAGAACCCCCAGCACACAGCAGGAGGCCGAAGCCTTGGCAGACCTCATCCTCAAAAGGGAGAAAGTTTCCGTCAAACGAACTACCTCTGATCCCGGTCAGACTCAACAGCCGCAACAGCAGATCATCCAGTTCCAATCGGGAGACTCTTTCACCCTGACGGGGGTGACCTACCAATCGGAAGATGGGGATTACCTATCGCCCAGCATCCAAGACGAGGTTTTCACGCAGGTCCAAGACACGATGTTGCTGCAAAGCGTCGATGCCCAACAGCTATCATCGATTCAGTTCCAAACTGATGGTCTTCTGCAAGACCACGCCGATCAACATTTGCAGGACATCGTGCTTGAGGACTACTCCCACCTACAGGATAACGTAGTCCAATCACCTTCTTACCAGTCCAATCACTCAGTGAACCAAGAACTGCAAGCTGTTTTAGACTCGCCCTTACCGGAAAGCCTAGCGGAATTCAGCACGTTTCACTCGACCACCAACATCGACATGCCCTCCCCAGGATACCAAACCCAATCCCCCGCACAGTATTCAGGTTCCCCTCATACATCATTAACAGCGCAGAGCCCTTTGCAGTCACCCCTGATACGTCACGATTCTCCCGGATTTGCCTACCCAACACCTCCGGCGAGTCACGAGGGCCAAAGTCCTTGCTTCGGGCAAAACTCCATCCTCCCGATGGTCTCCCCCAAACAGAACGAGTACAACCAAATCGTCAACGACACCCCTCAAACTTCGTTACTGGCGGCTGATTTCTTCACCACCACCATGTCGAGCTCTGCGGCCGTCGAAGAAGCCCTTGAAGAAGTCCTCCCGGGTGAAAACATCGAAGCGGACGATTTATACCCGAGTTTAACCAACTCGCCCCCGCCACAATCACCGATTTCCGTTGGCCTAACCCCAGTTCCGTCCCCGCTCAGCAACATCCCAAACTCATCCGCCTCGTCGCCTCACCCCCAAAATAATAACTTCGCCACCTCGCAAACGGCCAGCATCCAGTTTCCTCACTACACCCTGCAATCGCATATGATGCCCAATTCCGACGACCCCCTACTCTCGAGTAGCCCCAAGGATTTCCAGGCGAAGAAAAGGTTCGAATTCAACGGCTTCCCCTTGAAGGTCATCAGCAGCAACGGCATATTGGACAGCGCGAATTTCGCGGGGATCCTTCTGGACTCGAACGGCGAGATCAAGCTCATACAGACCGGAGGGAATACGTTCCAGACGAAGAACATCGTGCTCACCACGGGGACCCCCATCGTGACGTCGCAGAGCGCCCCCAAGGAAGAGGATTCAAAAATGCAGAAGCAGTTCAAGATTTTTAAGGCGACTCAAATCCCCGCTAAGGTTCCCTCAAAACTGAAATACGCCGGAGTTGATGGGGGAGTGAAACAAGAGGAGACCAACGACGTATTTCTGAGCCCGACGACAGTACCTGCAAGTCCTGTGCGAGTTTCCAGGAAACGGCCTAGATCGGAACCCCTGCAGCTTCCGGTTTTACATCACTCGAGGCTGCGAGCTACCAGGAGCAAACCCCAGGGGGCGGCACCGTACACGCCTCTGCCGATCCTGAATCCGACGAGGCAGGGATCTGGTCTGTATTGGTCGCTGAAACAAAAAATGTGTAATGaaACCTTTGAGAATCAAGAGTCTGTCAACAACTGGAACAACGAATCAATCCCGGAGACCGATTCTACGCCCCATATAAACGTCGGCCCCCAGTTTCAGTGCGCGATTCCCTCTTTTATTCCAATCCACGGCAGGCGTAGCCAGGAGGCCAGCCGTGAGGACCTGTTATGGGACCCGGGTATAAGCGGCTCCTCGGATCTCGAAGTTGACATGTACTTGGATTTCGCGTGCTGCGCGGCGATCCCAGGCGGAGGAAGGAACAAGGAGTACGCCATGCACGTGCTGTACCTGTGCGGCGGAAACATACACGATGCTATGTTGAAGATTATGCAGCCGGCGCCCTCGCTTCCCTTCGGCAATCCGTTGCATCAGTATCAGTACAATGATAGCGATAAGTGGACGGCATCAGAAACGGAACTTTTCCATCATGCTTTGCTCAAATATGATAAAGACTTTACATATGTTGCTCAAGAGATTGGAAGCAAAACTGTGAAACAGTGCGTCCAGTTTTACTACGTGTGGAAGAAGGTCTGCGTAGATGAATACAGGCGTGTGAAACAAGGGCGCGATAGAAAGAACGGTTACAATAGGGGCGCTGACAGTGACCATGAAGAGAAGCCCCTTCCTGATGCCAGATTGCTTGGGATCGCCGATGCAGGGTCACCAATGCCGTTGCAGGACCATCGGAACTTCATCTGCGAGTTCGCGGATTGCTCGGCTAGCTTCAACTCAAGGGCGGCCTTAAACGGTCACATACGCATCCACGGTGGCACGGCTCGGAATTCCCCGACGAGATCGCAGGTGTCGGACAGACGCCCTCCGTCGGTAACACCCACCCTATGTCACTCTGAATCACCCGAAGACTACCCCTGTAAGATATGCGGGAAAgtctttacaaaaataaaaagccGCAGCGCCCACATGAAGTCCCATCGTCCCCCGGACGCAGAGCCCGCCAAGCGAAGAGACAAGGACGCTGCCTTTTCCTCCTCTAACTTCGATATCTCCGCGACAAGCCCTTTCAGCACTTAG
Protein Sequence
MKERRILKGFDAWEYLKANRAIPVIVKRPLSQPINIPRGVHELAGVRLPLQPYPGAHAVFMYSTAADGNVTLQLKEPDDLDRSSLAAMLARLQDDASFSISYQDTDILSDGSIDVLLGTGTGNVQGSSGNETVTATFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVPADNDPVSSSEDKKVPVSTEVVKLSVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSSSVNASTTMSPAQGAASGDAASPHGSSCIQYAPPPTSTPGGKSQLQQLLATEPAKGGGGGSNDGLTKQQLDLIHQIMEQTQRQSQSSSKSSAKPSSKPVSKTPVKVQRIWSSATQQNTAPKANASASSPQSKVSSTTSSSTTNSANASKNEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTDNKKCEKKDASGPPLQTASVSVRALIEEKIINKRITNPQTPTSEEVPRSSAPPLFPLTVHSSATSSDIDSKITSFVVPAPPQHTAEKARRHSDAEAFTVPRTPSTQQEAEALADLILKREKVSVKRTTSDPGQTQQPQQQIIQFQSGDSFTLTGVTYQSEDGDYLSPSIQDEVFTQVQDTMLLQSVDAQQLSSIQFQTDGLLQDHADQHLQDIVLEDYSHLQDNVVQSPSYQSNHSVNQELQAVLDSPLPESLAEFSTFHSTTNIDMPSPGYQTQSPAQYSGSPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFGQNSILPMVSPKQNEYNQIVNDTPQTSLLAADFFTTTMSSSAAVEEALEEVLPGENIEADDLYPSLTNSPPPQSPISVGLTPVPSPLSNIPNSSASSPHPQNNNFATSQTASIQFPHYTLQSHMMPNSDDPLLSSSPKDFQAKKRFEFNGFPLKVISSNGILDSANFAGILLDSNGEIKLIQTGGNTFQTKNIVLTTGTPIVTSQSAPKEEDSKMQKQFKIFKATQIPAKVPSKLKYAGVDGGVKQEETNDVFLSPTTVPASPVRVSRKRPRSEPLQLPVLHHSRLRATRSKPQGAAPYTPLPILNPTRQGSGLYWSLKQKMCNETFENQESVNNWNNESIPETDSTPHINVGPQFQCAIPSFIPIHGRRSQEASREDLLWDPGISGSSDLEVDMYLDFACCAAIPGGGRNKEYAMHVLYLCGGNIHDAMLKIMQPAPSLPFGNPLHQYQYNDSDKWTASETELFHHALLKYDKDFTYVAQEIGSKTVKQCVQFYYVWKKVCVDEYRRVKQGRDRKNGYNRGADSDHEEKPLPDARLLGIADAGSPMPLQDHRNFICEFADCSASFNSRAALNGHIRIHGGTARNSPTRSQVSDRRPPSVTPTLCHSESPEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPAKRRDKDAAFSSSNFDISATSPFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00466866;
90% Identity
iTF_00466866;
80% Identity
iTF_00466866;