Dpar019488.1
Basic Information
- Insect
- Dorcus parallelipipedus
- Gene Symbol
- Foxk1
- Assembly
- GCA_958336345.1
- Location
- OY284478.1:26310959-26319156[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-42 1.7e-38 132.0 0.2 1 86 158 242 158 244 0.97
Sequence Information
- Coding Sequence
- ATGATGACATATGAAGGgTGCACATTTAGGTTTCCAAGTACAAATATACGACTATCGTTTCAATCTTTGGTTGATGAGAATAGCGAACCACCTCCAAAAGTCAGAGAAGTTTCACCGGTGAGGGTACGAGACAGGTCCGGTGGAGGATCAAACTCCGGAAGCTACCTGCCTCCTTTGAGGATAAATATCCCTGACTCAGACACTTACAGCAGTCCGTTCCCATCACCAACTGGTACGCTCAGTGCTGCCAATAGTTGCCCAGCTAGTCCTAGAGGTAGCCATAGAAATGTATCGGCCGATTTGCAAATGGTAGCAGCCTACGCTGCACAAGTAGCACATAGGAGTGATGATAGTCATCATATGCAATCCAGCCATAGTCCTGATCATTATAGGCAAGCCACATCAAATGGAAGCTCTATACCTCCAGTAGTAATTAACGACGGTTATGGTGCAAGTAGTAGCAAAGATGACTCCAAACCACCGTACTCGTATGCACAATTGATAGTTCAGGCAATTGCAAGTGCACCTGATAAACAACTGACTCTGTCAGGCATTTATAGCTACATCACTAAAAACTATCCGTACTACCGAACCGCAGATAAGGGCTGGCAAAACTCTATAAGGCACAACCTTAGTTTGAACCGATATTTTATTAAGGTGCCTAGAAGCCAGGAAGAGCCGGGAAAAGGCAGTTTTTGGCGGATAGATCCTCAGTCAGAATCAAAATTAATAGAGCAAGCATTTAGGAGGCGACGGCAAAGAGGCGTGCCTTGTTTTAGAGCGCCGTTTGGTTTGAGTTCAAGAAGTGCACCTGCATCTCCGAGTCATGTCAGCATGTCAGGACTTATGACCCCGGAATGCTTGTCGCGAGAAGGTTCTCCAGCTCCTGAACACATGTTAGAAATTAGTCAGTCTGCACCTGGTAGTCCAGGGAATACCAGTGTGGGATATCCGGGCTCAGGTGGTATGATTGGCCATCAGCAAATGTCTGCGCTGGTGGGGAGTACAAAAGCTAGGTTACTATTGCCTCATCGAGGCGAACCAGATCATGGACAGGGTTCTTCGAATGGACAAGAACATCATCGAGAAGAAAAGTACCATTTAGGAAGCCAAGGTGCCGTTATAGAGGAAAGATCATTATCTCCTGCTGCTTTCTCTCCTCAACCCGTTATCGTGCAAGCAACTAATTACTCTCCCTACAGTGGTAGCAATTATAACAATGCTGGCTTAGATTTGAAAAGACATGCAACGGATGATCAAAATATGGACAGTCCTGTTAGTAGTGGCGAAAATCAAGATAGTTTACAAGAGCCGGATATTAAGAGACCACGTTCTGAGCAGCAGTATGAAACAGAATAG
- Protein Sequence
- MMTYEGCTFRFPSTNIRLSFQSLVDENSEPPPKVREVSPVRVRDRSGGGSNSGSYLPPLRINIPDSDTYSSPFPSPTGTLSAANSCPASPRGSHRNVSADLQMVAAYAAQVAHRSDDSHHMQSSHSPDHYRQATSNGSSIPPVVINDGYGASSSKDDSKPPYSYAQLIVQAIASAPDKQLTLSGIYSYITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSESKLIEQAFRRRRQRGVPCFRAPFGLSSRSAPASPSHVSMSGLMTPECLSREGSPAPEHMLEISQSAPGSPGNTSVGYPGSGGMIGHQQMSALVGSTKARLLLPHRGEPDHGQGSSNGQEHHREEKYHLGSQGAVIEERSLSPAAFSPQPVIVQATNYSPYSGSNYNNAGLDLKRHATDDQNMDSPVSSGENQDSLQEPDIKRPRSEQQYETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01287011; iTF_00369383; iTF_01123496; iTF_00307379; iTF_00740622; iTF_01567634; iTF_01184308; iTF_01185987; iTF_00433848; iTF_01252536;
- 90% Identity
- -
- 80% Identity
- -