Basic Information

Insect: Dorcus hopei
Gene Symbol: Hivep2
Assembly: GCA_033060865.1
Location: CM065425.1:76708803-76713898[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0004 0.044 15.7 5.1 3 23 166 186 164 186 0.98

2 24 1.2e-05 0.0014 20.5 3.9 1 23 192 214 192 214 0.98

3 24 2.7e-06 0.0003 22.5 5.7 1 23 219 241 219 241 0.99

4 24 6.6e-05 0.0074 18.2 1.1 2 23 248 270 248 270 0.96

5 24 0.025 2.7 10.1 0.2 1 23 275 297 275 297 0.97

6 24 5.9e-05 0.0065 18.3 1.3 1 23 307 329 307 329 0.97

7 24 0.00039 0.043 15.8 0.1 1 23 335 357 335 357 0.98

8 24 0.00028 0.031 16.2 4.6 1 23 363 385 363 385 0.97

9 24 1.3e-05 0.0014 20.4 2.0 1 23 391 413 391 413 0.98

10 24 0.003 0.33 13.0 1.9 5 23 422 440 419 440 0.95

11 24 0.005 0.56 12.3 0.9 1 23 460 482 460 482 0.98

12 24 4.2e-05 0.0046 18.8 1.6 1 23 488 510 488 510 0.99

13 24 0.044 4.8 9.3 3.8 1 23 526 548 526 548 0.99

14 24 0.11 12 8.0 2.8 1 23 554 577 554 577 0.97

15 24 0.027 3 10.0 4.5 1 23 583 605 583 605 0.94

16 24 0.52 57 5.9 0.2 2 23 714 735 713 735 0.91

17 24 0.015 1.6 10.8 5.0 1 23 741 763 741 763 0.97

18 24 0.0052 0.58 12.2 1.9 1 23 769 791 769 791 0.91

19 24 0.00086 0.095 14.7 3.2 1 23 797 820 797 820 0.98

20 24 0.0012 0.13 14.2 3.0 1 23 832 855 832 855 0.95

21 24 0.015 1.7 10.8 0.8 3 23 866 886 865 886 0.98

22 24 1.6e-05 0.0017 20.1 4.2 1 23 892 914 892 914 0.98

23 24 3.7e-06 0.00041 22.1 0.8 1 23 920 942 920 942 0.98

24 24 0.2 22 7.3 0.1 1 21 948 968 948 969 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0004	0.044	15.7	5.1	3	23	166	186	164	186	0.98
2	24	1.2e-05	0.0014	20.5	3.9	1	23	192	214	192	214	0.98
3	24	2.7e-06	0.0003	22.5	5.7	1	23	219	241	219	241	0.99
4	24	6.6e-05	0.0074	18.2	1.1	2	23	248	270	248	270	0.96
5	24	0.025	2.7	10.1	0.2	1	23	275	297	275	297	0.97
6	24	5.9e-05	0.0065	18.3	1.3	1	23	307	329	307	329	0.97
7	24	0.00039	0.043	15.8	0.1	1	23	335	357	335	357	0.98
8	24	0.00028	0.031	16.2	4.6	1	23	363	385	363	385	0.97
9	24	1.3e-05	0.0014	20.4	2.0	1	23	391	413	391	413	0.98
10	24	0.003	0.33	13.0	1.9	5	23	422	440	419	440	0.95
11	24	0.005	0.56	12.3	0.9	1	23	460	482	460	482	0.98
12	24	4.2e-05	0.0046	18.8	1.6	1	23	488	510	488	510	0.99
13	24	0.044	4.8	9.3	3.8	1	23	526	548	526	548	0.99
14	24	0.11	12	8.0	2.8	1	23	554	577	554	577	0.97
15	24	0.027	3	10.0	4.5	1	23	583	605	583	605	0.94
16	24	0.52	57	5.9	0.2	2	23	714	735	713	735	0.91
17	24	0.015	1.6	10.8	5.0	1	23	741	763	741	763	0.97
18	24	0.0052	0.58	12.2	1.9	1	23	769	791	769	791	0.91
19	24	0.00086	0.095	14.7	3.2	1	23	797	820	797	820	0.98
20	24	0.0012	0.13	14.2	3.0	1	23	832	855	832	855	0.95
21	24	0.015	1.7	10.8	0.8	3	23	866	886	865	886	0.98
22	24	1.6e-05	0.0017	20.1	4.2	1	23	892	914	892	914	0.98
23	24	3.7e-06	0.00041	22.1	0.8	1	23	920	942	920	942	0.98
24	24	0.2	22	7.3	0.1	1	21	948	968	948	969	0.94

Sequence Information

Coding Sequence: atgcaaaattttacaGAATTACGCAGTCGTTTACTTATAATAAACAACCGCGTTGCCATCTATCACAACACCTTATACAACGCAAATTACAACTTCCAACCGCAAACAGAATCCCTCAACTTGCAATCAAAGTACTTCCTGATGATGGTCAACAAAGAACAGGCGCCTGTACTGCCAGAGAACAACTTGCTCGAGTCCGCCGTTGACCAACTGAACGACACAGACGCGGagcttttaaatttgttggCCGACGAGGGCGATTGCACCGACATACTGCAGAACATAGCGAACAATGAGCAGTTCGAACAGCTGATCAACAACGGCGCAGATTTTGGCGCCGCGGATAATTTGGCGCGCGAGCTCATGGGGCCGGAAAACTACGACGGGTTGTGCCGTACGATCCAAGAAGCTGACCTGAACGAGATCATCCTGGACGATATGGCGCCTGCGGTGAAGACACCGGATGAAAGCAAGCAGCCGCAGCAAGGCTTCGGATGTGAGCACTGCGATAAAGTTTGCACGACGAAGAAACTGCTGAAGTATCACCTGATGACGCACACGGGCGCCAGGCCCTACTCCTGCGACGTTTGCGGCAAGACGTTCAAGCATAACTACGAGGTGAAGACGCACAAGCGAAGTCACAATCGGCCGACCTTCCAGTGTGATATCTGCTCGAAGATGTTCATACACAAGTCACACTTGACCGCGCACAGGCGGAAGCACCTGGGCGATTTCGTCGCTTATTGTAAGGACTGCAACAAGGGTTTTATATCGCAGAGCACCTACAAGAACCACGTCAAAGTCCAGCACGAGAAGGTCCTGCACGTTTGCGACGTTTGTGGCGCGCAGTTGAGCTCCATGTCTGCCTTGAGCGAGCACAAGCTGACGCACGATCCGAACTATAAAAACCAACGGACGCACGTGTGCGAGATTTGCGGTAGGAGTTACCTGACGGCGAGGAACCTCCGCAGCCACATGAAGAGCCACACGCAATTGCACAATTTCATTTGCAACATCTGCGGTAAGGCGCTGAGCGGAAAGAAGGTGCTGGAGACGCACATAAagatacacaccggcgagaaggaCTTCGCCTGCCAGTACTGCAGCAAGTGTTTCAGCTCGAAGAAGTACGTGACCATACACGAGAGGACGCACACCGGCGATAAACCCTTTAAATGCGAAATTTGCAGTAAGTTGTTTACCCAGAAGACCTCGCTCAACGTTCACCTGAGGTACCACAGCGGAGAAAGGCCGTACAAGTGCCAGTGTGGTAAGGCGTTTGTTACCAAGACGCACCTGGTGGGGCACTATAAAACGCACGAGATTGAAACTGAGATGGCCGGAGAGGAATTCCCAACGAAACGGCTCGCGAAGTTGTTCATCTGCAGCGTCTGCAATTACCAGTCGGCGCACATCGCGAATTTCAGGCTGCACATGCGCAttcacaccggcgagaagccgttccaGTGCGCCACTTGCCCCTACAGCACCGGTAACAAAGGCAACTTCCGCAAGCACATGCgcaagcacaccggcgagaaaccgtacAAGTGCACCCTTTGCAAGTTTAAGAGGTACCGATGCGTTACCTGCGCCTACCAAACCGACCGCAGGGAGCATTACAAGCGACACCTTATGACGCACACGGGCGAGTGTCCGTACAAGTGCAAGTTCTGCAGCTACGGCACGATCCATCGCTGGCTCCTGTTGAGTCACGTGCGCAATAAACACACCGGCGAGGCGCGATACCGGTGCGATTCCTGCGATTACAGGTGCGACACGCTTTACCATCTAAACAGGCACAGCGTCGTCCATAAGTCGCTGCCGGTGGATGGTTACCCGGTCGACTTTTCGGTACAGTACGATTTAGCCGGACTTAACCCGCCGAAAACGGCCGGGGAATGCCTGAGGGTTAAGACTGAATTGTTCAGATCGATCGAAAGCGACCCGATTTTGAGGAAACTAATATTCGGGCCGTCGATGTCGATTACGATTAAGCAACGACCCACGAAACCGTCGGTGGCCATCGACGAAGAAGATTCGGAGTCGAAACGGCAGCAGCACCTCAAGCGGAAGCGCTTGAAGGAAAACATTGATTTGGGCGAGGGCCACAACGCCGGCGAGTTCAGCGAAGCGATCGAGTGCGAGATCTGCGAGAATACTTTCAAGGACAACCTGGAATTCGGACTGCACTCGATTAAGCACAGCGCCAACCAGAAGTTCTCCTGCCACATGTGCAAGTACTCGAGCGCTTCGAAGTACCACTTCGAGATGCACGTCCGGGCGCACGAGGGCACCACCAAGTATAAGTGCGAGATTTGCAACAAGGCCTTCACCGTCAGCACGCACGCCATCGAGCACAAGTACTtccacaccggcgagaaaccgttccaGTGCGAGATCTGCGGAAAACACTTCATGTTCTCCTGGTTTTTGTCTTCGCACCGCCGGTCGCAGCACTGGGAGATAATGACCGGAATGCCTTTGGTTAAATACGATTGCCTTATCTGCAACAAGCATTACACGAGCTCCACGGGTCTGAAGCGCCACAAAATCAGCAAGCACAACGACGGCTGCGCCGAGACTTCCGTGCTGTGCGACATCTGCGGGAAAAGGCTGGCCAGCAAGGAGAAGCTGAAGTTCCATCGCAGAATCCACACGGGGTATAAACCGTACTCGTGCGAGTTTTGCAGCAAGTGCTTCTCGCGCAAGGAGCAGCTTAAGGAGCACGAGAGGATCCACACGGGGGAAAAACCGTACATCTGCAAGTTTTGCGGAAAGGGCTTCACGCAAAGAAGCCCGCTGAGGATACATGAGAGGACTCACACCGGCGAGCGGCCTTACGTGTGCAGGCTATGCAACAAGGGCTACATCTCTAAAGGTGTGATGGACACTCACATGAAAAACTGCCAAGGTTTACTTTga
Protein Sequence: MQNFTELRSRLLIINNRVAIYHNTLYNANYNFQPQTESLNLQSKYFLMMVNKEQAPVLPENNLLESAVDQLNDTDAELLNLLADEGDCTDILQNIANNEQFEQLINNGADFGAADNLARELMGPENYDGLCRTIQEADLNEIILDDMAPAVKTPDESKQPQQGFGCEHCDKVCTTKKLLKYHLMTHTGARPYSCDVCGKTFKHNYEVKTHKRSHNRPTFQCDICSKMFIHKSHLTAHRRKHLGDFVAYCKDCNKGFISQSTYKNHVKVQHEKVLHVCDVCGAQLSSMSALSEHKLTHDPNYKNQRTHVCEICGRSYLTARNLRSHMKSHTQLHNFICNICGKALSGKKVLETHIKIHTGEKDFACQYCSKCFSSKKYVTIHERTHTGDKPFKCEICSKLFTQKTSLNVHLRYHSGERPYKCQCGKAFVTKTHLVGHYKTHEIETEMAGEEFPTKRLAKLFICSVCNYQSAHIANFRLHMRIHTGEKPFQCATCPYSTGNKGNFRKHMRKHTGEKPYKCTLCKFKRYRCVTCAYQTDRREHYKRHLMTHTGECPYKCKFCSYGTIHRWLLLSHVRNKHTGEARYRCDSCDYRCDTLYHLNRHSVVHKSLPVDGYPVDFSVQYDLAGLNPPKTAGECLRVKTELFRSIESDPILRKLIFGPSMSITIKQRPTKPSVAIDEEDSESKRQQHLKRKRLKENIDLGEGHNAGEFSEAIECEICENTFKDNLEFGLHSIKHSANQKFSCHMCKYSSASKYHFEMHVRAHEGTTKYKCEICNKAFTVSTHAIEHKYFHTGEKPFQCEICGKHFMFSWFLSSHRRSQHWEIMTGMPLVKYDCLICNKHYTSSTGLKRHKISKHNDGCAETSVLCDICGKRLASKEKLKFHRRIHTGYKPYSCEFCSKCFSRKEQLKEHERIHTGEKPYICKFCGKGFTQRSPLRIHERTHTGERPYVCRLCNKGYISKGVMDTHMKNCQGLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00466608;
90% Identity: iTF_00466608;
80% Identity: -