Basic Information

Insect: Dorcus hopei
Gene Symbol: -
Assembly: GCA_033060865.1
Location: CM065425.1:69758639-69777647[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 9e-06 0.001 20.9 0.7 1 23 14 36 14 36 0.98

2 33 0.00021 0.024 16.6 4.6 1 23 42 64 42 64 0.97

3 33 0.25 28 6.9 0.8 1 21 70 90 70 91 0.92

4 33 3.7e-05 0.0041 19.0 2.1 1 23 95 117 95 117 0.98

5 33 0.017 1.9 10.6 4.1 1 23 123 145 123 145 0.97

6 33 0.0016 0.18 13.8 2.8 1 23 151 173 151 173 0.97

7 33 0.72 80 5.5 0.4 1 21 179 199 179 200 0.90

8 33 5e-05 0.0055 18.6 1.5 1 23 204 226 204 226 0.98

9 33 0.021 2.4 10.3 4.2 1 23 232 254 232 254 0.97

10 33 7.2e-06 0.0008 21.2 0.5 1 23 260 283 260 283 0.96

11 33 0.062 6.9 8.8 6.5 1 23 335 357 335 357 0.99

12 33 0.0001 0.011 17.6 3.0 1 23 362 384 362 384 0.99

13 33 0.00017 0.019 16.9 3.5 1 23 390 412 390 412 0.98

14 33 0.00024 0.027 16.4 0.6 1 23 418 440 418 440 0.99

15 33 0.0043 0.48 12.5 2.6 1 23 446 468 446 468 0.97

16 33 0.18 20 7.3 3.6 1 23 474 496 474 496 0.97

17 33 0.0033 0.37 12.8 3.5 1 23 502 524 502 524 0.97

18 33 3e-06 0.00033 22.4 1.7 1 23 529 551 529 551 0.99

19 33 0.00023 0.025 16.5 3.0 1 23 603 625 603 625 0.98

20 33 0.00018 0.02 16.8 0.8 2 23 632 653 631 653 0.97

21 33 0.00016 0.018 16.9 5.0 1 23 659 681 659 681 0.98

22 33 0.00025 0.028 16.3 4.5 1 23 687 709 687 709 0.98

23 33 4.5e-06 0.0005 21.9 4.6 1 23 715 737 715 737 0.99

24 33 0.2 22 7.2 6.9 1 23 743 765 743 765 0.94

25 33 0.041 4.5 9.4 0.2 1 23 771 793 771 793 0.98

26 33 0.041 4.6 9.4 2.7 1 23 799 821 799 821 0.98

27 33 0.044 4.9 9.3 6.8 1 23 827 849 827 850 0.95

28 33 0.017 1.9 10.6 2.9 1 23 855 877 855 877 0.98

29 33 0.0061 0.68 12.0 4.9 1 23 929 951 929 951 0.98

30 33 0.00032 0.035 16.0 0.7 2 23 958 979 957 979 0.97

31 33 0.0028 0.31 13.0 1.9 1 23 985 1007 985 1007 0.98

32 33 0.0078 0.87 11.7 4.5 1 23 1013 1035 1013 1035 0.98

33 33 6.2e-06 0.00068 21.4 3.6 1 23 1041 1063 1041 1063 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	9e-06	0.001	20.9	0.7	1	23	14	36	14	36	0.98
2	33	0.00021	0.024	16.6	4.6	1	23	42	64	42	64	0.97
3	33	0.25	28	6.9	0.8	1	21	70	90	70	91	0.92
4	33	3.7e-05	0.0041	19.0	2.1	1	23	95	117	95	117	0.98
5	33	0.017	1.9	10.6	4.1	1	23	123	145	123	145	0.97
6	33	0.0016	0.18	13.8	2.8	1	23	151	173	151	173	0.97
7	33	0.72	80	5.5	0.4	1	21	179	199	179	200	0.90
8	33	5e-05	0.0055	18.6	1.5	1	23	204	226	204	226	0.98
9	33	0.021	2.4	10.3	4.2	1	23	232	254	232	254	0.97
10	33	7.2e-06	0.0008	21.2	0.5	1	23	260	283	260	283	0.96
11	33	0.062	6.9	8.8	6.5	1	23	335	357	335	357	0.99
12	33	0.0001	0.011	17.6	3.0	1	23	362	384	362	384	0.99
13	33	0.00017	0.019	16.9	3.5	1	23	390	412	390	412	0.98
14	33	0.00024	0.027	16.4	0.6	1	23	418	440	418	440	0.99
15	33	0.0043	0.48	12.5	2.6	1	23	446	468	446	468	0.97
16	33	0.18	20	7.3	3.6	1	23	474	496	474	496	0.97
17	33	0.0033	0.37	12.8	3.5	1	23	502	524	502	524	0.97
18	33	3e-06	0.00033	22.4	1.7	1	23	529	551	529	551	0.99
19	33	0.00023	0.025	16.5	3.0	1	23	603	625	603	625	0.98
20	33	0.00018	0.02	16.8	0.8	2	23	632	653	631	653	0.97
21	33	0.00016	0.018	16.9	5.0	1	23	659	681	659	681	0.98
22	33	0.00025	0.028	16.3	4.5	1	23	687	709	687	709	0.98
23	33	4.5e-06	0.0005	21.9	4.6	1	23	715	737	715	737	0.99
24	33	0.2	22	7.2	6.9	1	23	743	765	743	765	0.94
25	33	0.041	4.5	9.4	0.2	1	23	771	793	771	793	0.98
26	33	0.041	4.6	9.4	2.7	1	23	799	821	799	821	0.98
27	33	0.044	4.9	9.3	6.8	1	23	827	849	827	850	0.95
28	33	0.017	1.9	10.6	2.9	1	23	855	877	855	877	0.98
29	33	0.0061	0.68	12.0	4.9	1	23	929	951	929	951	0.98
30	33	0.00032	0.035	16.0	0.7	2	23	958	979	957	979	0.97
31	33	0.0028	0.31	13.0	1.9	1	23	985	1007	985	1007	0.98
32	33	0.0078	0.87	11.7	4.5	1	23	1013	1035	1013	1035	0.98
33	33	6.2e-06	0.00068	21.4	3.6	1	23	1041	1063	1041	1063	0.98

Sequence Information

Coding Sequence: ATGAAGACACACAAATTAGGACATACCAACGAGAGGCCCTTCACTTGTGAAATTTGCGATCGTAATTTCAGAGAACTTGGAACCTTGAAACGGCACTTGTTAACGCACAACAAAGGGGAGCGCTTCACTTGTGAATTTTGCGATTGTAATTACAGACAACGTAAAAActtgaaacggcacatgttaGCGCACAACAAAGAGAAGCCCTTCACTTGTAAAACTTGCGATCGTAAATCCAAACGGCTCGCAATCTTGAAACAGCACACGTTAACGCAGAAGCCCTTCACGTGTAAAACTTGCGAGCGTGGATTCACACAAATGAGAGACTTGAAACGCCATTTGTtaacacacaccgacgagaaacctttcagttgcgatctttgcgattacaggtGTCGACGATCCGAAAGTATGAAGGAACACAAATTAAGACATACCAACGAGAAGCCCTTCGCTTGTGAAAATTGCGATTGTAAGTTTAGAGGACTTAAAACCTTGAAACGACACGTGTTAACGCACAACAAAGAGAAGCCCTTCACTTGTAAAACTTGCGATCGTAAATCCGAACGGCTCGCAATCTTGAAACAGCACACGTTAACGCAGAAGCCCTTCACTTGTAAAACTTGCGAGCGAGGATTCACACAAATGAAAGACTTGAAACGCCATTTattaatacacaccgacgagaaacctttcagttgcgatctttgcgattacaagtgtcgaCGATCCGAAAGTATGAAGGAACACAAACTAAGACATACCAACGAGAAGCCCTTCACGTGTGAAATTTGCGGTCGTGGATTCACACGAATGGGAACATTGAAACGCCACTTGTTAAACACACACAGTGCAGTTGAGGGTGTCAACAAGAGGCGTATTACTCAGAACGACTTGGCGAAAATTTTTGGTAAACGTTGCTTCGTTGTCTTGACCCGCTGCGCGTCGCTGCCAACTAAAAGTAAACAGCCGCGACTTCGCAAGTGTGCAAACGCAAACCTGTACAGGTGCGATCTTTGCCGTTACAGGTGTAAAAAACTCAAAACGTTAGAAACCCACACGAGAAAACACACCGAGAGACCTTTCAAATGTAACATCTGTGATTTCAGATTTACAAgcatacaatttttaaaaaggcacgttaAGACGCACACCGATGAAAAACCGTTCGTGTGCGAGCAATGCGATTACAAGTGCAGATCGCGTTCTAATTTACTTCAGCACTTGACGACACACAGTGACGAGAGGCCTTTCCGATGTGAAATATGTGATTCTAGATTTACAAGTGTATATGTCTTAAAAATACACATTAAGACGCACACCGATGAAAAGCCGTTCGCGTGCGAGAAAtgcgattacaaatgcagaTTGCGTCCTAATTTACTTCGCCACTTAACGACGCACAACGAAGAGAAACCTTTCAGATGTGACGCATGTGATTTTAGGTGTAAAACCTTACAAAGTTTGAAATTGCACGTTACGAAGCACACCGATGAAAAACCGTTCGAGTGCAGGAAGTGCCCTTGTAGATTCAAATCGCGTCAGAGTTTGTGGCGGCACTCACTGGTACATAATGAGGTGGTGTACAGATGTAGCGTATGTGATTTCGGATTTAAAACTTCGCAAACTTTAAGACGTCACATGATAACGCACACGGACGAGAAACCGCTTACGTGTGCGAAgAGGCGCATGACTCAGAATGACTTGGAGAATATTTTTCGCAAACGTTGCGTCGTCGTTTTGACTCGCTGTGTGCCACTCGAAAAAAAGCAGCCGGGCTATCGCGACTACGATCCCAAAAAGCGGTTCAGATGCAACATTTGCGACTACAAGTGTAGGACCCCTAGAATGTTGAAAATACACGTAATGAAACATACCGGCGAAAACTCCGTCAAGTGTAGCATATGTGATTTTAAAAGTAGATatcaagaaaatttgaaaacccACATGCTGATACACACCGATGAGAAACCGTTTAAGTGTAGCAAGTGCGATTACAGGAGCAGACGTAAGAACAATTTCCGTCGACACTTGAAGATACACAACGACGAGAAGCCTTTCAAATGTAACATATGCGATTTTAGGTGCAAAACTTTGCAAAACTTGAAAAGTCACATCTTGAAGCACACCGATGAAAGGCGGTTTAAGTGTAACAAGTGCGGTTTCACGTTCAGAGAGCGTGGACATTTGCGGCGACACTTGATGACGCACAATAACGAAAAGCCTTTCAGTTGTAAAACGTGTGATTTTAGATGTAGAAGCGCGcagcatttaaaaaatcacaatgTGAAGCACACCAATGAAAAGCCGTTTAGTTGCAACAAGTGCGCTTACAGGGGCGGAAGGCCTGGGGATTTACGTCTACACTTAACGACACACGACGATGAGAAACCTTTCAAATGTGACATttgtaattttgaatgcaaGAGATCGCAAATTTTAAGGGAACATCTTTTGACGCACACCGATGAGAAAACATTTAAGTGTGGCAAATGCGATTTCAGGAGCAGACAGCCTTCGACTTTACACAAACACTTTAAGCTTCATCACGTCAAGCAGCCGTTCAGATGTAACGTGTGTGATTTTAGATGTGGACTTTCACGTACTTTGACAAGACATGTGTTGACACATAGCGAGGAACAAAAGTTCAAGTGTAACAAGAAGCGCATGACTCAGAATGACTTGgagaatatttttcgtaaacgttGCGTCATCGTCTTGACTCGCTGTGTGCCACTCAAGAAAAAGCAGCCGGACTATCGCGACTGCGATCCCGAAAAGCGGTTCAGATGCAACACTTGCGACTACAAGTGTAAGACCCCTAGAATGTTTAAAATTCACGTAATGAAACACACCGGCGAAAACCCCGTCAAGTGTAACGTATGTGATTTTAAAAGTAGATCTCAAGGAAGTTTGAAAACCCACATGCTGATACACACCGATGAGAAACCGTTTAAGTGCAGCAAGTGCGAGTACAGGGGCAGACTTAAGATCAATTTACGTCGACACTTGAAGATACACAATGACGAAAAGCCTTTCAGATGTAACATATGCGAGTTTAAGTGCAAGACTTTAGAAAGCTTGAAAAGTCATACCTTGAGGCACACCGATGAAAGGCCATTTAAGTGTAACAAGTGCGGTTTCACGTTCAGAGAGCGCGCACATTTGCGGCGACACTTGATGATACACAATAACGAAACCCTTTCAGTTGTAAAACATGCGATTTTAGATGTAGAAGTTCGCAACACTTAA
Protein Sequence: MKTHKLGHTNERPFTCEICDRNFRELGTLKRHLLTHNKGERFTCEFCDCNYRQRKNLKRHMLAHNKEKPFTCKTCDRKSKRLAILKQHTLTQKPFTCKTCERGFTQMRDLKRHLLTHTDEKPFSCDLCDYRCRRSESMKEHKLRHTNEKPFACENCDCKFRGLKTLKRHVLTHNKEKPFTCKTCDRKSERLAILKQHTLTQKPFTCKTCERGFTQMKDLKRHLLIHTDEKPFSCDLCDYKCRRSESMKEHKLRHTNEKPFTCEICGRGFTRMGTLKRHLLNTHSAVEGVNKRRITQNDLAKIFGKRCFVVLTRCASLPTKSKQPRLRKCANANLYRCDLCRYRCKKLKTLETHTRKHTERPFKCNICDFRFTSIQFLKRHVKTHTDEKPFVCEQCDYKCRSRSNLLQHLTTHSDERPFRCEICDSRFTSVYVLKIHIKTHTDEKPFACEKCDYKCRLRPNLLRHLTTHNEEKPFRCDACDFRCKTLQSLKLHVTKHTDEKPFECRKCPCRFKSRQSLWRHSLVHNEVVYRCSVCDFGFKTSQTLRRHMITHTDEKPLTCAKRRMTQNDLENIFRKRCVVVLTRCVPLEKKQPGYRDYDPKKRFRCNICDYKCRTPRMLKIHVMKHTGENSVKCSICDFKSRYQENLKTHMLIHTDEKPFKCSKCDYRSRRKNNFRRHLKIHNDEKPFKCNICDFRCKTLQNLKSHILKHTDERRFKCNKCGFTFRERGHLRRHLMTHNNEKPFSCKTCDFRCRSAQHLKNHNVKHTNEKPFSCNKCAYRGGRPGDLRLHLTTHDDEKPFKCDICNFECKRSQILREHLLTHTDEKTFKCGKCDFRSRQPSTLHKHFKLHHVKQPFRCNVCDFRCGLSRTLTRHVLTHSEEQKFKCNKKRMTQNDLENIFRKRCVIVLTRCVPLKKKQPDYRDCDPEKRFRCNTCDYKCKTPRMFKIHVMKHTGENPVKCNVCDFKSRSQGSLKTHMLIHTDEKPFKCSKCEYRGRLKINLRRHLKIHNDEKPFRCNICEFKCKTLESLKSHTLRHTDERPFKCNKCGFTFRERAHLRRHLMIHNNETLSVVKHAILDVEVRNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465625;
90% Identity: iTF_00465625;
80% Identity: iTF_00465625;