Dhop018070.1
Basic Information
- Insect
- Dorcus hopei
- Gene Symbol
- Su(H)
- Assembly
- GCA_033060865.1
- Location
- CM065422.1:9486397-9493151[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.52 1.4e+04 -2.4 0.0 72 99 108 136 98 155 0.56 2 3 1.3 3.5e+04 -3.7 0.0 24 44 184 204 176 208 0.43 3 3 2.3e-31 6.1e-27 95.7 0.0 1 63 222 284 222 307 0.90
Sequence Information
- Coding Sequence
- atGCCACATCAGTACGGCCTACCGGGAATAGCACACGCACAGTCACCCCCGACTCCTCCACCACAGCATGGTGCAATGTACCCCAGGTTTTCCGGAGCCGTGGTCCCCGGCGGTTATCGAGGAGAAGATCGTAGGCTCACGCGAGAAGCTATGGAAAGGTATCTACGTGATAGGTCTGATATGGTCATCGTGATACTCCATGCTAAAGTTGCTCAAAAATCTTACGGTAATGAAAAACGTTTCTTCTGCCCTCCACCTTGTATATACCTATTCGGAGATGGCTGGAGATTGAGACAAGAACAGATGTTACGTGAGGGTGAATCCGAGCAGGCCAGTCAACTTTGTGCATTTATAGGAATAGGAAACTCAGACCAGGACATGCAACAGCTCGATCTGAACAACGGCAAACAGTACTGTGCCGCCAAGACCTTGTACATTTCAGACTCTGATAAGCGCAAACACTTCATGTTATCTGTGAAAATGTTTTACGGCTCAGGCCATGACATCGGGGTGTTTCACAGTAAGCGAATAAAAGTTATCTCGAAGCCGTCGAAGAAGAAACAGTCGCTGAAGAACGCGGACTTGTGCATAGCGAGCGGGACGAAAGTCGCTTTGTTTAATCGGTTGCGCTCTCAGACCGTTTCCACCAGGTACCTGCACGTGGAAAACGGGCATTTTCATGCGAGTTCGACGCAGTGGGGCGCATTCACGATACACCTGCTGGATGATAATGAGTCGGAGAGCGAGGAGTTTCAGGTTCGAGATGGGTACATCCACTACGGGTCGACCGTGAAGTTGGTGTGCTCGGTTACAGGCATGGCACTTCCCAGACTTATCATCAGAAAAATTTTAAGCGAGTATAATTGCATTTTAATCGAAAATATGTCAGTGGAAGTAGTGATCTATCTGCAACATCAAACGCTCGCGAAATCAACGTTGTGCTCCTAA
- Protein Sequence
- MPHQYGLPGIAHAQSPPTPPPQHGAMYPRFSGAVVPGGYRGEDRRLTREAMERYLRDRSDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRQEQMLREGESEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFHSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGHFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGSTVKLVCSVTGMALPRLIIRKILSEYNCILIENMSVEVVIYLQHQTLAKSTLCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086067;
- 90% Identity
- iTF_01257740;
- 80% Identity
- -