Basic Information

Insect: Dolichoris vasculosae
Gene Symbol: -
Assembly: GCA_018907195.1
Location: JACCHY010000001.1:5262407-5266632[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.065 16 7.6 0.6 1 23 622 644 622 644 0.81

2 16 1.8 4.5e+02 3.0 1.5 1 19 650 668 650 671 0.90

3 16 0.48 1.2e+02 4.9 1.1 1 23 676 698 676 698 0.94

4 16 0.00099 0.24 13.3 1.6 3 23 707 728 706 728 0.97

5 16 0.0044 1.1 11.3 2.8 1 23 735 758 735 758 0.96

6 16 0.00034 0.082 14.8 1.2 1 23 764 787 764 787 0.94

7 16 1.7e-07 4.2e-05 25.1 1.8 2 23 821 842 820 842 0.97

8 16 3.4e-06 0.00084 21.0 0.2 1 23 848 870 848 870 0.99

9 16 0.00084 0.2 13.5 2.8 2 23 882 904 881 904 0.95

10 16 0.02 4.9 9.2 2.3 1 23 910 933 910 933 0.95

11 16 0.049 12 8.0 2.5 2 23 955 977 954 977 0.93

12 16 0.0069 1.7 10.7 0.3 2 23 984 1006 983 1006 0.96

13 16 4.5e-05 0.011 17.5 1.0 3 23 1015 1035 1013 1035 0.96

14 16 0.0098 2.4 10.2 2.4 1 23 1041 1064 1041 1064 0.94

15 16 0.3 73 5.5 4.3 2 23 1071 1092 1070 1092 0.96

16 16 0.0043 1.1 11.3 2.8 1 23 1098 1120 1098 1120 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.065	16	7.6	0.6	1	23	622	644	622	644	0.81
2	16	1.8	4.5e+02	3.0	1.5	1	19	650	668	650	671	0.90
3	16	0.48	1.2e+02	4.9	1.1	1	23	676	698	676	698	0.94
4	16	0.00099	0.24	13.3	1.6	3	23	707	728	706	728	0.97
5	16	0.0044	1.1	11.3	2.8	1	23	735	758	735	758	0.96
6	16	0.00034	0.082	14.8	1.2	1	23	764	787	764	787	0.94
7	16	1.7e-07	4.2e-05	25.1	1.8	2	23	821	842	820	842	0.97
8	16	3.4e-06	0.00084	21.0	0.2	1	23	848	870	848	870	0.99
9	16	0.00084	0.2	13.5	2.8	2	23	882	904	881	904	0.95
10	16	0.02	4.9	9.2	2.3	1	23	910	933	910	933	0.95
11	16	0.049	12	8.0	2.5	2	23	955	977	954	977	0.93
12	16	0.0069	1.7	10.7	0.3	2	23	984	1006	983	1006	0.96
13	16	4.5e-05	0.011	17.5	1.0	3	23	1015	1035	1013	1035	0.96
14	16	0.0098	2.4	10.2	2.4	1	23	1041	1064	1041	1064	0.94
15	16	0.3	73	5.5	4.3	2	23	1071	1092	1070	1092	0.96
16	16	0.0043	1.1	11.3	2.8	1	23	1098	1120	1098	1120	0.98

Sequence Information

Coding Sequence: ATGAAGAACAAATTGTTAGACAACGAGGATCATAATTACAGCGACCCCCATTTAATAAAAACAGAAACTATTGAAAATATTGCAAATGCTAATTTTAAAAGTAATATTATATACTCTAAAGTGTCTCATGGAGGAAAAGATAAATATATTGGGTTAAAAATAACAAATATAAATGATCTTAAAAGGGCAACTCCTCGTCTTAAATTACCAGCAATATTATCTTCAACGGCTATTAAGAAGTCTCCTCCGGTACCTGATGAAATTAAAGAAAAATTGTATAAATACTGCCGTACTTGCGCAGGACTAAAAGTTCCATTAGTTGATATATTTAGTGAAAAAGGAATTCAAATGAGACTAAGTCAACAAATACAACATCTAGAAGATATCAATAAGCATGATAGCTTATCAACTCAAATGTGTATGGATTGTATTTGTGATTTAAAAATGAGTTATAAATTTTTCATGCAAATTAAAAAAGCTGAAATGAAATTAAAATCAATTTGTAATGCATTAAATGATTCTATATTTAAACCAATTAATACAAATATTGAAAATCAAACTGTAGATAAAAATGATTCTAAGCCTTTAAGCGAGGAATCAATAACAAAAGATAATGATTTTGAAAGTAAAGAATTAAAACCTGAATTAAGTGACTATTCTTTTTGTGCAGTGAACGAAGGATGTAACGATGAAAATGAATCCATTGAAGAATTCGATCCAGATAATCCATATGATTTGAATGAAAACGAAGCAAATAAAAGCGCTGAATCCGAAAATTGTAATATTGAGCTTCTAGACGAGAATAAAACAACTGCTTACAGATACGATGAATCATTAAGCGCATATGTTAAAATTGAAGGTGTCGAAGAAAATGAAACAAACAATGAACAAAAAATGAAACCTGAAACTAATACTATTAATATCGAGTCTCTAGTTTCTGGATCTTTAAATCAGTCTTTAAAGATGCCTAATATATTAAAAAGAAAACTACCCATTAACAATGGAGGCGAAGAGAGCGTCGATAATATCAATAAAATAAATTTTCAAAAATTAAGTATTGGGTTAAAAGATTTAAAAATTCCCAAACTGAATCTTCAAGATACTGTGAACATAAAAACAGAAGAAAATGGTGTAATGTACGTTACTGCTAAAGGATCAAAACCAAACGAAATGCTATTAATAAAAGTCAAAAAAATGGGAAAATTGATGGATAAGAAAGGAGAAAAATCGCATAGTAAAAAGAAATCTGATCCTTGCGTGGTGCATAAGATATTCCCAAAATATGATACTCATAGCGAAAAGGGAAGTTACATCGATGAACAAATTGAGCAGTATAAGAAAAGAAGGGTAGAAGTCTTGGGACAAAATGCCAATATGTTAGAAAGTAGTATCGAAAAGAAGAATTCGCAAAATTCAATTGTAATTAAGGATCACTCAGCTGACATAGAAATTCTCGATTCGGAAGAACACTTGCAAAATGAAGAAGCGGACGACAACAAGAAGGAAGAAGGTGATATTTCGCAAGTGATCAAAGACATGCCTGCCATTGCACCACAATATGTATCGCGCCTGGAAAAATTGAAGCAGCGATGGAAAGACATCAAGAAAAGACACGACGCGATCAATAAAGATCTAGCAGAAGATTGTACTGATAGATTAAGGACTATTCTGAGACAAAAGGATGAATATTTATTAGACTTTGTTAATTATTTAAAGCAACGTAGAATCGTAGCCTCACGCTTAAAAGATGAAGACATCATTTCGTTGTACGAAGTAAAAAATAACGTTGTTTTAGAAAGATTACCAACGATAGCGGTAAACGAATACGACGAGAATGTCGATCCTTTTGAATACAGAGAAAGTTTTCAATGTGACTTTTGCAATCAATCTTTTCCAAACAGAGATATGGAATACGAGCATGCGAAAATCCACGATTTCAAGTTGATGCATTACTGCGAGGATTGTAAAAATGAATTTCCCACGCATAAGGCAAAACGTGCTCATAGCATTAAGTGTGTACAAAAATTTTTGTGCAATTATTGTGATATGATTTTAGAATCTAAAGGAAAGAAACGACAGCACGAACAAAAACATTGTGATGAACAGAACGGTCAACTTTGCGATTTATGTGGTGAAAAGTTCAAGCATCAAGGAACTTTGGATCAACATGTAAAGTCTCGACATATGCAACTGGAAAAGATTTACAAATGCCCGCAATGCACGAAAAGATTTGCATTCAGAACAAAATTAACCTTCCACTTAAAATCTGTACATACTACTAGTCGAGCTTTTTTGTGCGAGGATTGTGGCTCCGATTTTAAAAATCCTGCAAGTCTGAGACACCATAGAATTCGAAAGCATCAGTCGGTAAATAATAAAAAAGAATGTAACATCTGTCACAAGTTGGTTCCAGTTTACAGTATGTCAAAACACATGCATACGCATAAAGCCTACACCATCGAATGTCCTCATTGCGATAAAATGTTCAAGAATACTTCTACCCTGAAGCAGCATATAAGAATCCACGAAGATCAACGACAGTACAAATGTGACATGTGCGGCGTTGGTTTCAACCGACGAGATGGCTTGAGGTTACATTTGAGAGTTCACGAGAAAACCGACAGCAGAGGCTTAAAAGAATGTTCGTGCCAAGTTTGCGGGGAGAAGTTTCCGAATCATTCGATGCTCGTGATTCATAGGAATCGCACTCACAAGGATGGCAGAAATTACACTTGTCATATATGCAACAGGTCCATGATATCAACTCGGTCGCTCGAGTGGCACTTGTCGCACATACACAATGAAAGAATGCCAGGTATCGTTAAAGACGACTCGACCATAGACGCCGAAACCAAGCGAGTTTCTTGTTATCACTGCGAGAAAACGTTTAAAACCGAGATGATATTGCGAACACATGTAAAAAATACGCATGTACAAAAGGAGCCTGTAAAATGCTTGGACTGCGATTTATTGTTTGTATCCGAGGTACGCTTGAAACACCATATGATGGTAATTCACAATCGCCTGGAAGGAACTTTAGCTTGTCCGCATTGTCCTAAAAGATTCGTCAATCAGTTGCGATTGAAAACTCATATGATTTCTCACTCGGATGAGCGACCGCATAGCTGTGACCTTTGCGGTTTCATGTTGAAGACGAAAATACAGCTGATCAAACACAAGCAAAACAGACACAGCAACGAAAGACCACTTCAATGCAAATATTGTTCATGGAGATGTAAGCAAGTCAGTGCATTGGTTTGTCACGAAAGAACTCACACGAACGAAAGACCTTACAGTTGCAGCGTATGTAAGCAAAAATTCAAATATTTGGGAGACAAAAACAAACACGAGAGACGACACGAGAGCCTCGGTGGTTCTGGATTTAAGAGGATCGTTACTGGAAGGAATACCAACAGAATTAACCGAAAGAAGGAGGAGGATTCACCCGATCAAGATTCCGAGCAAGAGCAAGAGGAGTATGAAATGGATCAGGAAGGGGACGACGATTACGAAGACCAGGAAGATAATATTAAAGTAGAAGAGCAAACCTTCGATGAGTCGCAAATTGTAAAATTCGAAACTGGAGAAATCATAACTGAAGAATCACAGGCATCCTTTGAAAGGATGTACGTTGAAGACACGTCTCAAGATACGAACGATGCAAACGAAGTTGTCATGGGTATGGAAGAAACAACGGTTTATACGGAAGAAGTTACAGCTGATCATATCGAGCCCGAAATAATCACCAATGATATTATAGATGAATCTATGTTGCAACCAGGAACTGTTGTTCATTTGCAACAAGAAGATGAAACTGGCAAGATCCAGGTGATACCAGTTATGTTATCTTTGCCAGATTTATCAGATGCCACGTCTGAAGTTAGTTTAGCAACAGCTTCTATAATGTACAATAACTAA
Protein Sequence: MKNKLLDNEDHNYSDPHLIKTETIENIANANFKSNIIYSKVSHGGKDKYIGLKITNINDLKRATPRLKLPAILSSTAIKKSPPVPDEIKEKLYKYCRTCAGLKVPLVDIFSEKGIQMRLSQQIQHLEDINKHDSLSTQMCMDCICDLKMSYKFFMQIKKAEMKLKSICNALNDSIFKPINTNIENQTVDKNDSKPLSEESITKDNDFESKELKPELSDYSFCAVNEGCNDENESIEEFDPDNPYDLNENEANKSAESENCNIELLDENKTTAYRYDESLSAYVKIEGVEENETNNEQKMKPETNTINIESLVSGSLNQSLKMPNILKRKLPINNGGEESVDNINKINFQKLSIGLKDLKIPKLNLQDTVNIKTEENGVMYVTAKGSKPNEMLLIKVKKMGKLMDKKGEKSHSKKKSDPCVVHKIFPKYDTHSEKGSYIDEQIEQYKKRRVEVLGQNANMLESSIEKKNSQNSIVIKDHSADIEILDSEEHLQNEEADDNKKEEGDISQVIKDMPAIAPQYVSRLEKLKQRWKDIKKRHDAINKDLAEDCTDRLRTILRQKDEYLLDFVNYLKQRRIVASRLKDEDIISLYEVKNNVVLERLPTIAVNEYDENVDPFEYRESFQCDFCNQSFPNRDMEYEHAKIHDFKLMHYCEDCKNEFPTHKAKRAHSIKCVQKFLCNYCDMILESKGKKRQHEQKHCDEQNGQLCDLCGEKFKHQGTLDQHVKSRHMQLEKIYKCPQCTKRFAFRTKLTFHLKSVHTTSRAFLCEDCGSDFKNPASLRHHRIRKHQSVNNKKECNICHKLVPVYSMSKHMHTHKAYTIECPHCDKMFKNTSTLKQHIRIHEDQRQYKCDMCGVGFNRRDGLRLHLRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRTHKDGRNYTCHICNRSMISTRSLEWHLSHIHNERMPGIVKDDSTIDAETKRVSCYHCEKTFKTEMILRTHVKNTHVQKEPVKCLDCDLLFVSEVRLKHHMMVIHNRLEGTLACPHCPKRFVNQLRLKTHMISHSDERPHSCDLCGFMLKTKIQLIKHKQNRHSNERPLQCKYCSWRCKQVSALVCHERTHTNERPYSCSVCKQKFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNRINRKKEEDSPDQDSEQEQEEYEMDQEGDDDYEDQEDNIKVEEQTFDESQIVKFETGEIITEESQASFERMYVEDTSQDTNDANEVVMGMEETTVYTEEVTADHIEPEIITNDIIDESMLQPGTVVHLQQEDETGKIQVIPVMLSLPDLSDATSEVSLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01216982;
90% Identity: -
80% Identity: -