Basic Information

Gene Symbol
ZFX_1
Assembly
GCA_018907195.1
Location
JACCHY010000028.1:2229231-2235609[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.6 3.9e+02 3.2 0.1 3 23 29 49 28 49 0.94
2 15 2.9 7.1e+02 2.4 3.3 1 20 997 1016 997 1020 0.76
3 15 0.0015 0.36 12.8 2.4 1 23 1102 1125 1102 1125 0.97
4 15 0.003 0.74 11.8 0.3 2 23 1138 1159 1138 1159 0.98
5 15 1.7e-05 0.0042 18.9 2.3 2 23 1162 1183 1161 1183 0.97
6 15 0.045 11 8.1 0.4 1 23 1189 1211 1189 1211 0.91
7 15 2.4e-05 0.0058 18.4 4.5 2 23 1218 1239 1217 1240 0.95
8 15 0.1 26 6.9 3.7 5 23 1253 1271 1252 1271 0.97
9 15 2.1e-05 0.0052 18.6 1.5 3 23 1278 1299 1277 1299 0.97
10 15 0.0097 2.4 10.2 0.3 2 23 1315 1335 1314 1335 0.97
11 15 6.4e-05 0.016 17.0 0.7 1 20 1341 1360 1341 1363 0.92
12 15 8e-05 0.02 16.7 2.7 1 23 1371 1393 1371 1393 0.99
13 15 0.0022 0.55 12.2 3.2 1 23 1399 1421 1399 1421 0.97
14 15 4e-06 0.00099 20.8 3.9 1 23 1427 1449 1427 1449 0.99
15 15 0.00029 0.071 15.0 7.2 1 23 1455 1477 1455 1478 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCACAGCTGTAACTACAATGTCAGCGGGAGCAGCTAATGTTGCCGGCGGAGGCAGTAACGGTGGAGCAGTGGCCTGTCCAGTTTGCACATTGTATCTGCGTGAGGGCATCAGCTTACAAAAGCATTTGGACACACATCCCAAGGAGCAGGTTATTGAAGCACTCATAAGAGCTAGCAGTAGTAGCAGCAGTGCCTCTGTTCTCCTCAGTCAAGCCTGTATGCCACAGTCACAACAGTCTCAGGCATCAGTATCGGTCACATCCCAACCTTCAACGCTTGCATCTGCACCTACACCGACGCCGAGCTCAATTGCAGGTGTTCAACAGCAATCGGCCTCATCGACAAGTCCACATGTTCCTCACACTCAATCTCCATACCCAATTGGACCTATATTCGAGTGTCCACCGATCAATGCCATGATACCCCCACCTCAGTTTGCTTCTTTTAGCTATCAACAATTTATCAATAATGGTACAATGATGATACCTGCACAATATGCAATGGCTCAAGCGCAACCTCAAACCAGTCAGATGATGCAGATGTTATATAGCCCTTATGGTATGTATCATCAACAACAAATTCCCACAGTTCAGATGATCTCAACACCACCAATGATGCCCACTTCGTCAACGACGTTACCAACAACTGTGCCTGCAGTCACGACGCGTATGAGGCCTACTTCTAGCACGAGCAATGTTACGCTCACAGCAGTCAATGAAAAGATAACGACAACGACGTCACCACCGGCACCACTTTCTCCGTCTTCGCCACTGAGAACAACGATTTTCTCACAGCAACAACTAGTGGTTGAGACATCTAAACAACACTTAGTTCAAGAGATTGTACCTGGGCCTGATCGTATACTACCCGATTTAGAAATTCCATCAATGCCCGAACCATCGCAAGCTGATGATGACGATGAGCGGAACAGTGTGCACGAAGAGCATCGGGAGCATCAGATTCAGAATAATAGTATACAGGGGGAGGAACACCATATTATTGAACAATATCAAAGAGAAAATTCACCAATGTTGATCAGTAATTCTTGCGACAATAATACTGATGTTGATAAGACTGAAAGGATTTTACCAGAAATTGAAGATGATAAGGAAATTGAATTATTAATAGTGCGAGAAACAGAAAGGGTAGAGAATTATAAAGAAACAGAACTTATTGAACAAATCGAAAATTCAATTCATAAAGAAAATACAAAGAAAGAATTTATAGAAAATATTCATATAAATGAAGTAGATAATTGCAAACAGTTTGAAAATAAATCGGATGGTAGTACCCATGCCATGACAAAGAGTTTAGAACCTCATGATTTGTCAATCAATGAAACTCAGGTTTTAAGAATACATGCACCTGAAGTGGAGCAATTGAACAGGTTACTCATAAATATAGAATCGGAATTGAATAATGAAGAAAAAAATACCGACATATCACCGGAAAATATTTGTGAAAAATTGTCCATTGAAACAATCCAAAAACATCATGAGGAGGAGGAGAATACGAACATCTCATACCGTAAAAGCAGTCTAGAATCAATTGAGTGCAAAATTATTGTTACTCATGAGGACACAGATGTTTCATCCATCGCTTCTGAGGATTCAATGCAATGTGACTTAGAGATTCAAAAGATAATAACCTCCTCATATCATTATAAGTACTCCCAATCTACACCTTGTTTTTCCACTATCAAAAAGAAGTTCCATAGATCTTTATCAAGAGCTTCTTTACGTTCCGATTTCTATCGCTCTAATGAAAATGTTTGTCCTGTGGACTTTGAAGGTACCAAGCTACAAGACTATCTTAAAGATAATTACAATGATGAAGATATGGAACTGGAAGAATTGCAACATAACTCTTATATGAAGCAAAATACTGGCATTATCGTAGAGCGTACGAAATCACACACATCTTTGTCTACAAATATGAGTGGCGGTCTTTCCATAATAAAAGCACATCAAAGCAATGTACCTTCCTCACCACTATCCGTTCATAGTTCCTCATCATATTGTCGTATGGAAGAGGAGGAAGAAGAGGATGAGGAAGAGGAAGAGGAAGACGAAGAAGAGGAAGAAGACACGGATAGTGAAAGCTCTATTAGTTACCATACAAATGAAAAAGAAGATGATGAGAAATTAGAAGAAAATCGGCTTTTGCTGGATAAAAAAAAAAAGGAGAGTGAGAAAAAGGAGTTAATTCGTAAAGATTGTAAAGCTACAATAGCCTCCGAAATCATACAGTTGCAAGAACAATCTACAGATTTGAAATCTCAAAATTTAATATCTGATCTATACTCTGCTGGTCATTTTCCTTTAGATCACCGCTTGGGAACTCAGCAACAGCTACAATCTACCATGTCAATACACAATGAAGTTTATTCCATATCTGGTAATGAAATCTCGCAAAATCTTTTGAATATGACTGAGTGTGTAAATCCTACAACGAGTACAGATTCAAAAAGTTACTCTAGCTTAAGTAAATCACTAATGCAGAAACCAACAACAGAACTTCTAAACATCAATGAAGATGCCCACACAGGACCAATGAATGTCCTTGAATATGACGGATTACAAATTCTCGTACCAAGTACATTTATTAGTGAATCGTCACAGAAGGCCGTAAGTGGTACAAGTCAGCAATCAATTTCGAGTAGTGAGAATGGAGCAGGGAATGACGAAGAGGTTAAGAGTGTTAACATGCGAGCAGATGAAACAATGCCCCCAAGAGGTGAACTTTCAGAACAGGAGAGCAATGGTTGTACCGAACAATCAACCTGGCAGTCATATATGGGTCAAGACATGTCGACATCATATGACTTGATGGCACGCGAAAGTTGGGAAGAATCCGAGGGTTCTGAACACGAAGATAACAATGTCGGCCCCCTTCTCGACAGTCGTTCTCTTGCAACTCACTTCACCTCGAGCCTTTTTCTCGATCGCGACCGTAAGACGCCTCCTGGTCGGCGTATCTTTAAATGTTCGCACTGTACAGAGGTGTTCGAGTGTCCTAAGGAGCGGCGCGTGCACAGCACAATGGTACACAAGGAGGCTGGTCCTTCGGGTTGCGGTGCCGATAATACGGACCAACCGGAACTTAAGGATATTAAGTTGCTGGACGGCCGTGCAAGTGCGTTCGAAGACATGTTCACACCAAACACCCTGCACGCGTACCAAGTGCATCAGCAACCTCTGCTTCACCAACTCCAACCAGTTCAGCACTCAAGTTCCTCTAAGGTCGAAATAGATGCTAAACTAGATCCTCTTCACTTATCCGTAACGAACGAATTCATCTGTGCCCTCTGTAATCAACGTTTCAGCAGTGACAAATCTTTACAGATCCATCACAGACGTATGCACGTTGTTGAACCGGCGAAACGCGTCCGTGAAAACGCAAAGTGCCAAATTTGCAGTGAGGAATTCAGTTCAGTCGCAACTTTCAATTTACATTTGAAAGTACATCCGCTTGAGTGTGGTCAGTGTGGCAAATACTTCTATCGAAAACAGAATTTTAAGCTCCATATGAAACGTCATTTAGGAATAAAGCCCTTTCCCTGTACCGTTTGTGACAAAGCTTTTCTTACTAAGCAAAAGCTTGATGAGCACAACAATGGGCATACAGGCAATGCTCCTGTTAAGTGCAACCTGTGCAACGAGACTTTTAGGCGCTACTCAAATCTTACACAGCACAAGAATCGTCATCATCTGAATATTAAGAAGAAATTGAAGGACTATATATGCCATTGTGGTGAAGTTTTTCATACAAAAAAGAAACTTGCATGGCACAAGGAAACACACGATGAAAAGCCAAAGGCTTGTACTTACTGCAACGAGAGATTCATACACATGGCAAGTTTAACGCGACATATGCGGCGTGCCCACAATCGAAGATTCGTACCCGATGCTCAAAGAGATAGTGAAAACGTTGAATGTCCAATTTGCAAGTGCATTTATTTGAGATCCTCGTTGGCAGTGCACATGCGTGTACATAATGGGGAAAGGCCTTACGAGTGCCAAGTGTGCTCTAAAGCCTTCAGTACTAAGTGGAACTTGCAGCTCCATAAATGGACTCATGCCGCCCGAAGCACGAAGCCTTTTAAATGCAATCAATGCAGCGCAGCCTTTTACAGACACAGCGATTATACGGCGCATATGAATTCCCACAGGAACGTCAGACCATATACCTGCAATTACTGTGGAGCCCAATTCATTAGAAAGTACAACTGTCTCCGGCACGTTAAGGAACATGAAGAGAACAAGGCATACACGTGTGACGTGTGCAATAAAACGTTTCATAGATCATATTATCTAAAGGAGCATTTAAGAGTACACTCAGGAGCAAGACCTTATACATGCCATATATGTGGCAAATCTAGCAGCACAAAGTCCAATCATAATAAGCACGTTAGAATTCATCATGCGCGTGAGCCTGTAAATACGGAGAATTAA
Protein Sequence
MDLSTAVTTMSAGAANVAGGGSNGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSSSSSASVLLSQACMPQSQQSQASVSVTSQPSTLASAPTPTPSSIAGVQQQSASSTSPHVPHTQSPYPIGPIFECPPINAMIPPPQFASFSYQQFINNGTMMIPAQYAMAQAQPQTSQMMQMLYSPYGMYHQQQIPTVQMISTPPMMPTSSTTLPTTVPAVTTRMRPTSSTSNVTLTAVNEKITTTTSPPAPLSPSSPLRTTIFSQQQLVVETSKQHLVQEIVPGPDRILPDLEIPSMPEPSQADDDDERNSVHEEHREHQIQNNSIQGEEHHIIEQYQRENSPMLISNSCDNNTDVDKTERILPEIEDDKEIELLIVRETERVENYKETELIEQIENSIHKENTKKEFIENIHINEVDNCKQFENKSDGSTHAMTKSLEPHDLSINETQVLRIHAPEVEQLNRLLINIESELNNEEKNTDISPENICEKLSIETIQKHHEEEENTNISYRKSSLESIECKIIVTHEDTDVSSIASEDSMQCDLEIQKIITSSYHYKYSQSTPCFSTIKKKFHRSLSRASLRSDFYRSNENVCPVDFEGTKLQDYLKDNYNDEDMELEELQHNSYMKQNTGIIVERTKSHTSLSTNMSGGLSIIKAHQSNVPSSPLSVHSSSSYCRMEEEEEEDEEEEEEDEEEEEDTDSESSISYHTNEKEDDEKLEENRLLLDKKKKESEKKELIRKDCKATIASEIIQLQEQSTDLKSQNLISDLYSAGHFPLDHRLGTQQQLQSTMSIHNEVYSISGNEISQNLLNMTECVNPTTSTDSKSYSSLSKSLMQKPTTELLNINEDAHTGPMNVLEYDGLQILVPSTFISESSQKAVSGTSQQSISSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSTWQSYMGQDMSTSYDLMARESWEESEGSEHEDNNVGPLLDSRSLATHFTSSLFLDRDRKTPPGRRIFKCSHCTEVFECPKERRVHSTMVHKEAGPSGCGADNTDQPELKDIKLLDGRASAFEDMFTPNTLHAYQVHQQPLLHQLQPVQHSSSSKVEIDAKLDPLHLSVTNEFICALCNQRFSSDKSLQIHHRRMHVVEPAKRVRENAKCQICSEEFSSVATFNLHLKVHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHNNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRDSENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01219241;
90% Identity
-
80% Identity
-