Dvas025214.1
Basic Information
- Insect
- Dolichoris vasculosae
- Gene Symbol
- Zfx
- Assembly
- GCA_018907195.1
- Location
- JACCHY010000023.1:3391500-3396008[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00015 0.037 15.9 2.0 1 23 162 185 162 185 0.97 2 17 0.033 8 8.5 1.3 1 23 194 217 194 217 0.95 3 17 5.2 1.3e+03 1.6 3.2 1 21 223 243 223 244 0.87 4 17 0.0002 0.048 15.5 0.1 1 23 257 280 257 280 0.96 5 17 0.0098 2.4 10.2 4.8 3 23 295 315 294 315 0.96 6 17 1.5e-06 0.00037 22.2 1.2 1 23 335 357 335 357 0.97 7 17 0.00047 0.11 14.3 0.0 1 23 363 385 363 385 0.97 8 17 0.00032 0.079 14.8 0.2 1 23 391 414 391 414 0.97 9 17 0.022 5.4 9.0 5.9 3 23 561 582 559 582 0.97 10 17 1.9e-05 0.0047 18.7 4.3 1 23 588 610 588 610 0.97 11 17 0.12 29 6.8 6.6 1 23 619 642 619 642 0.94 12 17 0.0088 2.2 10.3 3.9 1 23 648 670 648 670 0.96 13 17 5e-05 0.012 17.4 1.2 1 23 675 698 675 698 0.96 14 17 0.014 3.4 9.7 4.8 1 23 704 726 704 726 0.98 15 17 0.00099 0.24 13.3 4.4 1 23 730 753 730 753 0.96 16 17 0.0035 0.85 11.6 0.3 3 23 761 781 760 781 0.98 17 17 2.2e-05 0.0054 18.5 1.5 1 23 787 810 787 810 0.97
Sequence Information
- Coding Sequence
- ATGCAACATCACCAATCCAGTTCAACATCATCGAATTCATTTAAAACATGTACTGCAACTAGAGAGGAGAGTTGTAAAAATGAAGATACACCTTCTAGATCTCCAATATTAGTTAAAGCATTAGATGTTTGTTCCAGGAAACTGCTGACATCTATTAATCTTAACATATGTGACGATGAAATATCTCACAAACTATCAAATCAGAGTAAGTCGATCGTGAGGAAACAAGTATCCAAAACTCCTAGAAACCTGTCCACCGTTAAAAAATATTTCCTTCGTAAGTTACCCAATAAAATCGACGCAATCGATGTCGCATCCGAAGAAGACACCGAGGATCTAATGTCGAAATTATCAGTGTATAAACTAATGTCCGAGGGTAATTACGGTTGCGAACTCTGCAGATCGAAAAACATACGAACCATCCTGGAAAAAAAAGCGTTGATAGTGCGTCATTTACTACGAGCTCACACCTATTGCCACACCTACGAATGCTCTAACTGTTCGAGTACCTTTAAGAAGAAATCATGGCTGCGGAATCATTACGACACCGAGCACCGCGAAGCCGATAATAACAAACAATTCGAGTGCGTGAAATGCGAACATAGAAGCAAGAACGCAGATCTACTTAGACTACACGCTTTGAGAAAACACGCGGCTGTGTATAAATATGTTTGTAGATGTTGCGCTAAATGCTTCAAAACTTGGAGGGCAAAAAACGAACACGAAAAGATAAAAGGAAGGATCGACAAATCGGAACCCAAACCAAGATACGTATGCGACATATGCAGCGGTATTTTCAAAACGAAGCAAGAGCTCATCGTACATCTGAGAGATATTCACTCTGAGAATTTTTACAAGAATGGAGTGAAAATTCTCCGCAACTGTAAGCACTGCAACAAGCTCTTCATGTCCCGCAAATCGTTGCGCGAGCATTTGTCCAACCATGAAATAATTTATTCGAATAACACCGTGAAATTCGAACACAACCCCAAGATCGATGGGTTCGCATGCGACGTGTGCGGCAAGCGATTGTCTAGCAAGGATCACCTGAAGAAACATGCTCGTGTCCACAGCGGAGAACGGCCCTACGTCTGCCCCGAATGTGGTCAAGCCTTCGCTCTACGTACGACGATGAGGATTCACGCGCTTTCCCATCGGGGAGTTAAGCCCTACGTTTGCGAACTCTGTGAACTCGGTTATTCGCAAAGATCCGCTCTTATGACGCACTGGAAAAGTAAGCACAGGGGATTACCCGCGCCTCCGCCAATCGAGATCCATCACTACTTCGACGAGGAGGGAAGGATTGTTGCACCTTGTGAGAAAGACTTTACAAGTTCGTTCAGAAAACAAAGTATCATCTCCAGGATACGAGTGCGAACGGCCTCGGAACTCACCGAATCAAATTCCCCAAAACGCGAGCAGATTCAAGATAAACCAGTGATTAAAGTTATGCCTAAAAAAATCGTAAAACCAGCTTCCAAGAGAAAACGTTTGTTTCCATCTAAAATAGCCAAAGATAATGTCACCGATGATGATTTGTCAACTACGGAATCACCGTCCAAGAACGCAAAACGAGATATTACTTCTCGAACAGCCGAAATGCAAGCAAAATCACTCGAAATTAAGGAAGAGCTTGCACAGCCTCTCATGTACAAGAAATTGAAGGGAGGCGGCTTTGGCTGCAAAGTTTGCCATCAAAAGTATAGCCATAGATATAAGGTGAAGCAACACATAAAAATGAAACACACTCCGCGTGAAATTTTCAAATGCAACGATTGCTCTAAAACTTTTAAATCCAAGTATCAGTTCAATGTGCATTCGAATCAACATCGCGAAAATTGTAGCGATTATTTGTTTTGCTGCGACAAATGTGACTATAGAGCTAAATCTAAACATTACCTTAAGACTCATGAAATACGCAAACATACAACCGAGTATAATTTCGAGTGTGATCATTGCAGTAAGCGTTTTAAAATGAAAATGGATCTTAAGTTTCACTTGGGTACCCATGGCGCCTCTCAGCATATGTGCGACGCCTGTGGGCGTATGTACACCAGCCAAGACTCGCTTTACAAACATCGTCGAGTAGTACATTTGAACGATTATAAATTTCAGTGTCATATTTGCCATCAGAAGTTATTGACGCAAGAGAACTTTAATAGTCACATGGAGTCTCACAAGAATCTTCACAGTTGCGACGAGTGTGACTTAAAATTCACAAAAAAGTATTACGTCACGAGGCATAAAAAACGAGTACATAAGGTTGAAAAGACGAATCTTTGCCCCGTGTGTGGTAAAGCTTTCGTATGTATGGCGACTCTAAGAGTTCATTATTTGACTCATGCAAAAGTCAAGCCTTACATGTGCAACGTATGCGGTTTCAGTTTCACACAACGTTCTTCGATGATGCTGCATTGGAAGAGAAAACATCCGGATGCCGAAGATCCACCACCACCTGTGATATTAACGAACTTTTTCGATGCCATACAGTCCGAAGTGAATAAGCTCGTTGAGACGACCACGCACTTCCCGCCCAATGAATCCTGCCAATCTGGAACCACTGCAGTCTAG
- Protein Sequence
- MQHHQSSSTSSNSFKTCTATREESCKNEDTPSRSPILVKALDVCSRKLLTSINLNICDDEISHKLSNQSKSIVRKQVSKTPRNLSTVKKYFLRKLPNKIDAIDVASEEDTEDLMSKLSVYKLMSEGNYGCELCRSKNIRTILEKKALIVRHLLRAHTYCHTYECSNCSSTFKKKSWLRNHYDTEHREADNNKQFECVKCEHRSKNADLLRLHALRKHAAVYKYVCRCCAKCFKTWRAKNEHEKIKGRIDKSEPKPRYVCDICSGIFKTKQELIVHLRDIHSENFYKNGVKILRNCKHCNKLFMSRKSLREHLSNHEIIYSNNTVKFEHNPKIDGFACDVCGKRLSSKDHLKKHARVHSGERPYVCPECGQAFALRTTMRIHALSHRGVKPYVCELCELGYSQRSALMTHWKSKHRGLPAPPPIEIHHYFDEEGRIVAPCEKDFTSSFRKQSIISRIRVRTASELTESNSPKREQIQDKPVIKVMPKKIVKPASKRKRLFPSKIAKDNVTDDDLSTTESPSKNAKRDITSRTAEMQAKSLEIKEELAQPLMYKKLKGGGFGCKVCHQKYSHRYKVKQHIKMKHTPREIFKCNDCSKTFKSKYQFNVHSNQHRENCSDYLFCCDKCDYRAKSKHYLKTHEIRKHTTEYNFECDHCSKRFKMKMDLKFHLGTHGASQHMCDACGRMYTSQDSLYKHRRVVHLNDYKFQCHICHQKLLTQENFNSHMESHKNLHSCDECDLKFTKKYYVTRHKKRVHKVEKTNLCPVCGKAFVCMATLRVHYLTHAKVKPYMCNVCGFSFTQRSSMMLHWKRKHPDAEDPPPPVILTNFFDAIQSEVNKLVETTTHFPPNESCQSGTTAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01524188;
- 90% Identity
- -
- 80% Identity
- -