Basic Information

Insect: Dolichoris vasculosae
Gene Symbol: -
Assembly: GCA_018907195.1
Location: JACCHY010000035.1:1240637-1243456[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3e-06 0.00074 21.2 2.0 1 23 305 327 305 327 0.98

2 12 0.0002 0.048 15.5 6.4 1 23 331 353 331 353 0.98

3 12 0.0011 0.28 13.1 2.2 1 23 358 380 358 380 0.96

4 12 3.9e-05 0.0094 17.7 2.0 1 23 432 454 432 454 0.97

5 12 0.00065 0.16 13.9 1.3 1 23 459 481 459 481 0.97

6 12 6.8e-05 0.017 17.0 1.5 1 23 530 552 530 552 0.98

7 12 0.00034 0.083 14.8 1.8 2 23 560 581 560 581 0.97

8 12 8.7e-07 0.00021 22.9 2.1 1 23 592 614 592 614 0.96

9 12 0.0002 0.049 15.5 1.6 1 23 620 642 620 642 0.97

10 12 0.00014 0.034 16.0 0.7 1 23 648 670 648 670 0.98

11 12 4.2e-06 0.001 20.8 2.0 1 23 676 698 676 698 0.96

12 12 7.5e-05 0.018 16.8 0.3 1 22 704 725 704 725 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3e-06	0.00074	21.2	2.0	1	23	305	327	305	327	0.98
2	12	0.0002	0.048	15.5	6.4	1	23	331	353	331	353	0.98
3	12	0.0011	0.28	13.1	2.2	1	23	358	380	358	380	0.96
4	12	3.9e-05	0.0094	17.7	2.0	1	23	432	454	432	454	0.97
5	12	0.00065	0.16	13.9	1.3	1	23	459	481	459	481	0.97
6	12	6.8e-05	0.017	17.0	1.5	1	23	530	552	530	552	0.98
7	12	0.00034	0.083	14.8	1.8	2	23	560	581	560	581	0.97
8	12	8.7e-07	0.00021	22.9	2.1	1	23	592	614	592	614	0.96
9	12	0.0002	0.049	15.5	1.6	1	23	620	642	620	642	0.97
10	12	0.00014	0.034	16.0	0.7	1	23	648	670	648	670	0.98
11	12	4.2e-06	0.001	20.8	2.0	1	23	676	698	676	698	0.96
12	12	7.5e-05	0.018	16.8	0.3	1	22	704	725	704	725	0.96

Sequence Information

Coding Sequence: ATGGCAATAAATAATAGTTATTTCGTCATGCCAATGAATATGGATACGGTTTGTCGAATTTGTTTGCAAGAGAATACAAATTTATCACCTATTTTCTGCAATGGGCAGGACGTAGGAAATCTTTCGGATTTGCCGCAAAAAATCCAAGTTTGCGGAGCTGTTGAATGTCACGAACACGATGGTCTACCTGCTCTGATCTGCGATGTTTGTATATATAAAGCAAGCGTTGCGCACGAATTCAGACAATTATGCCAACACTCGGATACTCGATTGCGGCTTTATTATAATAAACCTGCTAAATATAATGCTATTGATTCTGGGACACAGACTGATTTACAAACTCAAGTTATTTTAACAAAAACTTCTGAAGAATTACAAAATCACTATTTTGTAAAACAAGAAGTAATGAATAATCATCAATTTCATAATACATTATCAAGTGAAGAATATAATCCAGAAACACAGAATAACTCAGTTGTAACAGCAATCGAATCATCTATGCCTTCTGTTGATGTAGCTATATCAGTCGAGGAAGAAAAACTTTTTAATTGTCATCTTACTTTTGAGGAACAACATAAAGATGATAAAAATTCCGATGTTGTATCTTGCGATACTCAATCAGTAGCGTGTACACAAGAATTAATTCCAGTTTCTACAAATTTAATCGATAGCGTTTGTAATATAGAAACAGATATAAATACATCGGAAAACGAAGTAAAAAACGATGTTAGTTACTATACTTATATGACAAAAGATGATCACGAAACCATCGTTGAAGAAGAAAATAGTTTAGAAAAACGAACATCATCTAGAAAACTGAAACTCTTGCAAAATAATACTTTTGATAGCGAGGATATTGAGCAGGATTATTTTGAAGCGGACAGCGATAGTCAAAATTTAGAAGACATAAAATTTAAATGTGAAATATGTTCAAAATTTTACAGTACACAAAAAGGTTTAAAAAAGCATCAATTAATTCATGAAAAACAACATAAATGCGATACTTGTTCAAAAACATTTTGCAAGTTGGAAAATTTAGAAAAACACAAAAATATTCATACAACAAAACCGCACGCTTGTCAGTTATGCTATGCCAGTTTCTCGAAATCTCAAAGCCTCGTTAAACATCTGAAATCTCATACCGAAAAAGTTAACGACATTATAAAACAAATAAGTTCCGACGATCAAAAAGAAGAAATAGATGTAAAAAAAAATTTTAAAAGCGAAGAGGACACAGAGGATGAAAGTGGAAATGGACTGGAACCCGATGGTTTTGAGAATGCGCCAGAAATCTTCAAATGCGAAGTGTGCGGTCAATACTGTTCAACGTTAAAAAATTTAAAACGCCACGCTCTTATTCACGGAGAAAGAAAATATTCCTGTACCGTTTGTAAAAAGTGGTTCTTCCGACCGGATACGTTAAAAAAACATGCGGAGAGACACGGGCATGGATTACTCGATAATCTTGCCGATGATAATAAATTGTATGATTCGGACGATGATCCATTTCCACAGGCGACAAACAGTGGCACGGTAGAAAACGATAACGTGAAAAAAGACGAAAGCGAGGAGGAAGGTAACGGCGAGTACAAGTGTCAACATTGCGACAAGGTAATGGCTACGAAGAAGGGCTTGCGTAGACACGTAGCTATGCACAAACCTAAACCAGAGCCAGCGGTTTGTGAAATATGTAAAAAAGTATGCGCCAGTCGTGCTCGCCTCACCCTCCATCAAAAAACTCATAACAAACCTAAAGAAAAGGTACCACGAGAGTATCTATGTCATATATGCAGCAAGGTATATCCCAGTAATTCTTCGCTTACCTATCACATGAGAACTCATACAGGTGTTAAACCTCACGTTTGTAAAACCTGCAACAGTGGCTTTACAACAACGACAAGCTTAGCTAACCACATTCGCATTCATACCGGCGATAAGCCCTTTGTTTGTCATGTATGCAGTGCAGCCTTCGCAGTTAGTTCTGCCTTCAGAAGACACTTGACACGACACACGGGTGAAGCTAATTATCTCTGCAAAACGTGCGGAAAAGCCTTTAAACGGCTTAGTACATTAAAAGAACACACTTATACGCATTCCGGGGAGAAACCTTATGTCTGTAAGACTTGTGGAGCAGCATATAGTCACAGTGGCAGTCTCTTTGCTCATCAAAAGCGATGCAGAGTTCAGTATACTGAGATGGTGGTAGAGGATCACCATCATACAGTAGCTCATCATATCCATGTTAATAATGTGCAATCCGCAGTGCGGTCGCTTGCTGTGATAGGTCAGATGTTTTGA
Protein Sequence: MAINNSYFVMPMNMDTVCRICLQENTNLSPIFCNGQDVGNLSDLPQKIQVCGAVECHEHDGLPALICDVCIYKASVAHEFRQLCQHSDTRLRLYYNKPAKYNAIDSGTQTDLQTQVILTKTSEELQNHYFVKQEVMNNHQFHNTLSSEEYNPETQNNSVVTAIESSMPSVDVAISVEEEKLFNCHLTFEEQHKDDKNSDVVSCDTQSVACTQELIPVSTNLIDSVCNIETDINTSENEVKNDVSYYTYMTKDDHETIVEEENSLEKRTSSRKLKLLQNNTFDSEDIEQDYFEADSDSQNLEDIKFKCEICSKFYSTQKGLKKHQLIHEKQHKCDTCSKTFCKLENLEKHKNIHTTKPHACQLCYASFSKSQSLVKHLKSHTEKVNDIIKQISSDDQKEEIDVKKNFKSEEDTEDESGNGLEPDGFENAPEIFKCEVCGQYCSTLKNLKRHALIHGERKYSCTVCKKWFFRPDTLKKHAERHGHGLLDNLADDNKLYDSDDDPFPQATNSGTVENDNVKKDESEEEGNGEYKCQHCDKVMATKKGLRRHVAMHKPKPEPAVCEICKKVCASRARLTLHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRVQYTEMVVEDHHHTVAHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01524177;
90% Identity: iTF_01524177;
80% Identity: -