Dnox000488.1
Basic Information
- Insect
- Diuraphis noxia
- Gene Symbol
- lolal
- Assembly
- GCA_001186385.1
- Location
- NW:128471-131007[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-26 8.6e-24 83.3 0.9 3 99 24 116 22 123 0.92
Sequence Information
- Coding Sequence
- ATGAATACTTCCACACAATACAGCATGCGTTGGGACGACTTTTCATCCCATTTCACAAACGAATTTGTGTCTCTACGGAATGATGAACAATTCGTCGATGTTACTTTATGTTGCGACGATCAATTCATCAAAGCTCACAAAGTTATTTTATCAGCATGCAGcccttattttaaaaaaatactcatgaTGAATCCATCAAAACATGTCACAGTTATTATGCACAACGTGGAATATGAACTCATGAAGACTTTAGTTGACTTTATGTATTTGGGAGAAGTActtgtaaatcaaaataatgttgatagattttttaaattagccaaaacatttaacataaaaGGATTTCAAAATggattcaataaaaatgaaaCTTCAATTTTGCCATCTTTATGTGAAAATGTTGAGCAAGATGTGCCAAAAAATGATGTTATTGATTCAATGGACAACCATGATGATGGATTATTTGCTAATCAACTAGATCAACTCAATCAACTTGTAAATCccaatgaaataattAAACGAAGGaaaatagaaacaaattatTGGCAACAATCTTCTGAATCAACTCCATCAACACAACCAGARAAACAGAGGTGTCATTCTTTGGATCCACGGCCATGTCCAGAATGTGGACGTCAATATAGCAGTTTATCCAACTTAAGGCAGCACATTGAATTAATTCATAAACCTGGTTGTGTTGTTTGTCCTTTATGTGgtaaaacattcaaaaataagCTTTATCTACGGCGGcattttataagttttcatGAAATGTTACCATCCAAAGTACAAAATACATCTGACCCAGGTACACCTTACACTTCAAATCCATTACATTATCAATCTGATCAAAACCAACAaagaatacaaataaaagaaCAGTCTAATAGCCAACAATTAAGTTCTACTTGTTTTGATCAAAGTATACATCCACGATAA
- Protein Sequence
- MNTSTQYSMRWDDFSSHFTNEFVSLRNDEQFVDVTLCCDDQFIKAHKVILSACSPYFKKILMMNPSKHVTVIMHNVEYELMKTLVDFMYLGEVLVNQNNVDRFFKLAKTFNIKGFQNGFNKNETSILPSLCENVEQDVPKNDVIDSMDNHDDGLFANQLDQLNQLVNPNEIIKRRKIETNYWQQSSESTPSTQPEKQRCHSLDPRPCPECGRQYSSLSNLRQHIELIHKPGCVVCPLCGKTFKNKLYLRRHFISFHEMLPSKVQNTSDPGTPYTSNPLHYQSDQNQQRIQIKEQSNSQQLSSTCFDQSIHPR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01434465; iTF_00670530; iTF_01033123; iTF_00134884; iTF_00136260; iTF_00670372; iTF_00019750; iTF_01032486; iTF_00340712; iTF_00463625; iTF_00973322; iTF_01329098; iTF_01032267; iTF_01169996; iTF_01499916; iTF_00019373; iTF_00941773; iTF_01167791; iTF_01346703; iTF_01347343; iTF_00308944; iTF_00309104; iTF_01304976; iTF_01305776; iTF_00973169; iTF_01033330; iTF_01038514; iTF_00184883; iTF_01170163; iTF_01304467; iTF_01305139; iTF_00942261; iTF_00134614; iTF_00135734; iTF_00340918; iTF_01038774; iTF_00184728; iTF_00469208; iTF_01330715; iTF_01434171; iTF_01168028; iTF_01499772; iTF_01304317; iTF_01346557; iTF_00135518; iTF_00136414; iTF_01329343; iTF_01347551; iTF_00469056; iTF_01305984; iTF_01330912; iTF_00812126; iTF_00812295;
- 90% Identity
- iTF_00670372;
- 80% Identity
- iTF_00463625;