Dnox011030.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diuraphis noxia
Gene Symbol
Hr39
Assembly
GCA_001186385.1
Location
NW:276830-298370[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.082 3.3e+02 -0.1 5.2 61 189 145 286 72 318 0.55
2 3 6.7e-08 0.00028 19.9 0.1 1 65 402 467 402 497 0.83
3 3 9.9e-68 4e-64 217.0 0.1 202 408 511 720 459 720 0.90

Sequence Information

Coding Sequence
ATGGCAGACAGTGACACCAGGATGTGGGGCCATAGCGTGCAGGTATCGTCCGGTCCGGTCACCGTCACGTCCATCAATCTGATCGCTCCTCGTCTGCAGCCCAACACTCAGATCACCACGATAAAAGAGGAACCTCACGACAAGGACGGTACAATGACCGAAATAAAAGATGACATCATCGACGAAGTGGGTTCTGAATGCGATCGGGAAGTAAGTAAGATAGACTTCTCTGGAGTTACTATGAGAAGTAAAAAAATGAGAGCGGTAGAAGAAAACATGCCTCGGCCAATGTCCTGGGAAGGAGAACTTTCCGATTCGGAAATGAAACAGGAAGAAGATAGGACAGTGGACGTGCAGACAgcgaatcaaaattatttacttccacgaaatgaaaatgtaaataaccaACAGTCGTCTCCAGTTAAACGaattatttatgatgataataatttggTCGATCGAGTGATGGAGCATGTCAAGAGCAAAGTAACTTCGTCGAACAACGACATTCCGTTACTTGTTGATAAATTGTTAGGTGGTGGTTACAGCCCTTTACTCCAACATAGAACTAATGGAGTTAAACATACATCACACATTCCACCAACTCAAAGCCCAGACTCGGCCATACACTCTTGTTGCTCACCTGCACAGTCACCAATCACTTCTAGACATAATCCWCCATCATCTTCAGGATTTTCATCTCCATCCACATTCACACCGTCGTCTTTGTCGAGGAATAATAGCGATGCTTCACAATATGGTGGATCACAACATAGTTCTTGTTATAGTCAAAGttattCCTCACTGTCTGTTTCTCCTACTCATTTTTCCCCGACACAATCACCAATACAGCCAAGACACATACAAAGAAATTTTCATGAATATAATGTGGCAGAAGAAAACAATGGCTATGAAGAGAAGTTGTCAATGTCTGACATTGGTCAACAACATGGCATAACATCTGGTATTTCAAGGCAACAACTGATAAATAgTCCCTGTCCAATTTGTGGTGATAAAATTTCTGGGTTTCATTATGGCATATTTTCATGTGAGAGTTGTAAAGGATTTTTCAAGCGAACTGTACAAAATCATAAGAACTATGTGTGCCTACATGGTTCAGCATGTTTGATAACAATAGCTACACGCAAGAAGTGTCCAGCTTGTCGCTTTGACAAATGCTTGAACATGGGTATGAAACTAGAAGCAATCAGAGTGGATAGAACAAGAGGTGGACGTAGTACKTATCCGTTTACTTACACAATACCACCTTCTAATATGCAGCCACAACATAGTGGACAGCACTCTGGAATGAACTCTAATTCTGTAGAAAATAAAGTCAAGCAGGAAGAACGAACGTGTAGGTCTCCCCCTCAAGAAGCAGCCAGACTGATCCCTCCATTATTGCAAgaaataatGGAAGTGGAACATTTATGGACTTATAATGAAGGATCATTTGAATCAACATGTGCTAGTGGAAGTTCTATGAATCATTGTGGTGGTGCCAAAGAAATAGCTAAGAGTCGCTTAATGGCTGAAAATTCAGGAACCGATTTCCTTTCTAATTTATGCAACATTGCTGATCATCGGCTATATAAAATAGTCAAATGGTGCAAATCGTtaccattatttaaaaacatttcgATTGATGATCAGATATCGCTATTGATAAATGCCTGGTGTGAGCTACTGTTATTCAGTTGTTGTTATCGTTCAGTTAGCAGCCCTGGAGAAATACGTGTCAGCCTGGGCAAGTCCATTTCTTTAGATCAAGCAAGAGAATTAGGCTTAGCACCTTGTATTGAGCGTATGTTGAATTTTACTCAGCACCTGAGACGTTTGAGAGTTGATCGTTATGAATATGTAGCCATGAAAGTCATTGTGCTGTTATCATCAGATACAAATGATTTAAAAGAATCAGAAAAAGTTCGYGCATCCCAAGAAAAAGCATTACATGCTTTGCAACAGTACACTCTGACACATTATCCTGAGATGCCATCCAAATTTGGAGAATTGTTGTTAAGGATACCTGATCTACAACGTACTTGTCAGCTATCATATGAAATTGGATTAATGGTCGGAAAAGAAATGTTGTCAATAAAGAGTAAAGAAGGAGAAGGGCAAAGCTTCAATCTTTTAATGGAGTTATTAAGAGGCGatcattaa
Protein Sequence
MADSDTRMWGHSVQVSSGPVTVTSINLIAPRLQPNTQITTIKEEPHDKDGTMTEIKDDIIDEVGSECDREVSKIDFSGVTMRSKKMRAVEENMPRPMSWEGELSDSEMKQEEDRTVDVQTANQNYLLPRNENVNNQQSSPVKRIIYDDNNLVDRVMEHVKSKVTSSNNDIPLLVDKLLGGGYSPLLQHRTNGVKHTSHIPPTQSPDSAIHSCCSPAQSPITSRHNPPSSSGFSSPSTFTPSSLSRNNSDASQYGGSQHSSCYSQSYSSLSVSPTHFSPTQSPIQPRHIQRNFHEYNVAEENNGYEEKLSMSDIGQQHGITSGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNHKNYVCLHGSACLITIATRKKCPACRFDKCLNMGMKLEAIRVDRTRGGRSTYPFTYTIPPSNMQPQHSGQHSGMNSNSVENKVKQEERTCRSPPQEAARLIPPLLQEIMEVEHLWTYNEGSFESTCASGSSMNHCGGAKEIAKSRLMAENSGTDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINAWCELLLFSCCYRSVSSPGEIRVSLGKSISLDQARELGLAPCIERMLNFTQHLRRLRVDRYEYVAMKVIVLLSSDTNDLKESEKVRASQEKALHALQQYTLTHYPEMPSKFGELLLRIPDLQRTCQLSYEIGLMVGKEMLSIKSKEGEGQSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00340610;
90% Identity
iTF_00941576;
80% Identity
iTF_00463423;