Dang024789.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829498.1:5730074-5759702[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.032 2 9.7 0.1 2 23 497 518 496 518 0.93 2 16 0.01 0.65 11.3 0.1 1 23 528 551 528 551 0.95 3 16 0.054 3.4 9.0 3.8 2 23 749 770 748 770 0.95 4 16 0.00022 0.014 16.5 0.4 2 23 813 836 812 836 0.97 5 16 0.056 3.5 8.9 0.2 1 23 842 864 842 864 0.93 6 16 0.0033 0.21 12.8 3.3 1 23 870 892 870 892 0.98 7 16 0.17 11 7.4 0.1 1 23 998 1020 998 1020 0.96 8 16 3.1 2e+02 3.4 7.2 1 23 1027 1049 1027 1049 0.95 9 16 0.0021 0.13 13.4 1.8 1 23 1089 1112 1089 1112 0.95 10 16 0.00089 0.056 14.6 1.8 1 23 1119 1142 1119 1142 0.98 11 16 0.021 1.3 10.3 0.2 2 23 1164 1186 1163 1186 0.96 12 16 0.0025 0.16 13.2 1.8 1 23 1197 1219 1197 1219 0.98 13 16 0.00087 0.055 14.6 2.2 3 23 1225 1246 1224 1246 0.95 14 16 1.7e-05 0.0011 20.0 1.0 1 23 1252 1274 1252 1274 0.97 15 16 0.0001 0.0065 17.5 0.2 1 23 1280 1302 1280 1302 0.97 16 16 0.0047 0.29 12.3 0.1 3 23 1310 1331 1308 1331 0.95
Sequence Information
- Coding Sequence
- ATGGCAGAACAGCCCCCCCTGATCCTGTGCATGGAGAATGCAGCGGGCGAGGAGGTGTCCCTGAGCATCCAGCCTCACGACAACTTCCAATCGTTCTTGCTTAAAGCCAATACATTGCTTGGTTACGAGGTAGACCTGAATTCAGTAACCAGAAACCAACCAGTCGCTTTGACAGACAACATATACCAATTTCTCATGAATGCTGAAAATAACATGCTAGAGTACCCACAGCTTGGCCAAAGCTTTGATCAAATGTTGGAGCCAAATGACGACACAGACGACTTAGTCTACGTTTTAGATGACGGCACTCAAATAAAGGCTTCCCAAATACATTTTGACAATGAAGACCAACCTATTGACTTTACCGCTGAGAAAATACCATTCGTTAAATATATTGATGACGGCATAGACGAGGTTGAGGAACCTAAGGATGTTAACACTAAAATGATTAACATTATTGAAAGTCCAGTGTACAAATGGTCTAGCAACTCTAGTCCTAAGAAAGGATTCGTGAACAGTCTCCCTTTTAAACTAGTATGCAATAACACGTCAGGGTTTGAAGCTCAGTTCACTAAATATCTAGAAGCTAACAGCGACAAAACCTTCACACCTCTTAACACTGTGACAGCTAGAAATAAGTCACCTAGAAGCTTGATCAGGGATAATTATAAGAAATACGATGATaatgtttataataaaacaGATAACTATACTTTAACTAGAGATGAAGTGTTGAATCTGTTCAAGGATCCACCGATAGCTTTACCCTATGAGGGTTACCACAGTTTCAATGACAAGCGCAGGCATGTACGCAAAACGGACCCCTCACGTCCAGTGCATAAAGCTTGGAACGCTAAACTAATGCCGTACGTAGATGTCGATGGAACTCTGATAGGTCAGAACGAGAgccaaaattgttttatttgcgaGAAATTCGTCGATAACAACATAGAAAAGTTGTATCTCTTTGATAATGAAGACCAGAGGCTGCATAGATCGTCGCCACCTAAGAAATTATCCACGCAGCTTAAGATCATTTGCGAACATTGCTTAAACGACAACTTTAAGCCTTCGAGAATGAAAAGTCCAAATAAAAACCTGGATCCTGATGAATATCTAGTTATCAGAAACAATCAGCAATACATATTCCAGAAGACAAATGCGATAGATTTCAAAAACATTAGAGGTGGCTTCGTTAACATTGGCGAAGCGACAGCTATCATAGACAAAATCGAATCTAAGATGATGAAAGCAAGTGCTAAACAATTGGATTTCGTGAAAGTTGAAATTGGTTCGGACGGTGAGATAGTCACGAAAGATAAAGACGGTGGTATAAAAGATGAGAAAGACGATTCCAGCGACGTAGAGATCATAGAGACGGGACCGGAGATAGATGATGTCATAGACAATTTGGAGGAAGCGGATGAGGAAGTGAAGGAGTTTCTGGGGATGTACCAGCGGGATAGCAATGCTGTTAGCAGTGAATTAAAATGCAGATTTTGTGAGCGCGTGTTCGTGGATTTGACCGAGCTAATGGAGCACGGAGACGTGCATAGACACCTTTTGGAAGACGGCGAGGTGTTCCCGTGCCCTTTGTGCAACTACGGATATGCTAACTACAAATGGTTGAAAGGGCATCTGAAGGCGGCGCATGACTACTCGTCTAAAGCAAAGGGAAGCAACGACAAGGAGCAGAAGGGAACAGAGGCAACAACCCCTCCCGCGTCGCCGGTTGCTAAACGCACTAGAAGTAATAAGAAACCTGAGAAAGATCAAAAAGACGAGTCTGCTAAACCTGAGGATGACAAACCGACAGATTCTCTGGAGTCGGCCAATGGCACGATGGTCATCAAAACGGAGGTGAAGCAGGAGGCGCTGGACACGAGTGATGAAGAAGCCATCTGGATTGTACATACCGCCGATGATGAGTCCGCTGATCAGCTGCACAGCCTGCTGCAGGGCACGGATAAAAAAGAAGAGTCCTTGTTTAAGAAACCTCTGAAATGTGACAATTGCAGCCAAATAATGATAGACGCGTCGACGCACAAGTGTCGCAAGCGCGGCCGGAAACGGAAGTGCGTGAACAAGCACGAAACCGTTATATGCGTGCCCACGCAGGAAGACTTTTTAAAGAGAGCTCAAGGTCGGCCAAGACACGGCACGGATGAATCCAATACCGGTTTACTGGTTGAGAGATCACGTAAAAAGAAGGCGTCAGACTTGACCTCCAACCCGCAGATAGTGACTTGCCACAACTGCAATGAATCCTTTACGTCCAAAGTTCGTCTGAAGTTTCACATGcaatttcacgaagctacaccCATGCGTACGGCAGCAGGCCAGTTCACGTGCACCGAGTGCGCGCACGAGGAGTTCGCGACGGAGACCGAACTGTTCGACCATCTGCACTTCAGGCACCACAAGCAGCGGCGGTGGCAGTGCCCGGTCCAGGGCTGCGGGAAGACCTTCTTCCTCAGAGCGACACTGACGAAACACAGTCGCACGCACACAGACACGCGGCGCTACGTGTGTGGTACATGCGGGAAGAGATTCTTGGACAAACAGACTTTGGACGAGCATGGGGTTACACATTTACAGATCAAGCCGTTCCAATGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGGCTGCGCATGCACCTGCGCGCGCACGAGGAGGCGCTGTGTCCCGCGCTGGTGGCCGTGTGCGCCGCGTGCTGCCGCGCCTTCGCCAGCGTGGCGCAGGCGCAGGAGCACGTGACTAAATCAGCGGACTGCATCGACACGTTCGCCAGAGAGTCCAAAGAGAAGACGGAAGAGCCCACCGCAGTCCTGTCGCCCACTAGTGGGCTCGTGCGGCCCGTCACGAAGCAACCCGAGCCGGCGTGGATCGCGTGCGaggcgcgctgcgcgggcgcggcggcgctgctGGCGGCGCTGCCGGCCGCGCTGCGCGGCGCCGTGCGCGCCGTGCGCGTCGAGAAGGCCTTCCGCTGCGAGTACTGCGAGGACGTTTTCTACCTGGAAGAGGCCCTGAATAACCACCGAGTGATACACAAAGGGATTAAAAACCCCTTCACCTGTCACATCTGTAAAGTCAGCTTTGCCACCTACTCcagGTGTACCACGCATAAAACCACTCACGGCTTCTACAAACGTTCCCTGGCTGATGCCAAAAAGCAGGACAAGCCGCTTAAAGAGGAGGCTGGGCCCTCTGCCAACGGGATCCTGGGCTACGGAGGGTTCCCGGTCGTCAAGCACTTTCTGTGCGAGGACTGCGGCCGTTCGTATTTGCACTGGACGTATCTGCAAGTTCACAGGCGCATGAAGCATGCCAATGAGAACTTCATCTACAAGTGCAACCACTGTGACCTCACGTTCCCGAACAGTTGGAGTGTGGCATACCACCGGAAGAAGGTTCATGGCAAGACTGGACTCGACGAGGGGAATGGCACCACCAAAATGGTCAAAGACGACTACAGGATCCCTTGTCGCGACTGCGAGGAGGTGCTGCCAAACAAAACCGCGCTCTATAAGCATAGGAAGAAGGAGCACAGTGACTTGTCGTTGCAAATTAATAGCGTGCACGTTTGCCACGCGTGCAACAAGCGCTACGCGTCGCGCGCCGGCCTTGACGCgcacacacgcacgcacacgTCGCGCGCCGCGTGCACAAAGTGCGGCGAGAGCTTCACGCACACAGACGCGCTGCACCAGCACTTGAAAGACATCCACGGGCACGAGCTGGACTTCCACTGCAACGTGTGCTCGAAGAGGTTCCCGTCGCGCGGCGAGCTGTCGGCGCACATGCGCGCGCACGCGGCGCGCCCCGCCTTCCCCTGCGACCTCTGCGGACAGGCCTTCCGGAGGTCGACGGCGATGCGCAACCACCGCCTGATCCACACGGGCGTCCGCGCGTGGGCGTGCGCGCGCTGCCCGCGGCGCTTCCGGCTGCGCGCCGAGCTCGCCGCGCACCGCCGCCGCGCGCACCCCGCCGCGCTCGCCGTCATCGAGGTGGAAGGTTTGAACCCGGGTGCCGACAAGGTGATGGAATGCCTCGCCGCCAACAACATTCAGCACGAAAATGTGGTCGAGATCACCAAGATGTCGTTTACAAAGGGCACGACGAGCGTGGTCCCGGACAgtgcgcgcgcgctggcgctgctggccgcggcgccgcgcgcgcccgtgGCCTGGccgcgcgcggcgcacgcgcacacCGtggcggcgtgggcggcggcgcggcgccggcccgCCATCCTGCAGCGCGCCGCCTGCCCCGCGCCTGCGCAGCACGAGgaGCTGACAGGCTTGAACGTTCAAATGCTGCTTCGGGACAACGGGCTCGACAACCAGCCGCTCGACCACTCTCTGCTGCTCGAATAG
- Protein Sequence
- MAEQPPLILCMENAAGEEVSLSIQPHDNFQSFLLKANTLLGYEVDLNSVTRNQPVALTDNIYQFLMNAENNMLEYPQLGQSFDQMLEPNDDTDDLVYVLDDGTQIKASQIHFDNEDQPIDFTAEKIPFVKYIDDGIDEVEEPKDVNTKMINIIESPVYKWSSNSSPKKGFVNSLPFKLVCNNTSGFEAQFTKYLEANSDKTFTPLNTVTARNKSPRSLIRDNYKKYDDNVYNKTDNYTLTRDEVLNLFKDPPIALPYEGYHSFNDKRRHVRKTDPSRPVHKAWNAKLMPYVDVDGTLIGQNESQNCFICEKFVDNNIEKLYLFDNEDQRLHRSSPPKKLSTQLKIICEHCLNDNFKPSRMKSPNKNLDPDEYLVIRNNQQYIFQKTNAIDFKNIRGGFVNIGEATAIIDKIESKMMKASAKQLDFVKVEIGSDGEIVTKDKDGGIKDEKDDSSDVEIIETGPEIDDVIDNLEEADEEVKEFLGMYQRDSNAVSSELKCRFCERVFVDLTELMEHGDVHRHLLEDGEVFPCPLCNYGYANYKWLKGHLKAAHDYSSKAKGSNDKEQKGTEATTPPASPVAKRTRSNKKPEKDQKDESAKPEDDKPTDSLESANGTMVIKTEVKQEALDTSDEEAIWIVHTADDESADQLHSLLQGTDKKEESLFKKPLKCDNCSQIMIDASTHKCRKRGRKRKCVNKHETVICVPTQEDFLKRAQGRPRHGTDESNTGLLVERSRKKKASDLTSNPQIVTCHNCNESFTSKVRLKFHMQFHEATPMRTAAGQFTCTECAHEEFATETELFDHLHFRHHKQRRWQCPVQGCGKTFFLRATLTKHSRTHTDTRRYVCGTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEALCPALVAVCAACCRAFASVAQAQEHVTKSADCIDTFARESKEKTEEPTAVLSPTSGLVRPVTKQPEPAWIACEARCAGAAALLAALPAALRGAVRAVRVEKAFRCEYCEDVFYLEEALNNHRVIHKGIKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQDKPLKEEAGPSANGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFIYKCNHCDLTFPNSWSVAYHRKKVHGKTGLDEGNGTTKMVKDDYRIPCRDCEEVLPNKTALYKHRKKEHSDLSLQINSVHVCHACNKRYASRAGLDAHTRTHTSRAACTKCGESFTHTDALHQHLKDIHGHELDFHCNVCSKRFPSRGELSAHMRAHAARPAFPCDLCGQAFRRSTAMRNHRLIHTGVRAWACARCPRRFRLRAELAAHRRRAHPAALAVIEVEGLNPGADKVMECLAANNIQHENVVEITKMSFTKGTTSVVPDSARALALLAAAPRAPVAWPRAAHAHTVAAWAAARRRPAILQRAACPAPAQHEELTGLNVQMLLRDNGLDNQPLDHSLLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00156521;
- 90% Identity
- -
- 80% Identity
- -