Dang016640.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ditula angustiorana
Gene Symbol
-
Assembly
GCA_963691745.1
Location
OY829485.1:7927405-7940391[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00015 0.0091 17.1 0.1 3 23 129 149 128 149 0.97
2 19 1.3e-06 8.3e-05 23.5 1.2 1 23 155 177 155 177 0.99
3 19 8.2e-06 0.00051 21.0 2.7 1 23 183 205 183 205 0.99
4 19 3e-05 0.0019 19.2 1.3 1 23 220 242 220 242 0.98
5 19 0.00016 0.01 16.9 0.7 1 23 257 279 257 279 0.98
6 19 7.5e-05 0.0047 18.0 3.1 1 23 294 316 294 316 0.98
7 19 5.2e-07 3.3e-05 24.8 1.5 1 23 331 353 331 353 0.99
8 19 0.00023 0.015 16.4 2.8 1 23 359 381 359 381 0.98
9 19 5e-05 0.0031 18.5 0.3 1 23 420 442 420 442 0.98
10 19 1.6e-05 0.001 20.1 2.1 1 23 448 470 448 470 0.99
11 19 0.053 3.3 9.0 1.8 1 23 477 499 477 499 0.98
12 19 8.8e-07 5.6e-05 24.0 2.3 1 23 505 527 505 527 0.99
13 19 0.061 3.8 8.8 1.8 1 23 534 556 534 556 0.98
14 19 3.6e-06 0.00023 22.1 1.5 1 23 562 584 562 584 0.99
15 19 0.00069 0.043 15.0 0.7 1 23 591 613 591 613 0.99
16 19 4e-06 0.00025 22.0 1.9 1 23 619 641 619 641 0.98
17 19 0.0029 0.18 13.0 0.3 1 20 647 666 647 669 0.93
18 19 5.6e-05 0.0035 18.4 1.4 2 23 676 697 675 697 0.96
19 19 5.1e-06 0.00032 21.6 1.4 1 23 703 726 703 726 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAGCAGATCAAAGCAGAACCTATGAGCTTCTACACATCCCACGCCCACGTCCACCCCGGCCCGCCCACGATAGTCCGCTCCGACTCCAACCATGCCATCATCAACATAAACCAGCACCACCCCGAGGACTCCAAGGACAGTCTCATTGTGCAACAGCAAGTACAGCATCAGCAGGATCTGATGGACCAACACCAGCATCCAGACATGCAGCAGGATGATGAGTTAAGCTTTAAAGGAATGGATGATGAGGGTGTCGAAATGGATATGGATGGCCGCCAATGCTCTCAGggtatgggTGTTGACATGGGATCAGTTCAAACTAAAATGGAAGTATCAAATGGAGGCCAATCAACACCACGTTCCAAGCCGCAAGCCTGTAAGGTTTGCGGCAAAGTTTTGTCATCTGCTTCTTCGTACTACGTCCATATGAAGCTTCACTCTGGAAACAAACCCTTCCAGTGCACGGTTTGCGACGCAGCTTTCTGCCGCAAGCCGTACCTGGAAGTGCACATGCGAACGCATACGGGCGAAAGACCCTTTCAGTGCGACCTGTGTCTCAAACGGTTCACACAGAAATCCAGCCTTAATACGCACAAACGCGTTCACACCGATGAGCACATGCGCGCGTTGATGGTGAAGGAGCGGCCCTACAAGTGCGAACTGTGTGCCGTCAGGTTCACGCAGAGCTCCAGCCTCAACCGCCACAAGAAAATACACACGGAGGAACACAGACGCGCGCTGCTGGCTAAGGAACGGCCCTACCAATGCGGCGTCTGCTATCTGAGATTCACGCAGAAATCGAGTTTGGGCCGGCACGGGAAAATCCATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACATGGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAGTGCGACATCTGCGACAAGCGGTTCACGCAGAAGTCCAGCCTGGGCACGCATAAGCGTATTCACACTGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAGATACATACGGTCGCGGCACGATACGGCGGGATCGGCAGCGGACCGGTCCGCGCGCGGCTGCGTCGGCGACGTGCGTTACTCGCTTTTGTGTGTGCACTGGGCGCAGTGCAAGGGCGCCCTTTCTCGTGCGGGCACTGCCCGGCGGCCTTCGCCCGCCGCCCCTACCTGGACATTCACATGCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGCCTGTCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGAGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACGTGCAAGCAGTACCTCGAGATTCACACGCGCACGCACACCGGCGAGCGCCCCTATCAGTGCGACATCTGTCTCAAGCGCTTCACGCAGAAATCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGCCGGCCCTTCCAGTGCCTGCAGTGCCCCGCCGCCTTCACCTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACCGGCGAGCGGCCCTACCAGTGCGACGTTTGCCTCAAGCGATTCGCGCAAAAGTCCACACTCAACATCCACAAACGAACGCACACAGTGCAAGGTCGGCCGTATCAGTGCATGGAGTGCCCGGCGGCGTTCACTTGCAAGCCGTACCTGGAGATACACATGCGCACGCACACTGGCGAGAGACCTTTCGAGTGCGATGTCTGTTACAAGCGCTTCACGCAGAAATCGACGCTCAACATTCACAAGCGAATTCACACCGGAGAACGGCCATATGCTTGTGATATTTGTCAGAAACGATTCGCCGTCAAGAGCTACGTAACAGCACACAGATGGTCGCACGTGGCGGACAAGCCGCTCAACTGCGACCGCTGCTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACTCGGCCGGCTCGTGCTACGAGTGCAGCGTCTGCGGCCGCACCTTCGTCCGCGACAGCTATCTAATACGACACCACAATCGCGTGCACCGTGAGAACCACAGCAACGTGTCGGCGAACAGCATCGGAACCATAAACAGCGTCGCGACCAACACTAACAACTCCAACAATAGCAACTTCGACTCGCCCGGCGTTTGTGACTTAAGTTTTGTTCCCATGGTCAATCGATACATGACCTCTCAAGGGACGCAGGTTTCCATGCAAGATACGCAGAGTAAGATGTCGGCAATGTCGCCGCAGTCTATCGCGTCGATATcgtcgccgccgccgccgcacacGCCCACTCCGCAGCCTCAGATGTCGGGTCAGATGCATCTCGCCGACTGA
Protein Sequence
MFEQQIKAEPMSFYTSHAHVHPGPPTIVRSDSNHAIININQHHPEDSKDSLIVQQQVQHQQDLMDQHQHPDMQQDDELSFKGMDDEGVEMDMDGRQCSQGMGVDMGSVQTKMEVSNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYKCELCAVRFTQSSSLNRHKKIHTEEHRRALLAKERPYQCGVCYLRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVAARYGGIGSGPVRARLRRRRALLAFVCALGAVQGRPFSCGHCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHSAGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNSNNSNFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246112;
90% Identity
iTF_00022996;
80% Identity
-