Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_963691745.1
Location
OY829475.1:16294803-16302714[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-06 0.0035 18.1 0.0 2 34 289 324 288 330 0.85
2 2 3.3e-10 3.8e-07 30.8 0.1 2 43 369 415 368 417 0.87

Sequence Information

Coding Sequence
ATGCGGGTGGTCGCGCTTGTGTTTCTCTCGCTCGTACTGGGCGCGACAGCCTGGGACGACGACGATTTAGAAGTATTTGACGTGGTCGAAGAAGTGAATCAAAATTTTTACGAACTTCTCGGAATAACACAGGAAGCGACTCCTGCAGAAGTAAAATCAGCATTCAAGAAACTGACCCTGAAACTGCATCCAGATAAAAATGATTCTCCAGATGCCGACATGCAGTTCAGGAATCTGGTGTCCGTCCACAATATATTAAAGGATCCAGGGAAACGAGAGAAATACAATGAGGTTCTTAAGAACGGTCTGCCGAACTGGCGCTCGGCGATCTACTACTACCGCCACGTCCGTAAGATGGGGCTCGCCGAGGGCTCTATCAtcttgttcatcatcatcaccttcGGCCAGTACGCTGTGGGCTGGGCAGCATATGCCGAGAAGAGGTTCACAGCGGAACAAATCCTAAACAGTAGAGGCAAAAAACATTCAAAGAAGTCGGGCTTCGACACTGGGCTGGCTGAGATACTGGACCAGCTGCCCAAACCCAGCATCAAAGACACGCTGCCCTTCCAAATACCGCGGCTCGTGTGGTGGACCATCGTGGGGATTCCGCGGGGGATCATAGAGCTGAGGAAACATTTGAAGGAGAAGGAAGAAGAAGCTAGGAGGCAGAAAAAGAGAGACGAGGAAGAGCGAGCGAGGGCGGAGcgcgaggcggcggcggcggaggAGGCGCGGCAGAACCGCGTGCGCAAGCGCCGCTTCGTGCCGCCCGCGCGGGACTGCCTGCTGGACCCCGTGGAGGCCGAGCAGGACGACGCGCCCGTCGCTGCGCCCGCTAAGCCGGCCCCGCTGATATCCGGCGGGCTGTGGACAGACGACGACCTGGCGGAGCTGATCCGGCTGGTCAAGAAGTACCCGGGCGGCTCCGCGGAGCGCTGGGAGCGCATCGCCGAAGCCATGATGCGAAGCGTCCCAGAAGTAACGCACATGGCTGCCAAACTCAAGGACAACTGCTACAAGATCCCCGGCCAGGAGCCTGAGCCGGTTCCTGTTGAGGTGCCTAAGAAGGTGAAGACCCGCAAGGCTGAGGAGGCGAGCGGCGGCAGCTGGTcgcagcagcagcagcgcgcGCTGGAGCTGGCGCTGGCAAAGCACCCCAAGGGCGGCGCCGGGGACCGCTGGCAGAAGATCGCCGCCGCCGTGCCCGGGAAGACCAAAGAGGAGTGTATGCAGCGGTGTAAATATTTATCGGAGACGTTAAGAAAGCAGAAgcagaaagaagaagaagacagACTGAGAGAAGAGAACAGCGACGCGCAAAGCGAGACGGACGGACTTATGAACGAGTCGTAG
Protein Sequence
MRVVALVFLSLVLGATAWDDDDLEVFDVVEEVNQNFYELLGITQEATPAEVKSAFKKLTLKLHPDKNDSPDADMQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYAEKRFTAEQILNSRGKKHSKKSGFDTGLAEILDQLPKPSIKDTLPFQIPRLVWWTIVGIPRGIIELRKHLKEKEEEARRQKKRDEEERARAEREAAAAEEARQNRVRKRRFVPPARDCLLDPVEAEQDDAPVAAPAKPAPLISGGLWTDDDLAELIRLVKKYPGGSAERWERIAEAMMRSVPEVTHMAAKLKDNCYKIPGQEPEPVPVEVPKKVKTRKAEEASGGSWSQQQQRALELALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSETLRKQKQKEEEDRLREENSDAQSETDGLMNES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00411401;
90% Identity
iTF_01135705;
80% Identity
-