Cpom016274.2
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- F54F2.9
- Assembly
- GCA_033807575.1
- Location
- CM066352.1:19764577-19775546[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-07 0.0022 19.3 0.1 2 34 260 295 259 301 0.85 2 2 9.4e-11 2.3e-07 32.1 0.1 2 43 340 386 339 388 0.87
Sequence Information
- Coding Sequence
- ATGACATGTGCATTAaaaagaattgaattgaatcttTTGTTGCAGGAAGCCACACCTTCGGAAATCAAATCAGCATTCAAGAAGCTCACACTTAAACTGCACCCTGACAAGAATGATGCCCCAGATGCAGATGTCCAATTCAGGAACCTGGTATCCGTACACAACATACTTAAGGACCCTGGAAAGAGAGAAAAGTACAACGAGGTGCTTAAGAATGGTCTGCCGAACTGGCGTTCAGCGGTATACTACTACCGCCACGTCCGCAAGATGGGCCTGGCCGAGGGTTCATTTATCTTGTTTGTTATTATCACCTTCGGGCAGTATGCTGTCGGCTGGGCGGCCTATGCTGAGAAGAGATTCACTGCAGAGCAAATCCTAAACAGCAGAGGCAAGAAGCACTCAAAGAAATCCGGTTTCGACACCGGACTGGCCGAGATTCTGGACCAGTTGCCCAAACCTAGCATCAAAGACACCCTGCCCTTCCAAATACCGAGGCTGATATGGTGGAGCATAGTGGGTATACCACGAGGGATCATGGAACTTAGGAGACAGATGAAGGAACGGGAGGAAGAAGCTAAGAGACAGAAGAAGAGGGAAATAGAAGAAAAAGCGCGAGCGGAGCGCGAAGCGGCCGCCATGGAGGAGGCCAAAGCAAAGGGCGCGCGCAAACGGCGCGGCTTCGTGCCCCCGGAGCGGGAATGTCTGCTAGACCCCGTGTCGGCTGAAGATGATACCCCGGTGCCGATACCCGTCAAACCGgcgCCAGTGATAACCGGCGGTCTCTGGACAGACGACGACCTAGCTGAACTAATCCGATTAGTAAAGAAGCACCCCGGGGGCTCCGCGGAGCGCTGGGAGCGCATCGCGGAGGCCATGTGCCGCTCCGTTGGCGAGGTCACGCACATGGCGGCCAAGCTCAAGGACAACTGCTACAAGATACCGGGGCAAGAGCCGGAGCCGGTGCCGGTGGAAGTGCCCAAGAAGGTGAAGACACGTAAAACAGAAGAAGTGAGCAGCGGCAACTGGTCGCAGCAGCAGCAGAAGGCGTTGGAAGTCGCTCTGGCCAAGCATCCCAAAGGCGGCGCTGGCGACCGCTGGCAAAAGATCGCAGCCGCCGTGCCTGGCAAGACCAAGGAGGAATGCATGCAGCGGTGTAAATATCTATCAGAAACGTTAAGGAAGCAGAAACAGAAAGAAGAAGAGGATAGATTAAGAGAAGGGAACGGAGAACAGAGCGACACAGAAGGACAGAACGAGGACGATATATAA
- Protein Sequence
- MTCALKRIELNLLLQEATPSEIKSAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSFILFVIITFGQYAVGWAAYAEKRFTAEQILNSRGKKHSKKSGFDTGLAEILDQLPKPSIKDTLPFQIPRLIWWSIVGIPRGIMELRRQMKEREEEAKRQKKREIEEKARAEREAAAMEEAKAKGARKRRGFVPPERECLLDPVSAEDDTPVPIPVKPAPVITGGLWTDDDLAELIRLVKKHPGGSAERWERIAEAMCRSVGEVTHMAAKLKDNCYKIPGQEPEPVPVEVPKKVKTRKTEEVSSGNWSQQQQKALEVALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSETLRKQKQKEEEDRLREGNGEQSDTEGQNEDDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00009991; iTF_00008933; iTF_00342151; iTF_00156195; iTF_00149348; iTF_00155248; iTF_00660263; iTF_01463207; iTF_00680492; iTF_00871246; iTF_00412459; iTF_00409233; iTF_00654229; iTF_01135705; iTF_00462341; iTF_01245886; iTF_00289568; iTF_00772832; iTF_01464109; iTF_01072448;
- 90% Identity
- iTF_00772832;
- 80% Identity
- -