Dang005007.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- foxf1-b
- Assembly
- GCA_963691745.1
- Location
- OY829472.1:13889932-13890669[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-39 1.4e-36 125.1 0.0 1 87 22 107 22 108 0.97
Sequence Information
- Coding Sequence
- ATGAAGACCGAGGAGCAAACCACCGAGGAGGCGGCCCGCCGCCCGCCAGCCACCCGCCGACAAGAAAAACCACCCTTCTCATACATCGCCCTTATAGTTATGGCGATCCGACACTCTCCCAATAAAAGGCTCACACTTAGCGAAATTTACGCTTTCCTTCAGCAACAGTTCCCCTTCTTTCGAAGTTCCTACCAGGGTTGGAAAAATTCCGTGCGTCACAATTTAAGTCTCAACGAGTGTTTCGTGAAGCTCCCAAAAGGGTTGGGAAGGCCGGGGAAGGGCCATTACTGGACTATCGATCCGTCTTCAGAGTTCATGTTCGAAGAGGGGTCTTTCAGGAGAAGGCCGCGTGGATTTCGACGAAAGTGCCAGGCTTTAAAACCTCAGTTTGGGAGTGGCGGATATttgtgcggcggcggcgtggccgCGCTGCCGCCGTCGCAGCCCGCCGGCTACGAGCTGGCCGgaggcagcggcgcgggcgcgggcaacGCGAGTGCCATCGATTACGGAGCTTGCGCTTATTCACACACGAGCTCTTCGAGCCAGCAGCTTCCTTACGGGAGCGAGTACTGCACTTACGGCAGCATGGGGGAGCGCGAGTGGCCGCTGCCCTACGGCGCCGTCGACTCCGGGTACCGGCCGCCGCCGTCGTCACCACCGCCTCATCATGATCTTCCTGATCTAATACCGAACTACCAATATGCTGTTACCAACGACCATGGTAAgttgttttag
- Protein Sequence
- MKTEEQTTEEAARRPPATRRQEKPPFSYIALIVMAIRHSPNKRLTLSEIYAFLQQQFPFFRSSYQGWKNSVRHNLSLNECFVKLPKGLGRPGKGHYWTIDPSSEFMFEEGSFRRRPRGFRRKCQALKPQFGSGGYLCGGGVAALPPSQPAGYELAGGSGAGAGNASAIDYGACAYSHTSSSSQQLPYGSEYCTYGSMGEREWPLPYGAVDSGYRPPPSSPPPHHDLPDLIPNYQYAVTNDHGKLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00654046;
- 90% Identity
- iTF_01463972; iTF_00009817; iTF_00008712; iTF_00155125; iTF_00156065; iTF_01134595; iTF_00342023; iTF_01135564; iTF_00021149; iTF_00148296; iTF_00149187; iTF_00659274; iTF_00660119; iTF_00658169; iTF_00656954; iTF_00655904; iTF_00325179; iTF_00772687; iTF_00022608;
- 80% Identity
- -