Basic Information

Gene Symbol
APOD
Assembly
GCA_963691745.1
Location
OY829489.1:10806947-10827181[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.00021 3 8.2 0.0 57 117 299 359 288 397 0.81
2 3 0.0025 36 4.6 0.0 62 113 668 719 655 758 0.82
3 3 0.00041 6.1 7.2 0.0 62 130 1032 1100 1019 1127 0.76

Sequence Information

Coding Sequence
ATGAAGGAGAACGGGTCCGTGACCTCCAACGGTGTTCCTTACTTCTCTTCGATCGGCTACGGCTGCGCCTTGGAAGCAGCAAATTCGTTCGATACCCCTGCAACATTGACAGCAGCCAATAACGCACTCTCAGAAATCGGCATCACAGTCAGTGAATTGACGAGCGTCGATCATTCGACCGACGCGTGCACGGCGCTCCCTGTTATTGGTGCCGGACAGCCTGTGATCCTACCTGGCCAGTGCAGCACTACAGTTCCAGTTATCCAAAACTTCCAAGTTGGCGATTTCGTAGGAACATGGTACGAGATCTCCAGCTACTATTCAGAAAATGCGGTTGGAACCTGCGCCAGGGCAGACTATACCCTCGTGGGCACAACAGTCAATGTTGTGAACAGCCAAGTCCTGAACGGTCGTTTAGATACCATCACTGGGACAGCCACCCTAATAGGAACCGACGGAGCTGGCAGATTAAACGTAGTTTTAAACGTCAATGGTGTGCCAGTGACACAAGAACTCCTGATTCTTGACACCAACTACAATGGATATGCCGTATCGTACACTTGCGTCAATTTAGCAAATAACCAAAGAAGAGTTAACAGCTGGATCCTTAGCAGGACGCAAACAATTTCTGCAGCATCTCAAACAGAAGTCGACAGGGTTATCAACTCGCTCTTGGACCTCAATACTGAATACTACCAAACTACTGACCAAAGTACTGATGGTTGCTTCTACTTCCCTGTACCTGAATTTGGCAGACCTGTTATCTTCCCTGGACAGTGTGATACAACTGTGGCTGCTGTCCCTGCCTTTAACCTGGCTCAGTTCATTGGCACATGGCATGAAGTCCAGACTTATCCTAAAGAGGAACAAACCGGCTCTTGTGTGAACCACGTTTTCACAACTAGCACCACCGCTAACACTCTCAACCTGGAATCAAATCAAGTTATCAACCAACTTGCTACTTCGGCCAGTGGTAACGTTGCCTTTGAGAGCACCGATGGAAGTGGCAGACTAAGACTGACTATGACCGTTAAtggtttaaCTATTAATTTCCCATATTGGATTCTGGCAACTGATTACAACAGTTATGCATTGGTCTACAGCTGCGTGAATAGAGCAGATAATACCAGAGCAGTCTACAGCTGGAAACTCAGCAGGGCCCAGACGCTCCCAGATGCAGCTAACACCCCCATCAATACCGCTATAGCAGCTGTTCAAGTCTTGGATAATCAATACTATGAGGCTGTTGACCAATCAGATGCCGGGTGCTTCTATTACCCAGTGTACACGCCTGGCGTGCCAGTTGTGTTCCCAGGGCAATGTGACCAGAATATTCCTGTTCAAGCTAACTTTGATCCAACAAGAtACACTGCCTTATGGCATGACATTGAGTCCTACCCGTCCACCTTCCAACAAGGAACTTGTAACAATGCCTTCTACACCCTCACGCCGCAAGGCACTGTCGATGTTTTCAACACCCAAGTTGTGAACCAGCGCTTGGACACAATGTCGGGCGTCGCTATCATACCGGATCCTACTCAGCCTGCCAAATTGATCgtcagttttccgatagcaggAACCGATCAAGTAACTTCGACCAACTATTGGGTTTTGGCAACGGATTACGACACATACTCTCTGGTTTACACTTGCGAAAACCTTGCAAACAACCAAAGGGCTGTGTTCAGTTGGAAACTGGGTAGGAGTAAAGCGGCCTTTTCGGCTGCTGCCAACCAAGCCATGAATACCGTGATCAACACCATAGACGTATTGGACAGCCGGTACTTCGCTACCCGTGACCAAACTGCTGCTGGCTGTTTCTACTTCCCAGAACCTGAAGCTGGCAGACCTGTGATCTTCCCTGGTCAGTGTGACGAAACTGTCGCTGCTGTGCCTGCCTTTACTATGGCTCAGTTTGTAGGCACTTGGCATGAAGTCCAAACTTATCCTAAAGAGGAACAAACCGGCTCTTGTGTGAACCACGATTTCACAACTGGCACCACCGCTAACACTCTCAACCTCGTGTCAAATCAAGTTATCAACCAACTTGCTACTTCGGCCAGTGGTAACGTCGCCTTTGAGAGCACCGATGGAAGTGGCAGATTAAGACTCACTATGACAGTAAAtggtttaaATATTAATTTCCCGTATTGGGTTCTGGCAACTGATTACAGCAGTTATGCGTTGGTCTACAGCTGTGTGAATAGAGCGGATGATACCAGAGCAGTCTACAGCTGGAAACTCAGCAGGACCCAGACGCTCCCAGAGGCAGCTAACGCGCCCATCAATACTGCTATAGCAGCTGTTCAAGTCTTGGATAATCAATACTACGAGGCTGTTGACCAATCAGCTGCTGGGTGCTTCTACTACCCAGTGTACACGCCTGGCGTGCCAGTTGTGTTCCCAGGACAATGTGACCAGAATATTCCTGTTCAAGCTAACTTTGATCCAACAAGAtACACTGACTTATGGCATGACATTGAGTCCTACCCGTCCACCTTCCAACAAGGATCTTGTAACAATGCCTTCTACACCCTCACACCGCAAGGCACTGTCGATGTTTTCAACACCCAAGTTGTGAACCAGCGCTTGGACACAATGTCGGGCGTCGCTGTCATACCGGATCCTACTCAGCCTGCCAAATTGATCGTCAGTTTTCCCATAGCAGGAACCGATCAAGTAACTTCGACCAACTATTGGGTTTTGGCAACGGATTACGACACATACTCTCTGGTTTACACTTGCGAAAACATTTCAATCAACCAAAGGGCTGTGTTCAGTTGGAAACTGGGTAGGAGTAAAGCGGCCTTTTCGGCTGCTGCCAACCAAGCCATGAATGCCGTGATCAACACCATAGACGTATTGGACAGCCGGTACTTCGCTACCCGTGACCAAACTGCTGCTGGCTGCTTCTACTTCCCAGAACCTGAAGCTGGCAGACCTGTGATCTTCCCTGGACAGTGTGACGAAACTGTCGCTGCTGTTCCTGCCTTCACTATGGGACAGTTTGTAGGCACATGGCATGAAGTCCAGACATATCCCAAAGAACAGCAAACGGGCACTTGTGTGAACCACGATTTCACTACTGGCACCACCGCTAACACTCTCAATCTCGTGTCTAATCAAGTGATCAACCAAATTGCCAATTCCGCCAGTGGTAACGTAGCTTTTGAGTCCACCGATGGAAGCGGCAGACTGCGCCTCAGTATGACCGTTAATGGTTTAGCTATTAATTTCCCGTATTGGATCCTGGCAACTGATTACAATAGTTATGCCTTAGTCTACAGCTGCATGAATAGAGCGGATGATACCAGAGcagTCTACAGCTGGAAACTCAGCAGAACCCAAACACTCCCGGAGGCCGCTAACACGCCCATCAATAACGCAATAGCAGCTGTTCAAGTCTTGGATAACGAATACTACGAAGCTGTTAATCAGTCCGCGGCTGCCTGCTTGGCATACCCCGACATCCCCGCTGGTGACCCAATCATCCTGCAGGGACAGTGTGGAACCGTTACGCCCGTGACTAACTTCCAATCTACCCAATTCGCCGGTAGTTGGTACGAGGCAGCGCGTTACGCGTCTGCTCGTCAAAGTGGAGACTGTGCTGCTAGCCAGTTCACCCCTAGTGGCCAGAACGGGTTCACACTGAGTCAAACCATCATCTACGAAGAGAGGCTCACTGTCGTTTCTGGTCCTGTGACACTGCCTGCTGACAATTCTGGAATACTTACTGCCACCCTGTCTGATGGAGCCGGTCTTTCATACACTGTTACGATCTACGTTTTGGATGTTGACTACCAAGATTTTGCGTTGTTGTACAGCTGCGAGAACATAGAAGGCACCACTAACAGGCAAATCTTCAGCTGGAAACTCAGCAGATCTCAAGCCGGACTCTCTCAAGCGGCTAACGACAGGATAGCTCAAGTGGTCGCAAACAATGTCGACCTTCTGGAAAACTACTACCAAACTACTGGACAAACCGACAACGACTGCTTCTATTACCCAGAATTTACTGAAACCCCTGAATCTATTGTTCTTCCTGGAGCCTGCCCAGCTATTGCTGCCAAACCTAACTTCTCTCCCGCTGATTACCTTGGCAACTGGTATGACGTAGCTAGCTACCCTATCGCATCGCAGTTCGGTACTTGCTCACGCGCAGAGTACACTCTCGTTGACGGCGTCATCACAATCCGCAACACCATGGTCGTCGATGGAGAGCTCAGAACACAAACAGGAATAGCTCGACTTACCTCGGCCGGCACTGGAATCCTCGCAGTCAcctttgtgttggaaaatggaTTGGAGGTCGTCTCTACATACTACATCCTTGAAACTGACTACACTAGTTTCTCCTTAGTTTACAACTGCCGTAACCTAGCGGATGGAACAAGACAAGTGACCAgttggaaactcagcagaacGCCAACTCTCACACCCGAGGCGAATACCATTATTAACAACATCGTCAGCAACACTCAGGGTCTCCTGGAAGAGTACTACATACCAACCAGCCAATCTGACCAGGATTGCTTCTACGTACCACAACTGGAGTCTGGACAGTCAGTGCTATTCAGAGGAGCTTGCACACCACCCACTACGCAGGCACAATTTAACGTCAACCAGTATCTAGGCTGGTGGCACGAAATGGAAAGGTACCCAAGCGATGACTTCCCCGGCCAGTGTTCCAGCGCCAACATTTTCCAAGCAGCCAACGCAATCCAAGTGGTGGATATCAGTGTGAGCGATGGATTAGTCAATGAGACTGTCAGCACCGCGACCATCAGTGCTGATGGTACCATAACGATCGTGAGGGATGGAGTTACAGTTGtctgGTACGTGCTTTCTACGGACTATACATCTTACTCACTTGTGTACTCCTGCGAAAACGTTGAAACTGGATGGGGCACTTACAGACGAGTATGGAGTGCGAAGCACAGTAAACTCCGAGCGCTGTCGGCAGCGGACAACACCGCCATAAACGCTGTTATGGCAGGAAATATCCTGCTGCACCAACAACTCTTCGAGGAAGTCGACCAGTCAGACTTGGCCTGCTTCCACTACAGAGATGATGCTAGCGAGCAAGTTATCTTACCTGGACAGTGCGACCCTCAAATCCCTGTTCAGTCAGGATTTGACATGGCTCGGTTCGCGAACACATGGTACCAGATTGAACGTTACCCCTACCCACAAGTCAGTAACGAGGGTACGTGCGTCGGTGCCCGATACACTGTCAACGGAGATAGTGTTAGAGTACTTAACTGGGAGGTGTTGGGAGGAACCCTCAACACCATTGAGGGGACAGCGACGGTAGACGCTGCCACTGCTACTTTGCAAGTTACGCTTCCCCAAGAAGGCAGCGAAGCAACCACTACAATGGCACTTCGAGTTTTGCTCACGGATTACGACAACTATGCCCTTTTGTACACCTGCGTCAATATCAATGCATTCCAAAGATCAGTCGGTGCATTCAAGGTCAGCCGTGGCAGGACATTGTCTAACGATGCCCAATACGCGATTGAAAACTACATGAACACAAGACAAGAGTTACACGAACCATACTTCATTTCCATCTCTCAAAATGACCAGTGTCTGGAGCCAAGCTCTGCCCTACTCGTCAAGAGCAGTATTATTGTAATTCTAGTCTGTGTTATACTACAGTTAGTCATGTAA
Protein Sequence
MKENGSVTSNGVPYFSSIGYGCALEAANSFDTPATLTAANNALSEIGITVSELTSVDHSTDACTALPVIGAGQPVILPGQCSTTVPVIQNFQVGDFVGTWYEISSYYSENAVGTCARADYTLVGTTVNVVNSQVLNGRLDTITGTATLIGTDGAGRLNVVLNVNGVPVTQELLILDTNYNGYAVSYTCVNLANNQRRVNSWILSRTQTISAASQTEVDRVINSLLDLNTEYYQTTDQSTDGCFYFPVPEFGRPVIFPGQCDTTVAAVPAFNLAQFIGTWHEVQTYPKEEQTGSCVNHVFTTSTTANTLNLESNQVINQLATSASGNVAFESTDGSGRLRLTMTVNGLTINFPYWILATDYNSYALVYSCVNRADNTRAVYSWKLSRAQTLPDAANTPINTAIAAVQVLDNQYYEAVDQSDAGCFYYPVYTPGVPVVFPGQCDQNIPVQANFDPTRYTALWHDIESYPSTFQQGTCNNAFYTLTPQGTVDVFNTQVVNQRLDTMSGVAIIPDPTQPAKLIVSFPIAGTDQVTSTNYWVLATDYDTYSLVYTCENLANNQRAVFSWKLGRSKAAFSAAANQAMNTVINTIDVLDSRYFATRDQTAAGCFYFPEPEAGRPVIFPGQCDETVAAVPAFTMAQFVGTWHEVQTYPKEEQTGSCVNHDFTTGTTANTLNLVSNQVINQLATSASGNVAFESTDGSGRLRLTMTVNGLNINFPYWVLATDYSSYALVYSCVNRADDTRAVYSWKLSRTQTLPEAANAPINTAIAAVQVLDNQYYEAVDQSAAGCFYYPVYTPGVPVVFPGQCDQNIPVQANFDPTRYTDLWHDIESYPSTFQQGSCNNAFYTLTPQGTVDVFNTQVVNQRLDTMSGVAVIPDPTQPAKLIVSFPIAGTDQVTSTNYWVLATDYDTYSLVYTCENISINQRAVFSWKLGRSKAAFSAAANQAMNAVINTIDVLDSRYFATRDQTAAGCFYFPEPEAGRPVIFPGQCDETVAAVPAFTMGQFVGTWHEVQTYPKEQQTGTCVNHDFTTGTTANTLNLVSNQVINQIANSASGNVAFESTDGSGRLRLSMTVNGLAINFPYWILATDYNSYALVYSCMNRADDTRAVYSWKLSRTQTLPEAANTPINNAIAAVQVLDNEYYEAVNQSAAACLAYPDIPAGDPIILQGQCGTVTPVTNFQSTQFAGSWYEAARYASARQSGDCAASQFTPSGQNGFTLSQTIIYEERLTVVSGPVTLPADNSGILTATLSDGAGLSYTVTIYVLDVDYQDFALLYSCENIEGTTNRQIFSWKLSRSQAGLSQAANDRIAQVVANNVDLLENYYQTTGQTDNDCFYYPEFTETPESIVLPGACPAIAAKPNFSPADYLGNWYDVASYPIASQFGTCSRAEYTLVDGVITIRNTMVVDGELRTQTGIARLTSAGTGILAVTFVLENGLEVVSTYYILETDYTSFSLVYNCRNLADGTRQVTSWKLSRTPTLTPEANTIINNIVSNTQGLLEEYYIPTSQSDQDCFYVPQLESGQSVLFRGACTPPTTQAQFNVNQYLGWWHEMERYPSDDFPGQCSSANIFQAANAIQVVDISVSDGLVNETVSTATISADGTITIVRDGVTVVWYVLSTDYTSYSLVYSCENVETGWGTYRRVWSAKHSKLRALSAADNTAINAVMAGNILLHQQLFEEVDQSDLACFHYRDDASEQVILPGQCDPQIPVQSGFDMARFANTWYQIERYPYPQVSNEGTCVGARYTVNGDSVRVLNWEVLGGTLNTIEGTATVDAATATLQVTLPQEGSEATTTMALRVLLTDYDNYALLYTCVNINAFQRSVGAFKVSRGRTLSNDAQYAIENYMNTRQELHEPYFISISQNDQCLEPSSALLVKSSIIVILVCVILQLVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-