Dlor000092.1
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- -
- Assembly
- GCA_963555665.1
- Location
- OY743087.1:208818-209243[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-12 1.3e-09 38.3 0.0 2 35 18 51 17 55 0.93
Sequence Information
- Coding Sequence
- ATGGCATCTACAAATTCTAAAACCAAAGAAAAGACCAGACAAACATGGGATAAAGATGCTATGGCTAATGCAATTAAAGCTATACGAGATAAACAAATGGGTTTTTTAAAAGCATCTAAAACATACGGAGTCCCCAAAACTACGCTTATACGCTTATCAAAAATGGAAGACCGATCACTTAGCAACGTTACCAACCATAAACTTGGAAGAAAATCGACTTTGCCGAGTGAATTGGAAGCTGAATTATGTGATTATATTCTAGAAATTGAAAAATCTGGATTTGGTCTTACACGCAGCGACATCAGATCTTTGGCTTACCAGCTAGCggaaaagaattatttaaagcaCACGTTTTCACAAGATAATGAATCTGCGGGAAGATCATGGTTCAAGTTATTCCTTAAGCGCCATCCATCGTTAGAATGA
- Protein Sequence
- MASTNSKTKEKTRQTWDKDAMANAIKAIRDKQMGFLKASKTYGVPKTTLIRLSKMEDRSLSNVTNHKLGRKSTLPSELEAELCDYILEIEKSGFGLTRSDIRSLAYQLAEKNYLKHTFSQDNESAGRSWFKLFLKRHPSLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457948;
- 90% Identity
- iTF_00318038;
- 80% Identity
- -