Cleg017193.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- -
- Assembly
- GCA_947359385.1
- Location
- OX375781.1:1606097-1606705[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-12 1.5e-09 37.4 0.0 2 35 18 51 17 55 0.93
Sequence Information
- Coding Sequence
- ATGGCATCTACAAATTCTACAACCAAAGGAAAGGCCAGACAAACATGGGATAAAGATGCAATGGCAAATGCAATTAAAGCTATACGAGATAAGCAAATGGGTTTTTTGAAAGCATCCAAAACATACGGAGTACCCAAAACTACGCTTATACGCTTATCAAAAATGGAAGACCAATCACTTAGCGATGTTACGAACCATAAACTTGGAAGAAAATCGACTTTTCCGAGTGAATTGGAAGCTGAATTATGTGATTATATTCTAGAAACTGAAAAATCTGGATTTGGCCTTACGCGCAGGGACATCAGATCTATGGCTTACCAGCTAGCAGACAAGAATAATTTAAAGCACTCGTTTTCACAAGATAATGAATCTGCGGGAAGATCATGGTTGAGGTTATTCCTCAAGCGCCATCCTAACCTATCCTTTCGCCGTCCAACGGGCACATCAATCGCTAGAATGAAAGGATTTAACAAAGAAAATGTAAACGCATTTTTTGACTTGTTGGAGAGCTCTTTTGATAAAATCAAGTATCCTGCAACCAATGTATAcagggttacaggaaaagtcgtgctagatccgttaagggcgtggagtacccatcatttctga
- Protein Sequence
- MASTNSTTKGKARQTWDKDAMANAIKAIRDKQMGFLKASKTYGVPKTTLIRLSKMEDQSLSDVTNHKLGRKSTFPSELEAELCDYILETEKSGFGLTRRDIRSMAYQLADKNNLKHSFSQDNESAGRSWLRLFLKRHPNLSFRRPTGTSIARMKGFNKENVNAFFDLLESSFDKIKYPATNVYRVTGKVVLDPLRAWSTHHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457948;
- 90% Identity
- iTF_01182635; iTF_00000255; iTF_01034469; iTF_00461492; iTF_00621173;
- 80% Identity
- -