Dros024087.1
Basic Information
- Insect
- Diplolepis rosae
- Gene Symbol
- nfxl1
- Assembly
- GCA_030998225.1
- Location
- JAPYXD010000555.1:3794901-3797746[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.53 3.5e+04 -3.2 1.1 15 19 124 128 123 128 0.81 2 20 0.072 4.8e+03 -0.5 0.8 4 10 159 165 158 165 0.95 3 20 3.1e-08 0.0021 19.9 16.9 1 19 173 190 173 190 0.99 4 20 0.48 3.2e+04 -3.1 0.6 6 10 216 220 215 220 0.88 5 20 1.4e-07 0.0094 17.8 14.9 4 19 229 244 227 244 0.93 6 20 0.73 4.8e+04 -3.7 12.6 1 19 279 298 273 298 0.83 7 20 2.3e-05 1.5 10.7 10.1 1 18 334 351 334 352 0.97 8 20 0.00028 19 7.2 6.6 1 12 386 397 386 397 0.94 9 20 0.92 6.1e+04 -4.0 1.3 6 10 407 411 407 411 0.96 10 20 1.6e-07 0.011 17.6 13.6 1 19 417 435 417 435 0.92 11 20 0.39 2.6e+04 -2.8 0.6 5 10 463 468 463 468 0.90 12 20 7.1e-05 4.7 9.1 8.0 9 19 483 493 481 493 0.90 13 20 0.00091 61 5.6 7.4 1 12 503 513 503 513 0.95 14 20 0.43 2.8e+04 -2.9 5.8 14 18 546 550 546 551 0.89 15 20 0.8 5.3e+04 -3.8 0.6 9 12 568 571 568 571 0.77 16 20 5.3e-05 3.5 9.6 6.6 1 12 587 598 581 598 0.91 17 20 0.76 5e+04 -3.7 1.7 6 10 614 618 614 618 0.93 18 20 0.00063 42 6.1 17.3 3 19 627 643 626 643 0.92 19 20 5.9e-08 0.0039 19.0 7.2 1 15 688 701 688 703 0.97 20 20 0.46 3.1e+04 -3.0 0.9 6 10 738 742 737 742 0.89
Sequence Information
- Coding Sequence
- atgaggAAATTCAGGCGAGCCCAGGTGGAAAACAAAGCAGCCATTGAAAAGCATTTGGTGGCCAATAACTTATTGGATTCTTCTAGTGAAgatgaagaaattgaaaatgcttTAGAGACAGCTGTAGACAAAGTTTTGTCACTATATCAAGTTGAAGGTGGCGATACAGAAAAGACTCTTTCATATTTAAGCGACGTTTTGCAATCTGGAGGAGCAATCTGCTTAATTTGTATTTCTTCTGTTAAGAAGACAGACGCGATATGGAACTGCTTAAAATGCTTTACCTTTATGCATTTGCCTTGTATTCAGCACTGGATACGCGACAGCTTAAGCTACAAACGAGAAAAAGGAATCACTCCGCAATGGGCTTGTCCAAAGTGCCGAACTGAGTACCAAGAAAATGAAGTACCTACCAAGTACTTTTGTTTCTGTGGAAAAACAACTGATCCTTCCTACCAACCTTGGTCTATCCCTCATTCCTGTGGTGAAacatgtgaaaaattacttcaacCCAACTGTGGACATAGATGTGTTCTCCTTTGTCACCCAGGACCTTGTCCTCCATGTCCGAAAACTATATCTACAAAGTGTTTTTGTGGCAAACAACCAGCACAACCTCGCCGTTGCAATGTCAAAGAATGGAGCTGTGAGAACATCTGtgagaaaaaatacaaaacctGCGATCATAGTTGCAAAGAGAAATGTCACAAAGGAGATTGTCCTCCTTGTACCGAGAATATACTCGCTTCTTGTAACTGTGAGACCAAACGTGAGTCTCGACCTTGCAGTGAATCTACCTGGTTCTGTGACAAACCCTGTGGTCGACGATTTCCCTGCAATGTTCATATTTGCGAAGGTCTTTGCCACAAACCCGAAGACTGTAAAGGTTGTCCCATCGAAAAAAACAGAACTTGTCCATGTGGTAAAAAGAAATATGTCCTTTCTTGTAAACAAAAACAAGTCCCTACCTGTGGAGATACTTGTGGCAAACTTCTAGACTGCGGTCGTCATTACTGCAACATGAGATGTCACACAGAAAAATGTGGCCAATGTCTGGAAATGGTGATCAAAACCTGCCGCTGTGGTAATTTCCAGAAAGAAATCGCTTGCACTAAAGAATTTCATTGTAATCGAAAATGCACTCAGTGGAGACTTTGTGGAAGGCATTATTGTAACAGAAAATGCTGCGATTGCCtcataaaaaatactttcaaaGTTTGTGAAAAAATCTGCGATAATCAGCTCAACTGCCAGAAGCACAAATGTGCAGCGCCTTGCCACAATGGACCTTGTTATCCTTGTACTCGAAATGATGTGATCCAATGTCGCTGCGGGAACAGCAAAATCACAGTGCCCTGTGGAACTGTTAAGAGAATCAAGCCTCCAAATtgtaataaactttgcaaaatTCCTCCAGTTTGTCATCATCCGAAACGAGAATCTCACAAATGCCACCAAGGTGCGTGTCCACCTTGTAAGAAAATTTGTGGCTTGATTCATAATAAATGTGGCCATTCTTGTCCTGCCACTTGCCATACGAAGGTCTGGACCAAGGTCAAGATCAATGGAGTTAATTCGCAGCCGACTTCACCGTGGGATAATAATAGGAAGGAGCAGTGGAAGCTCAAGACATTGCCTTGTCCACCTTGCGAAGTTTCAGTGATGGTCACATGTCTAGGAGGACATGAGACTTTACCTTGGCCTTGTCATAAGGCGGTTTCGAGTTCCTGTTTAAGGGAATGTGGAAGACTTTTGGCTTGTACCAATCACAACTGTGAGAAACTCTGTCATAAAGTAGAATTGGAAGAAGATGCAAATGAAGAGAATAGGTGTATGATTTGTGAGAAGCCTTGTGCTTTTCCTAGACCAAAAGGATGTACCCATTCTTGTCCTAAACCTTGTCATCCAGCTCCATGTAGTCCTTGTAAACAGCTTGTTAAAATTGGATGCAATTGCGGAATTAATCTCCTGTATAAAAGGTGTAGTGAACTCACATCTGCAACAGAAGAACAGAAAGAAGAAATGCTGAGGTGTGGCAATCAATGTCCAAAAAATtatttatgTGGTCATCGCTGCATTGATATTTGTCACTCTGGTCCATGTTTAAAAGCAGAGTTCTGCAACAAGAAGGTAAAGGTCTGGTGTAAATGTAGACGACTTAAAAAGGATTTTTCGTGCCTTCAAATTCGCAAAGGTCAAGGTTTCGTTGAATGCGATGAAGTTTGTCTCCAGAAAATAAAGGAACTAGAACAAGCCCGCGAGATTGAAATagcgaaaaagaagaaagaagaaGAATTACGAAATCAAAGAGAGATAGAgatgtttgaaaagaaattcaaatCTCGACGAAAAGTTAAGGACAGATCACTCAACAGCCATCAATCAGAATCCAATTCTAAAAAATGGAGATTATGGTGGTTAATTGCCATTATCTTGGCTATAGCAGCTTTTGTGATGACTTATTTAAATACATACGTTTAA
- Protein Sequence
- MRKFRRAQVENKAAIEKHLVANNLLDSSSEDEEIENALETAVDKVLSLYQVEGGDTEKTLSYLSDVLQSGGAICLICISSVKKTDAIWNCLKCFTFMHLPCIQHWIRDSLSYKREKGITPQWACPKCRTEYQENEVPTKYFCFCGKTTDPSYQPWSIPHSCGETCEKLLQPNCGHRCVLLCHPGPCPPCPKTISTKCFCGKQPAQPRRCNVKEWSCENICEKKYKTCDHSCKEKCHKGDCPPCTENILASCNCETKRESRPCSESTWFCDKPCGRRFPCNVHICEGLCHKPEDCKGCPIEKNRTCPCGKKKYVLSCKQKQVPTCGDTCGKLLDCGRHYCNMRCHTEKCGQCLEMVIKTCRCGNFQKEIACTKEFHCNRKCTQWRLCGRHYCNRKCCDCLIKNTFKVCEKICDNQLNCQKHKCAAPCHNGPCYPCTRNDVIQCRCGNSKITVPCGTVKRIKPPNCNKLCKIPPVCHHPKRESHKCHQGACPPCKKICGLIHNKCGHSCPATCHTKVWTKVKINGVNSQPTSPWDNNRKEQWKLKTLPCPPCEVSVMVTCLGGHETLPWPCHKAVSSSCLRECGRLLACTNHNCEKLCHKVELEEDANEENRCMICEKPCAFPRPKGCTHSCPKPCHPAPCSPCKQLVKIGCNCGINLLYKRCSELTSATEEQKEEMLRCGNQCPKNYLCGHRCIDICHSGPCLKAEFCNKKVKVWCKCRRLKKDFSCLQIRKGQGFVECDEVCLQKIKELEQAREIEIAKKKKEEELRNQREIEMFEKKFKSRRKVKDRSLNSHQSESNSKKWRLWWLIAIILAIAAFVMTYLNTYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980613;
- 90% Identity
- -
- 80% Identity
- -