Basic Information

Insect: Diplolepis rosae
Gene Symbol: ZFX
Assembly: GCA_030998225.1
Location: JAPYXD010000578.1:406214-409724[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.8e-05 0.008 18.4 0.8 2 23 205 227 204 227 0.96

2 13 0.00049 0.14 14.5 0.4 2 23 240 261 240 261 0.98

3 13 4e-05 0.012 17.9 1.9 2 23 264 285 263 285 0.96

4 13 0.0056 1.6 11.1 0.3 1 23 291 313 291 313 0.95

5 13 7.8e-06 0.0022 20.1 4.3 2 23 320 341 319 342 0.95

6 13 0.043 12 8.4 3.7 5 23 355 373 354 373 0.97

7 13 8.6e-06 0.0025 20.0 1.5 3 23 380 401 379 401 0.97

8 13 0.0039 1.1 11.6 0.3 2 23 417 437 416 437 0.97

9 13 2.6e-05 0.0075 18.5 0.7 1 20 443 462 443 465 0.92

10 13 3.2e-05 0.0092 18.2 2.7 1 23 473 495 473 495 0.99

11 13 0.0009 0.26 13.6 3.2 1 23 501 523 501 523 0.97

12 13 1.6e-06 0.00047 22.3 3.9 1 23 529 551 529 551 0.99

13 13 0.00017 0.047 15.9 7.0 1 23 557 579 557 580 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.8e-05	0.008	18.4	0.8	2	23	205	227	204	227	0.96
2	13	0.00049	0.14	14.5	0.4	2	23	240	261	240	261	0.98
3	13	4e-05	0.012	17.9	1.9	2	23	264	285	263	285	0.96
4	13	0.0056	1.6	11.1	0.3	1	23	291	313	291	313	0.95
5	13	7.8e-06	0.0022	20.1	4.3	2	23	320	341	319	342	0.95
6	13	0.043	12	8.4	3.7	5	23	355	373	354	373	0.97
7	13	8.6e-06	0.0025	20.0	1.5	3	23	380	401	379	401	0.97
8	13	0.0039	1.1	11.6	0.3	2	23	417	437	416	437	0.97
9	13	2.6e-05	0.0075	18.5	0.7	1	20	443	462	443	465	0.92
10	13	3.2e-05	0.0092	18.2	2.7	1	23	473	495	473	495	0.99
11	13	0.0009	0.26	13.6	3.2	1	23	501	523	501	523	0.97
12	13	1.6e-06	0.00047	22.3	3.9	1	23	529	551	529	551	0.99
13	13	0.00017	0.047	15.9	7.0	1	23	557	579	557	580	0.96

Sequence Information

Coding Sequence: ATGGATTGTACTAAAAATCAAGGTACTTTAGTTTCCTGGATTGCTGATTCCAAAAATGAAACTAAAAACACCACGATAAGGAGTTCAAAATCGTATTACAACCTGCTCGTGATTTATATTGGACAAGAAACATCACGTATGTCAACATCATATGATCTTATGGCTCGAGAAACTTGGGATGAATCTGAAGGTTCCGATAATGAAGTTGGAGGGTCTCTTCTGGACAGTCGATCCTTAGCGACGCATTTTACATCCAGCCTCTTTTTAGATCGTGATAGGAAGACTCCCACACGACGAATGTTCAAATGCTCATTTTGCTCCGATGTTTTTGAATGCCCTAAGGAACGGAGAGTTCACAGCACAACAGTTCACAAAGACGCTGGTCCTAGTAATAGTAAAAATCCCATTCAGCACGGTGAAATAAAAGATATCAAGATATCGGATGGTCGTATGAACATGTTCGAAGATATTTTCGTAGCAGGATTGCATGTTCCGCAAACATATCATCAGCCTATGCTGCATCAGCTTCAACCACCTCAACAACTGGATGCAGGAAAAActgaaactgaaaaaaaagttgataatTTAAGAATTCAGACCTCGATAGATATTTCTTGTAATATTTGTAACCAAAGATTTACTGGAGAGAAGTCTTTACAAATTCACCAGAGGAGAATGCATATGAAGGAAACTGTAAAGCGTGTTCGGGAAAATGCCAAGTGTCAGATTTGTAATGAGGAATTTTCTTCGGTTGTTTTGTTTAATACTCATTTGAAAATTCATCCTCTGGAATGCGGTCAATgtggaaaatatttctatagaaagcaaaatttcaaattacatGTGAAGCGTCATCTTGGAATAAAACCCTTTCCATGTTCAGTGTGTGACAAAGCTTTTCTCACGAAACAAAAGCTTGATGAACATACTAATGGACATACTGGCAATGCTCCTGTCAAATGTAATTTATGTAATGAAAGTTTCCGAAGGTATTCCAATTTAACTCAACATAAAAACAGACACCATTTGCATGTGAAGAAAAAGTTGAAAGATTATATTTGTCACTGTGGAGAAGTATTTCACACAAAGAAAAAACTCGCGTGGCATAAAGAGACACATGATGAGAAGCCAAAAGCTTGTACATATTGTAATGAAAGATTCATTCACATGGCTAGCCTAACACGTCACATGCGCCGCGCTCATAATCAAAGGTTCGTTCCTGATGCTCAAAGGGAAAGTGAAAATGTAGAATGTCCGATATGTAAGTGCATTTACTTGCGGTCATCTTTAGCTGTACATATGAGAGTGCATAATGGAGAGAGGCCATATGAGTGCCAAGTCTGTTCTAAAGCTTTTAGTACTAAATGGAACTTGCAGCTGCACAAGTGGACACATGCAGCAAGAAGTACCAAACCGTTTAAATGTAATCAATGCAGTGCTGCATTTTACCGGCATAGCGATTACACAGCGCACATGAATTCTCATAGAAATGTACGGCCTTATACGTGCAACTATTGTGGAGCTCAGTTCATAAGAAAATACAATTGTCTTAGGCATGTCAAGGAACACGAAGAAAATAAAGCGTACACATGTGATGTCTGTAACAAAACTTTTCATAGATCATATTACCTTAAAGAACATTTACGTGTACACTCGGGTGCAAGACCATATTCTTGTCACATTTGCGGTAAATCAAGTAGTACTAAATCGAATCACAATAAGCATGTGAGAATTCATCACGCGCGAGAACCTGTAAATACCGAAAATTAA
Protein Sequence: MDCTKNQGTLVSWIADSKNETKNTTIRSSKSYYNLLVIYIGQETSRMSTSYDLMARETWDESEGSDNEVGGSLLDSRSLATHFTSSLFLDRDRKTPTRRMFKCSFCSDVFECPKERRVHSTTVHKDAGPSNSKNPIQHGEIKDIKISDGRMNMFEDIFVAGLHVPQTYHQPMLHQLQPPQQLDAGKTETEKKVDNLRIQTSIDISCNICNQRFTGEKSLQIHQRRMHMKETVKRVRENAKCQICNEEFSSVVLFNTHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCSVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNESFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNQRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389664;
90% Identity: iTF_01389664;
80% Identity: -