Basic Information

Insect: Diplolepis rosae
Gene Symbol: Hr39
Assembly: GCA_030998225.1
Location: JAPYXD010000616.1:9674479-9680356[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.4 4.1e+04 -4.6 9.5 74 167 211 302 135 346 0.56

2 4 0.57 9.5e+03 -2.5 0.8 77 106 344 375 307 410 0.36

3 4 6.9e-08 0.0012 20.3 0.0 1 21 502 522 502 527 0.92

4 4 2.9e-72 4.9e-68 232.3 0.0 86 408 557 872 532 872 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.4	4.1e+04	-4.6	9.5	74	167	211	302	135	346	0.56
2	4	0.57	9.5e+03	-2.5	0.8	77	106	344	375	307	410	0.36
3	4	6.9e-08	0.0012	20.3	0.0	1	21	502	522	502	527	0.92
4	4	2.9e-72	4.9e-68	232.3	0.0	86	408	557	872	532	872	0.88

Sequence Information

Coding Sequence: ATGTCGGAGCAAAGCGGGCCCACGGAGGGCCCGGGCTGGTGGCCCCCGGCGCAATCTTGGAAGTCGCAGTCAGCGATGCCAGTCCGCACCTCGGAGGCAGGAAAGAACGTCTCCGTCACGACCATTAATGTGCCGCCGGCTCACGAGATGCACGACGGTAAAAGCGTATCTAAGTATCTGGGTGGACAGAATGGCGTGACGGTTTCGGTAGTTTCGAGCTGCGGATCCGGAACTGTTGATTCCGGTACCAGTATTGGATCTACCGAATCCACGTCTGTTGATGACGTTGAAGACAGTGATGGCGAAGTAAGTAAAATAGATTTCCGAGGGGTGAATTTGCGAACGAAAAAGAAGCGAGATGGATCTGTGGGACATGAAAACGACAGCTGTAGTGACAACCTGCAGCAGCAACCGGAAAGACCTATGTCCTGGGAAGGAGAGCTTTCGGATCAAGAAATGTCTTCCAACACTATTACAAATCAGGACCACGAAGAAACCTCGATGGAAGGAGTTCAGGTGTGCAGTGCGAATCCTGGACCTCAAGAACAAAAGTTTCCAATAAAACCAGAACCAGATTTTCGGTCAAGTCCTAGACTTACACTTGGCTTAAACGACACAATCGTGCCCTTGTCACATGCTCAGCAAGTCCAGCAACAGCATCAGCACCGAGGACTGGAAAGTCTCGAGCAAACGCAACAAAATGACTTGCCTTTACTCGTTGGAAAACTCCTCGGTGGTTATAATAATTCTACTCCCAATCATAGTCCTGTTCTCAATCCACGACATCATTTGACAAAACATAGTCACACTAGATCTCAGGTTCCGTCCCCTGATTCCGCAATTCATTCAGCCTACAGTGTATTCAGTTCTCCGACGCAGAGTCCCCATGCTGCACGACACTCGGCATTGGGTCCAGGAAGCCCAGTCCCATCATCCTCGTTGTCCCTCTCACGTCATAGTTTTAACAACTCGACGTCCTCTTTGTCTCTATCTCTCTCACATTCACTCTCGCGAAATAACTCGGATGCTTCAAGTAGCTGCTACAGCTACGGATCTGTCAGTCCCCCAACACACTCTCCAGTCCAACAACCAAGGCATGCACATCCACAGCATCATCATCAAGTCGCTCAAGGCAGCCCCTTGCACCTTCCAGTCTCATCCACTGGAGTCAGCCATCACTATTCAGCTCCAGGTTCCGAAATCTTCTCTGAGGGTCATCCTGACGATCAAGACGACTGCAAAATACCCTCAGCTCCCAGCGGAATCTCCACACGGCAACAGTTAATTAACAGCCCTTGTCCAATTTGTGGCGACAAGATAAGTGGCTTCCATTATGGCATCTTTTCTTGCGAATCGTGCAAGGGCTTCTTCAAAAGGACAGTCCAAAACCGGAAGAATTATGTTTGCATAAGAGGCGCTGGCTGCCCAGTGACGGTTGCGACAAGGAAAAAGTGTCCAGCTTGTCGTTTCGATAAGTGTCTTAATATGGGCATGAAATTAGAGGCGATAAGAGAGGACAGAACTCGAGGTGGTCGAAGCACCTATCAGTGTACATATACACTGCCAGCGAATCTCATCGGTAGTCCTGCTGGCGGGATGTCTGGGGATAAAATGACAGGTGGATCCTGTAGTCCAGCGCCTCCTGGATCTGAGCATCATCACTCCATGAGACATCACTCTAATCATTCGCATAAAATGCAAGCAGTCCCACAATTGCTACAGGACATCATGGATGTAGAGCATCTTTGGCATTACAATGATAATGACAGAGTTGGAAGTCAAAATGTTGGTTCTAGTGGTAACGGAAGCGGAATTGGTAGCAATGGAAGTGGTGATACTCTGGCAAGTGGTGGTAATTCGAACGGAGCAGGTGGTAGCAATGGAAATATCAACAGTAGAGAACCTCCTAGGCCTAGTTCAACTGGCTCTGTGCCTACTAGTAATCATGATCATCAGCATTCACCAAACAGTGCATCTTCCACCATCACACCCGGAACTAACCCCAATGGGAATTCAACCCAACACCCCGACTTCTTGTCAAACCTGTGCAATATTGCGGATCATAGACTGTATAAAATTGTCAAGTGGTGTAAAAGTCTGCCACTGTTCAAGAACATTTCCATTGATGACCAGATTTGTTTGCTCATCAACTCGTGGTGTGAACTTTTGCTCTTTTCCTGCTGCTTCCGCAGTATGAGCACTCCTGGCGAAATCAGGGTCTCACTGGGCAAATCAATCACCCTTGAACAGGCAAGGCAACTTGGTTTGGCGACTTGTATTGAGCGAATGCTTGCTTTCACGAATAATCTCAGGCGGCTCAGGGTGGACCAATACGAATATGTGGCGATGAAGGTTATAGTACTACTAACTTCGGACACGAGTGAATTAAAGGAACCTGAAAAGGTGAGAGCTTCTCAGGAAAAGGCTCTTCAAGCACTCCAGCAATACACAATCGCCAGGTATCCGGAGATGCCAGCAAAGTTTGGAGAACTTCTTCTCAGGATTCCCGACTTGCAAAGAACGTGTCAAGCAGGAAAAGAACTACTGAGCGCTAAGCGCGCAGAAGGAGAAGGCTGTTCTTTTAATCTCTTAATGGAGTTGTTACGTGGGGACCATTGA
Protein Sequence: MSEQSGPTEGPGWWPPAQSWKSQSAMPVRTSEAGKNVSVTTINVPPAHEMHDGKSVSKYLGGQNGVTVSVVSSCGSGTVDSGTSIGSTESTSVDDVEDSDGEVSKIDFRGVNLRTKKKRDGSVGHENDSCSDNLQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCSANPGPQEQKFPIKPEPDFRSSPRLTLGLNDTIVPLSHAQQVQQQHQHRGLESLEQTQQNDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSVSPPTHSPVQQPRHAHPQHHHQVAQGSPLHLPVSSTGVSHHYSAPGSEIFSEGHPDDQDDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCIRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGGMSGDKMTGGSCSPAPPGSEHHHSMRHHSNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRVGSQNVGSSGNGSGIGSNGSGDTLASGGNSNGAGGSNGNINSREPPRPSSTGSVPTSNHDHQHSPNSASSTITPGTNPNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGCSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_00980232;
80% Identity: iTF_00460895;