Dros060010.1
Basic Information
- Insect
- Diplolepis rosae
- Gene Symbol
- TFIP11
- Assembly
- GCA_030998225.1
- Location
- JAPYXD010000753.1:3312411-3315695[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-99 6.9e-95 319.6 13.7 1 275 396 663 396 663 0.98 2 2 0.033 7.4e+02 1.4 0.0 244 272 677 705 668 721 0.68
Sequence Information
- Coding Sequence
- aTGTCCGAAGACGAGTTAGAGAGCTTTGAAATCACAGACTATGATCTCGACAATGAATTCAACACAAACCGTCCGAGGCGAAAACTTTCCAAAAAACAACAAATGCTTGGAATGTGGGCCGATGACAGTGAAGAGGAGGAAACTTCAAGTAGACCATCGTTTAAAGTTTTCAACAAAGGTCCTAAAAATTACACTGCCCCGGTTAATTTTGTTGCTGGAGGTATTCAGCAAGCAGGAAAACCAAAAGGAAAGAAACAAGAGGAAGAAGAAGATGAAGAGGAAGAAACTGGAAGGCCTCGTAGAGGTGACGCTGATTATGTACCAAATAGTTCAAGTGACTCCGAAAACGAAGGACCTAGTAATGTGAGATCTCGGAAAACATTTTCGATGAATACAGACGGAGATATAGCTGGCTTGAGAAAAAAGAAGGCACCTCTTAATCCTGCTTTGCTGAAAACTGGCGTCGGAAGCTGGGAAGTTCATACAAAAGGAATCGGTGCAAAATTATTACTTCAAatGGGTTTCGAACCAGGAAAAGGTTTAGGAAAGAAGCTGCAAGGAATAAGTGCCCCAGTGGAAGCTCATCTCAGAAAAGGTAGAGGTGCGATTGGAGCCTATGGGCCTGAAAAATTAGCCAAGATAccagaaaagaaaaaagaggaAACCAGCGAAGATTCGAAGGagcaaaaagtaaaaatttctcAATGGCGTAAAAGCGATAGTGGGGGTAAAAAGAAAGTTAAATATTGTTATCGGAGCGTTGACCAGGTTATTGAAGATGGGAAACTCAGACCCAATAGGAAAGCTTCTGTGAGCAGTGAAATGAGTAGAGTTAAAGTTATAGACATGACAGGACCTGAGCAAAGAGTATTAAGTGGCTATCACGCTATTTCTGGTGGTCAACAATGTCCTGATGAAGTATTATTAATTTCCGACAAAAAATCCAAAACAAATTTCGTCTTACCAGAACTTCAGCACAATTTGAATTTGCTCGTTGAAATGTGCGAGCAGGATATTATCCAAAATGACAGAAGGAATCGGCATCTTAGTGATAGATTAGTTGCTCTTGAAGAAGAGAAAAAGAATCTTTCAAAGGTAGTAGATCAACATGGGCAATTGATTGATACCCTAGAGAACGTTTTAAACATCGTAAGTCGATTAATGGACAGAAGCAATGAGTTAACTCTAAAGGAGACTGCCGAAGCTTTTAAAAGTCTACAAGAAAGATATTATGAAGAATATAAAATGTATGAATTAGGAGAATTGGCCAGTAGTTTCGTAGGACCAAAAGTCAAGGAATCTTTGGTGACGTGGAATCCTTTGTTGCAACCTAAACATCCTCTAGAGTTATTCAAGCATTGGAAAGACATTCTAGAAAGTGGAAAAACTACTCTTCAGACGAggtctttgccaccttatgatCAGCTTGTGTGGAATGCGTGGATGCCTTCGATAAGAGGAGCAGTGCAAGAATGGACTTGCAGGCAACCGGATCCTCTGGTCGACCTTATAGAACATTGGTTGCCCTTACTTCCGGGTTGGATTTTAGAGAACATTTTAGATCTTCTCGTTCTTCCTAAATTAACGCTTGAAGTTGAAGAATGGAATCCTTTAACGGATACAGTCCCGATTCATACGTGGATTCACCCATGGCTTCCTCTATTACGTAACCGATTGGACACCCAGATCTATCCTATAATTCGCCGTAAACTTGGATCAGCCCTTGGAGGTTGGCATGCATCTGATAGATCTGCTAGATTAATGCTTGAACCTTGGTCTCAAGTATTCTCTAAGGGAGACTTGGAGGCCTTCTTAGTAAAAAATATCGTGCCAAAGCTTCAGATGGCACTTTCGGAACTTGTGATAAACCCACACCAACAACATTTGGACCAATGGCATTGCGTGTATGAGTGGAAAGAACTCCTTCCAGTGCACACCATGGCGGGATTActcgacaaattttttttcccgaAGTGGCTGCAGACCTTGGCTCTTTGGCTGAATCACTCGCCAAATTACGATCAAGTTACGAATTGGTATCTAGGATGGAAGGGCTTGCTTCATGAGAAATTATTGGCAGAACCTGTCATTAAAGAGCACTTTAAGAAGGCTTTAGATATGATGAACAGAGCCGTATCCATGCCTCAAGGTCTTCAGCCAGGATCTGTAGAACAAGTGTCATACTTAACAAGCTTAGAGCGACATCAGTCACCCATTTCGCAAATCCCGTCTAATGTCCAGCCAAGGGTCGAGAGTATCGCTGAAGCAATGAGGATCGTGAATCAAATACCACATGGATTTAAAGATTTTGTACAAAAGAAATGTGAAGAGAGAGGAATTCTTTTTATGCCCATTCCAAATAGATATCGAGAAGCGAAACAAGTATATAAGGTTGGGAACTTGCAGGCATACATTGACGGAAATGGACTTTTCGTCTGTCATGGCAGCACTAATTGGGTGCCGACCAATTTAAATGCTCTGTTAGATATGTGTGAACTTTAA
- Protein Sequence
- MSEDELESFEITDYDLDNEFNTNRPRRKLSKKQQMLGMWADDSEEEETSSRPSFKVFNKGPKNYTAPVNFVAGGIQQAGKPKGKKQEEEEDEEEETGRPRRGDADYVPNSSSDSENEGPSNVRSRKTFSMNTDGDIAGLRKKKAPLNPALLKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKLAKIPEKKKEETSEDSKEQKVKISQWRKSDSGGKKKVKYCYRSVDQVIEDGKLRPNRKASVSSEMSRVKVIDMTGPEQRVLSGYHAISGGQQCPDEVLLISDKKSKTNFVLPELQHNLNLLVEMCEQDIIQNDRRNRHLSDRLVALEEEKKNLSKVVDQHGQLIDTLENVLNIVSRLMDRSNELTLKETAEAFKSLQERYYEEYKMYELGELASSFVGPKVKESLVTWNPLLQPKHPLELFKHWKDILESGKTTLQTRSLPPYDQLVWNAWMPSIRGAVQEWTCRQPDPLVDLIEHWLPLLPGWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTQIYPIIRRKLGSALGGWHASDRSARLMLEPWSQVFSKGDLEAFLVKNIVPKLQMALSELVINPHQQHLDQWHCVYEWKELLPVHTMAGLLDKFFFPKWLQTLALWLNHSPNYDQVTNWYLGWKGLLHEKLLAEPVIKEHFKKALDMMNRAVSMPQGLQPGSVEQVSYLTSLERHQSPISQIPSNVQPRVESIAEAMRIVNQIPHGFKDFVQKKCEERGILFMPIPNRYREAKQVYKVGNLQAYIDGNGLFVCHGSTNWVPTNLNALLDMCEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01390211;
- 90% Identity
- -
- 80% Identity
- -