Dlae001800.1
Basic Information
- Insect
- Diplazon laetatorius
- Gene Symbol
- zfh1
- Assembly
- GCA_963662125.1
- Location
- OY759153.1:300980-302401[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00025 2.2 8.5 0.2 18 49 117 148 103 152 0.89 2 7 0.0045 40 4.4 0.2 25 48 191 213 175 217 0.81 3 7 0.05 4.4e+02 1.1 0.2 26 49 219 241 215 246 0.85 4 7 0.0027 24 5.2 0.0 16 52 266 302 263 304 0.87 5 7 0.002 18 5.6 0.0 25 45 337 357 325 363 0.85 6 7 0.00014 1.2 9.3 0.0 14 47 382 415 377 422 0.82 7 7 0.066 5.9e+02 0.7 0.1 21 41 445 465 437 469 0.74
Sequence Information
- Coding Sequence
- ATGCTCGAAAAATTGGATCTGATGAGAAAATTGCCCGTAAAATCGTCAAATCCAATCGCAAAAACGCGAACGAAaagattgacgaaaaaaaaatttgccgtatcgtcgacgatggatgaaaaaaaatcgtccatgTTGGAGACGCTACTGACGAACGGCAAACCGATGATCATCGACGAGATAAAGGAAGAAGCCGTGGACATAGACGAGGAAGATTATCCATTGGCTTATCACTGCAAATCTTGCGGCGTATTGTTCGCCACCCAACAACACATGGATCGTCACGATCTCGAGcacaaaagaaacaaatccaaaagaaaaatcatcaacaaaaacaacaacaacaacaacagcagcagcaacaacgaTTTCACGTGCATACAATGTGGACGTAATTATCGAACTTACGCAAATTTACGAAAACACATGAAGAAGAAACACGTTATTCGCAAACGTAAAAATACAATCGAATGTCCATCATCGTCACCGCAATCGCCGTCGTCCTCGCCCATCGTCGTACCTGATCCCGTCGTCGCCGATAAACCAGAAAAATCCGAAACAATCGTGGATTACAATTgtgaaatttgcaaaaaattatttcgtcacaAAAGTAATTATCAAAAACACATGTTGCGTCACAAAACCGGCGATTTAACTTGCAAACattgtccgaaaaaatttcgtttgtttcgcgATTTAACGCGTcacgaaaaaacacatttttatcagAGTTACGTTTGCAAATTGTGCGATTACGAGACAACGGTTTTGGCCGCGTTGAGCATACACATGACTCGTCACGCTGACAAATCCGAATTGCCGTTCAAATGCAACGATTGCGACAAAcattttcgtcgttcggtCGATCTTCAGGAACATTACAACGTTCATACGGGTGAAAAACCGTTTGTCTGTCAAAATTGCGGTAATTCGTTCTATCTGAGACGACAATTGTCCACGCATTGTCGTCGCGTGCATCCGGAAATGAAAGCGAATAAAATTACGAGTACGGCTTGTGATATTTGCGGACGTGTTTTGGCTACGAAACGTTCGTTGTTTCGTCACAAAGAGAGTCACAATCCGACGAAATTGTATCTTTGCGATTATTGCGGCAAGAGTTTGAGCAGCGCCGAACATTTGAAGAAACATCGACGTATTCACACGGGTGAAAAACCTTATGTCTGTGATATTTGCGGCAAAGGTTTTACGGATTCGGAAAATTTGCGCATGCACAGACGCGTGCATACCGGTGAGAAACCTTACAAGTGCGATCAGTGTCCGAAAGCTTTTTCACAACGTTCGACGTTGACGATACATCGTCGCGGACACACGGGCGAGAGACCgtatatttgtaaaatttgtcaTCGTGGATTTTCGTGTCAGGGCAATTTGACGGCACATCAAAAATCTACGTGCGTTTGA
- Protein Sequence
- MLEKLDLMRKLPVKSSNPIAKTRTKRLTKKKFAVSSTMDEKKSSMLETLLTNGKPMIIDEIKEEAVDIDEEDYPLAYHCKSCGVLFATQQHMDRHDLEHKRNKSKRKIINKNNNNNNSSSNNDFTCIQCGRNYRTYANLRKHMKKKHVIRKRKNTIECPSSSPQSPSSSPIVVPDPVVADKPEKSETIVDYNCEICKKLFRHKSNYQKHMLRHKTGDLTCKHCPKKFRLFRDLTRHEKTHFYQSYVCKLCDYETTVLAALSIHMTRHADKSELPFKCNDCDKHFRRSVDLQEHYNVHTGEKPFVCQNCGNSFYLRRQLSTHCRRVHPEMKANKITSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYICKICHRGFSCQGNLTAHQKSTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00459955;
- 90% Identity
- iTF_00459955;
- 80% Identity
- iTF_00459955;