Dcar020085.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- Trerf1
- Assembly
- GCA_029229535.1
- Location
- CM055263.1:1787692-1834742[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 1.7e-05 25.3 0.2 2 46 1102 1146 1101 1146 0.96
Sequence Information
- Coding Sequence
- ATGCAATATGTTTCAACAACTACTACTGATGATAAGAAGTCTCTAACCACTTCGGAATTGGTGAAGGTGTCAACAAAACGAGCCAGGCCCAAACCGACATCGCCCAATAGACAGGGTCCACAACAATGTCAGGTCTGTGCCAAAGTATTTGGAAACGCCTCTGCCTTGGCAAAACACAAACTGACTCATAGCGACGAAAGAAAATATGTTTGTAGCATGTGTGGAAAAGCTTTCAAGCGACAAGACCACCTAAACGGCCACATGCTCACCCACCGCAACAAAAAACCCTATGAGTGTAAAGCAGAAGGCTGTGGAAAGAGCTACTGTGATGCAAGATCGTTACGAAGGCATACCGAAAACCATCATAGCACTCCCGCCACAACAGTTAACACTACAACGACAACACTATCTCCTGCACAAGGAGCTGCCTCGGGAGATGCTGCTTCACCGCACGGTTCCAGTTGCATACAGTATGCACCGCCTCCGACGTCGAATACAGTTTCGACAACGACGTCAGTTACAGCTTCCAATGGGAAGAGTCAGTTGCAACAGTTATTGGCTACAGATTCAACGAAGGGCAGCAACAGCACCAACAATGACGGGTTAACTAAACAGCAGCTGGATTTGATACATCAAATAATGGAACAAACTCAGAGACAATCCCAGGCCGTAGCAGCGGCAGCGGCGGCAGCATCAAACAAATCCACATCATCAAAAACTTCCTCCAGTGGTAGCGGCAATATCAAGAGCGTAGGTAGCAGCAAATCTACCTCAAAATTGCATCAGAGCAAGAATACATGGTTACCCACAgCTTGTCACCAACAGCACACAAATAAAAGCAGCAGCAGTAGTAGTAGTTCGTCTACAAGTGGAACTCCAAGTCCACAAGCTAAAGTTACCACTTCATCCACTCCCACATCACCAATTAACTCTACGGCCGGAAAAACAGAACCTAAACCTGTCGAGTGTAACTTATGtcacagaaaattcaaaaatatcccAGCTCTCAACGGTCACATGAGACTTCATGGAGGTTATTTCAAAAAGGatactgaaaacaaaaaaagtgaaaagaaagaTCCGGGTGGTCCTCCATTACAAACAGCAAGTTTTAGCGTTAGAGCcctaattgaagaaaaaataatcaataaaagaataacaaataCACCTCAACCATCCAATGAAGACCAGAAAATCAATGCTCCGCCTCTCTTTCCTCTAAACGTGCATTCCTCCCCGTCTAATAACACTGACCTAGAGTCAAAAATTTCATCGTTTGTCGTACCAGCTCCTCCTCAACAGACCTCCGACAAATCCCGTAGACATTCCGATGCGGAAACATTCCGTAGCAGCACCACTCAGCAGGAGGCTCAAGCGCTGGCTGATTTAATTCTTAAGCGCGAAAAGGCTACGGTGAAAAGAACTACCTCGGACCCAGGACAGTCGTCACCAATATTGCAGTTCCAATCAAACGATTCCTTCACTTTGGCGAACGTTACTTATCAATCCGAAGAAGCAGAATTTATATCTTCAAGTTTACAAGAAGGTGTTTTCACTCAAGTTCAGGATAGCATGCTTCTACAAGGTGTGGATCCAAATCAACTAGCATCAATTCAATTCCAAGCTGAATCTCTTCTGCAGGATCATAACGAGCCGCAAATGCAAGATTTCAAAATCGAAGACATCAATCTTCAAGAATCAGTAGTTCAACATTCACCTTCGTATCAATCTAATCATTCTGTCAATCAAGATTTGCAAGCGGTACTTGATTCCCCGTTGCCAGAGAGTTTAGCAGAATTCAGTACTTTTCATTCAACAAATAGCATTGATATGCCTTCTCCCAGTTACCAAACTCAGTCACCCGCACAATATGCTCGCTCGCCACATACAATTACTGCACAATCCCCGCTTCAAAGTCCACTGATAAGGCACGATTCGCCCGGATTCGCTTATCCTACACCGCCTGCAAGTCATGAAGGACAAAGTCCAGGATTTGGACAGAATACCATACTACCAATGGTATCACCTAATGCGCAAGAGTTTGGACAAATTGTCGATAGAGGTGTTTACGAAGAACCACCTCAAGCATCTTCACCGTTGTCTGCTGCATTTTTCACTTCAACTATGTCTAGTTCGGCAGCAGTAGAAGAAGCATTAGAGGAGGTACTGCCAGGAGAACCTATTTACCCCCTAACAAACTCTCCGTCTCCTCAATCTCCTCTTGGTCTCACACCAGTACCGTCACCAATATCTAATACCGTTAGCACCTCCGACCCTCAACCATCAACAAAATTCTCAACGTCTCCGAATACTTCTACGTATTCTATGTCGGGCAACTGGTGTAACGGAGTAATGCTCCCAAACTCTGATGATCCTCTACTTTCCAGCAGCCCAAAAGATTTCGTAccaagaagaaaaattgaaattaatggaGTACCATTAAGACTCATAAGTAACAACGGCCTAATTGAATTGAACAGCTCAAATTTTGCAGGAATTCTTGTCGATGCCAATGGAGAAATTAAGCTTTTCCAAACTGGCGGTAGTacgtttcaaacaaaaaatattctattaacaAATACCCCTTTAATTAATACTCAAGATAATGACGACAAAtgtaaaaaagtgataaaaaccGTACAATGTACAATTCCAACGAAGCACGTTATCAACAAGCCTAAACAAATAACAGAAATTAAGAAAGAAGACAACAACGATGTTTTTCTAAGTCCTACTTCGATACCTGCTAGTCCTGTAAGAATATCCAGAAAGAGGCCTAGAACAGAGCCCTTACAGCTACCTGTATTACATCAATCAAAACTTAGAGCTACAAGAAGTAAACCTCCAGGTTGTGCTAGATATACACCTCAGCCAATATTAAGCCCACAGAGACCTGGAACGGGACTTTACACAAACATTAAGAACAGAAacGATGATGGTATGAACTGGAATAGTGACCCCATTCCAGAAAGTGATTCCACCCCTCACGTTAACGTCGGGTCacaatttcaatgtaaaatacCAAGCTTTTCTTCAGCACCTAATAGAGGAAGCTCTGAATCTACATACGAAGATCTCCTATGGGATCCCGGTATTAGTAACTGCACAGATAGCGAAGTGGATATGTACCTGGATTTTGCTTGCTGTGCTGCTGTGCCAGGCGGGGGAAGGAATAAAGAATATGCAATGCATCTTCTTCATATGTGTGGAGGAAACATACATGACGCGATGTTGCGATTGATGCAGCCCTCACCGAATCTTCCTACTGATCACCCTCTCTTAGCATATCAGTATTGCGAAAGTGACAAATGGTCAACGACAGAAACAGACATATTCCACAAGTCACTGCTCAAGTACGATAAGGATTTCCGCAATATTGCTCAAGAGATTCGGACGAAAACTATAAAGCAATGTGTgcaattttattatgtttggaaaaaagtgTGCGCTGATGAATACCGACGATTGAAACATCTTAGAGAAAGGAGAAATTATTACTACAAACATACAGAAATGGATATGGATGAGAAGCTATTTGCTGATGTTAAACTTTTAGGGATTGCTGATAGCGGGTGTCCGATGCCCATACCGGATACAAGAAACTTTGTTTGCGAATTCCCAGATTGTTCAGCAAGTTTCAATTCTCGAGCAGCACTAAATGGTCATATTCGAATACACGGAGGTACTGCGAGAAATTCGCCGACACCCTCCACAACAACAACAGAAAGGCGAACAGTCTCCGTCACCTCCTCGACGATGTGTCACCCAGATTCGACCGAAGAGTACCCCTGTAAGATATGCGGGAAAGTGTTCACAAAAATCAAAAGTCGTAGTGCCCATATGAAGTCTCATCGACCCCCTGACGCTGAACCAGTcaagagaaaagaaaaagatactcCCAGCTACGAACTTTCCGTGCCAAGCCCGTTTAGTACTTAG
- Protein Sequence
- MQYVSTTTTDDKKSLTTSELVKVSTKRARPKPTSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSTPATTVNTTTTTLSPAQGAASGDAASPHGSSCIQYAPPPTSNTVSTTTSVTASNGKSQLQQLLATDSTKGSNSTNNDGLTKQQLDLIHQIMEQTQRQSQAVAAAAAAASNKSTSSKTSSSGSGNIKSVGSSKSTSKLHQSKNTWLPTACHQQHTNKSSSSSSSSSTSGTPSPQAKVTTSSTPTSPINSTAGKTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTENKKSEKKDPGGPPLQTASFSVRALIEEKIINKRITNTPQPSNEDQKINAPPLFPLNVHSSPSNNTDLESKISSFVVPAPPQQTSDKSRRHSDAETFRSSTTQQEAQALADLILKREKATVKRTTSDPGQSSPILQFQSNDSFTLANVTYQSEEAEFISSSLQEGVFTQVQDSMLLQGVDPNQLASIQFQAESLLQDHNEPQMQDFKIEDINLQESVVQHSPSYQSNHSVNQDLQAVLDSPLPESLAEFSTFHSTNSIDMPSPSYQTQSPAQYARSPHTITAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPGFGQNTILPMVSPNAQEFGQIVDRGVYEEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGEPIYPLTNSPSPQSPLGLTPVPSPISNTVSTSDPQPSTKFSTSPNTSTYSMSGNWCNGVMLPNSDDPLLSSSPKDFVPRRKIEINGVPLRLISNNGLIELNSSNFAGILVDANGEIKLFQTGGSTFQTKNILLTNTPLINTQDNDDKCKKVIKTVQCTIPTKHVINKPKQITEIKKEDNNDVFLSPTSIPASPVRISRKRPRTEPLQLPVLHQSKLRATRSKPPGCARYTPQPILSPQRPGTGLYTNIKNRNDDGMNWNSDPIPESDSTPHVNVGSQFQCKIPSFSSAPNRGSSESTYEDLLWDPGISNCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPSPNLPTDHPLLAYQYCESDKWSTTETDIFHKSLLKYDKDFRNIAQEIRTKTIKQCVQFYYVWKKVCADEYRRLKHLRERRNYYYKHTEMDMDEKLFADVKLLGIADSGCPMPIPDTRNFVCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPSTTTTERRTVSVTSSTMCHPDSTEEYPCKICGKVFTKIKSRSAHMKSHRPPDAEPVKRKEKDTPSYELSVPSPFST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015119;
- 90% Identity
- iTF_00910662;
- 80% Identity
- iTF_00459251;