Dcar010841.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- retn
- Assembly
- GCA_029229535.1
- Location
- CM055257.1:640478-651416[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-20 9.8e-17 61.6 0.0 17 89 7 77 1 77 0.93
Sequence Information
- Coding Sequence
- ATGAATCGTTTTGTTTCAGGGTCGCCCATCAACAGACTTCCGATAATGGCAAAGTCCGTTCTCGATTTGTACGAATTGTACAATTTAGTAACGGCACGCGGGGGCTTAGTAGACGTAATTAACAAGAAATTGTGGCAAGAAATCATCAAAGGGTTGCATTTACCATCTTCGATCACTTCGGCGGCGTTCACTTTAAGAACACAataCATGAAATACCTGTACCCGTACGAATGCGAAAAAAGAAGATTGAGTACTCCGGCGGAATTGCAAGTGGCCATCGACGGTAATCGAAGAGAAGGCAGAAGAAGCAGCTACGGTCAATACGACACGATGCAGCGTCCGCCCAACGCCAGTTTGCAGATGTCGCCTTTGACTCTAGTCCCCCAACAACAACAACAGTTGGCCGCGAGGATGCTGGGAGGTGGAATGGGTCTGCACCACAACGGAGCCCATCATCCCAGCCATCCGCAACCGATGGGACAACCCATGAACGGCGGACCGATACCGGGCGTGGCGCCCAGCGATTTCGAAGTCCGTATGATGGAATATATGAAGCTGCTTAACAAAGAGCTGCATAGGCCGGCGGCGGTGACGCCGCCGCTACGTCAAGAAGAACCTCCGAATTCGACTTCCACGCCCGATCCGTCCGAATTGTCTCGATTGACGCTTTGgaatatatacaataataatcaATCGCCGGTAGAACCTCAAAAAGAACCGATCAATCTCTCTGAAACGTCCTCTAATTTATCGAAAAGGGAATCGGAATCGAGGGAATCGCCGCCTCCCGCTAAAAGGATCgtcaaagaagaagatatacAAGAATCTTCCAAATCCGTGTCTTCTTCGGCTACGCatatcaaaattaatagtagagGTGATTCCCGGAACGGAGACAACTCCTTGGTGGTTAGCATGGAATTGAACGGGATCACTTACCAAGGAGTTTTATTCGCCATGACTAATCCGTCGACGTCCGGAGGTAAAACGACGTTGGCGTCTTAA
- Protein Sequence
- MNRFVSGSPINRLPIMAKSVLDLYELYNLVTARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQVAIDGNRREGRRSSYGQYDTMQRPPNASLQMSPLTLVPQQQQQLAARMLGGGMGLHHNGAHHPSHPQPMGQPMNGGPIPGVAPSDFEVRMMEYMKLLNKELHRPAAVTPPLRQEEPPNSTSTPDPSELSRLTLWNIYNNNQSPVEPQKEPINLSETSSNLSKRESESRESPPPAKRIVKEEDIQESSKSVSSSATHIKINSRGDSRNGDNSLVVSMELNGITYQGVLFAMTNPSTSGGKTTLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910306;
- 90% Identity
- -
- 80% Identity
- -