Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000190.1:915341-926796[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.5 7.2e+02 2.0 1.6 1 20 7 27 7 29 0.88

2 12 0.0021 0.24 13.0 0.1 2 21 35 54 34 55 0.93

3 12 0.15 17 7.1 0.3 1 12 222 233 222 242 0.86

4 12 6e-05 0.0066 17.8 0.4 1 23 396 418 396 418 0.98

5 12 0.0003 0.033 15.6 1.2 1 23 436 458 436 458 0.98

6 12 4.7e-05 0.0052 18.2 0.3 3 23 512 532 510 532 0.96

7 12 0.00065 0.072 14.6 2.6 1 23 548 570 548 570 0.98

8 12 2.9e-06 0.00032 22.0 3.3 1 23 576 598 576 598 0.98

9 12 0.00052 0.057 14.9 5.2 1 23 604 626 604 626 0.97

10 12 3.4e-05 0.0038 18.6 0.6 1 23 632 654 632 654 0.97

11 12 0.00039 0.043 15.3 0.2 1 23 658 680 658 680 0.98

12 12 0.00054 0.06 14.8 0.1 1 23 688 711 688 711 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.5	7.2e+02	2.0	1.6	1	20	7	27	7	29	0.88
2	12	0.0021	0.24	13.0	0.1	2	21	35	54	34	55	0.93
3	12	0.15	17	7.1	0.3	1	12	222	233	222	242	0.86
4	12	6e-05	0.0066	17.8	0.4	1	23	396	418	396	418	0.98
5	12	0.0003	0.033	15.6	1.2	1	23	436	458	436	458	0.98
6	12	4.7e-05	0.0052	18.2	0.3	3	23	512	532	510	532	0.96
7	12	0.00065	0.072	14.6	2.6	1	23	548	570	548	570	0.98
8	12	2.9e-06	0.00032	22.0	3.3	1	23	576	598	576	598	0.98
9	12	0.00052	0.057	14.9	5.2	1	23	604	626	604	626	0.97
10	12	3.4e-05	0.0038	18.6	0.6	1	23	632	654	632	654	0.97
11	12	0.00039	0.043	15.3	0.2	1	23	658	680	658	680	0.98
12	12	0.00054	0.06	14.8	0.1	1	23	688	711	688	711	0.96

Sequence Information

Coding Sequence: ATGGGAGaacaaatgattttttattgtcCTCTTTGTTGCAATAATACATTTGAATCGAAACAGGCACTTTatgatcatttatttaatatatcatctaACTTAGTCTGTTCCTTGTGTACAAAAAATTTTTCGACATTGGAACAGCTAATAGGTCACCTTAAATCTGATAATTGCGAAGTAATAAATCCTAGTCAGACTACTGTTATTTTTGAAGAACACTTACAAAGCGACGCTAATGAAAGCTCTTTAGATAATACAACTTTAAAACTAGAGTTACATAATGgtaatattacaaataatgacATAGAAGACCAAATGGTTTCTCACACAGTAAAAGCAAGTACTGATCAGGGAtctgaaataggaaaaatgtatGTAGAATTACTTAGTAAGCAATTGATGAAACCATGTTTGCAAACTCaagaactaaaattaataaaggaaGATGGAGAAAGTCGTTATGTGATTTTGACTAATGAAGAATCCATTTTAAACTCTGGTGTGGCCATTGTAACAAAGCAAAATAATGATGGGACAATATCATTAACCACCTTAAaggaTACACAAACTATTGCAAATTCAAATGATAAAGCAGAGTGTGAAAATACTATATCTTTAGAAACTGTCCAGGAACCTGAGCCTGATAAAAATCAAGAAGAAATCTACAGCTGCAACACTTGTGGTGTGTCATTTTCATCAGTACTagaacatatacaaaattatcataataaccAAGATGTTGTAGTGGaggaACCTATAGAAGAAAATCACAGCAGCACTGTAGAATTTGAACAAATTGCAACTGAAGAAGTGTCAGATAAACAAATTTCTAGAAGAATGATTACAGAAACTGGAGATATAATAGAAGCCCCTGTGATGGAAGAAGATAACACCAGTGAGGCATCTAATAAAACAATGAAGCTTTTAATACCTTTAAAAGATGAGACTCAAGAAAAGAAACTGCGCACCTTCACTAGACGATATGTACAAATAGATAAATTTTGTAACAGTATAATTAAGGATATTAAACCAAATAAtgtaaaAGATGGTCCATATCATAAAGTGGTTATAAAAGAAATGCAAACAACTGATGGTGAGAAAATGAAAGTGTACAATTGCATGTCATGCAATGTGTATGTGTCAAGTCTGGCGGAATTCAATCAACATCCTTGTAAAGTTTTAAAATATCCATGTTCACAGTGTCCTGTAGCTTATGAAAATTCTAAATCATTGTGTGCACATATGAAAGTGCATAAAACAAGAATGGAATATACTGCAGACAACACCTACACATTACCAGAGAAGTTTGAATGTGAAATATGCAACACAGTGTTCCTTACAAGCAAATCATTGAAACTTCACAAAAGGATGCATGATCCTATCAAatCTCGTCCAATAGAACCTCCAGTAGAGACATCAGATGGCTCGGTGGGCAGCGGAGACAAGTTCTTCTGTTCCATATGTGATAAACTAATACCCATAGACTATAGAACTATACATCAGAATTCACACAAAACAAATACTAcaataaattgtgatatatgTAACAAGAAATTTGTTTCTAAGGAGTATTTAGATATGCATATGAGTGTACATAATTTAGATAaggtaATGGTAGGCAAACAAGACAAATCTCTCCCATACACATGTCTATACTGTAATCGAAAATTTGCGAGACCACACGAAAAAGTTAAACATGAAAGGATACACACAGGTGAGAAGCCCCACTCGTGCGGCATCTGCGGCAAGGCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCCTGCCCGCACTGCGGGAAGAGGTTCAAAGCGCACAGTGTGTACAACCACCACCTGCTGACGCACTCGGAGGTGCGCGCGTACAAGTGCCCGTTCTGTCCCAAGGCGTTCAAGACGTCGGTGCAGCTCGCCGGGCACAAGTACTCGCACACCAAACCGTTTTCCTGCCAGCAGTGTAATAgGCCGTTCGCGTCGTTATATGCAGTGCGCATGCATATGGAAGTGCATACGAGAcagaataacttaaaattttcgTGCACTTTGTGCGGAGCGAGCTACGCGCGCGCTTTCGCTTTGAAGGATCACGTGAAACAAGTTCATAAGCAGGATGTGGATAATAGTGACTTGGCGGCTCTTAAAGAAGAAAGTTGGATGGTACAAGAGAACACGGACGCGGGATCTGATGGAATGCAACTAAATAAAGAATTGCCGCAAGagaTAAATGAACTGGGTATTAATTCAAACGAACTGATCGTTCCTTAG
Protein Sequence: MGEQMIFYCPLCCNNTFESKQALYDHLFNISSNLVCSLCTKNFSTLEQLIGHLKSDNCEVINPSQTTVIFEEHLQSDANESSLDNTTLKLELHNGNITNNDIEDQMVSHTVKASTDQGSEIGKMYVELLSKQLMKPCLQTQELKLIKEDGESRYVILTNEESILNSGVAIVTKQNNDGTISLTTLKDTQTIANSNDKAECENTISLETVQEPEPDKNQEEIYSCNTCGVSFSSVLEHIQNYHNNQDVVVEEPIEENHSSTVEFEQIATEEVSDKQISRRMITETGDIIEAPVMEEDNTSEASNKTMKLLIPLKDETQEKKLRTFTRRYVQIDKFCNSIIKDIKPNNVKDGPYHKVVIKEMQTTDGEKMKVYNCMSCNVYVSSLAEFNQHPCKVLKYPCSQCPVAYENSKSLCAHMKVHKTRMEYTADNTYTLPEKFECEICNTVFLTSKSLKLHKRMHDPIKSRPIEPPVETSDGSVGSGDKFFCSICDKLIPIDYRTIHQNSHKTNTTINCDICNKKFVSKEYLDMHMSVHNLDKVMVGKQDKSLPYTCLYCNRKFARPHEKVKHERIHTGEKPHSCGICGKAFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKYSHTKPFSCQQCNRPFASLYAVRMHMEVHTRQNNLKFSCTLCGASYARAFALKDHVKQVHKQDVDNSDLAALKEESWMVQENTDAGSDGMQLNKELPQEINELGINSNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01182078;
90% Identity: iTF_00457415;
80% Identity: -