Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000064.1:6513420-6524138[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00092 0.083 14.0 0.1 2 21 34 53 33 54 0.93

2 11 0.15 13 7.1 0.3 1 12 221 232 221 241 0.86

3 11 5.6e-05 0.0051 17.8 0.4 1 23 395 417 395 417 0.98

4 11 0.00028 0.025 15.6 1.2 1 23 435 457 435 457 0.98

5 11 4.4e-05 0.004 18.2 0.3 3 23 511 531 509 531 0.96

6 11 0.00061 0.055 14.6 2.6 1 23 547 569 547 569 0.98

7 11 2.7e-06 0.00024 22.0 3.3 1 23 575 597 575 597 0.98

8 11 0.00049 0.044 14.9 5.2 1 23 603 625 603 625 0.97

9 11 3.2e-05 0.0029 18.6 0.6 1 23 631 653 631 653 0.97

10 11 0.00037 0.033 15.3 0.2 1 23 657 679 657 679 0.98

11 11 0.00051 0.046 14.8 0.1 1 23 687 710 687 710 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00092	0.083	14.0	0.1	2	21	34	53	33	54	0.93
2	11	0.15	13	7.1	0.3	1	12	221	232	221	241	0.86
3	11	5.6e-05	0.0051	17.8	0.4	1	23	395	417	395	417	0.98
4	11	0.00028	0.025	15.6	1.2	1	23	435	457	435	457	0.98
5	11	4.4e-05	0.004	18.2	0.3	3	23	511	531	509	531	0.96
6	11	0.00061	0.055	14.6	2.6	1	23	547	569	547	569	0.98
7	11	2.7e-06	0.00024	22.0	3.3	1	23	575	597	575	597	0.98
8	11	0.00049	0.044	14.9	5.2	1	23	603	625	603	625	0.97
9	11	3.2e-05	0.0029	18.6	0.6	1	23	631	653	631	653	0.97
10	11	0.00037	0.033	15.3	0.2	1	23	657	679	657	679	0.98
11	11	0.00051	0.046	14.8	0.1	1	23	687	710	687	710	0.96

Sequence Information

Coding Sequence: ATGGGAGAAGTGGTTCTTTACTGTCCTCTTTGTTGTAACGATACATTTGAATCGAAGCAGGCGCTTTatgatcatttatttaatatatcatctaATTTAGTTTGCTCTTTATGTACGAAAAGTTTTTCGACATTGGAACAGCTTGTAGGTCACCTTAAATCTGATAATTGCGAAGTAATAAATTCTACTCAGACCACTGTTATATTTGAGGGAAACTTACAAAGTGACACTAATGAAAGCTCTTTAGATAATGGAACTTTAAAGCTAGAGTTACataatggtaatattacaaataatgacATAGAAAACCAAATAACATCTAACACAATAAAAGCAAGTACTGACCAGGGTTCTGATATaggaaaaatgtatgtagaatTACTTAGTAAGCAATTGATGAAACCATGTTTGCAAACTCAAGAGCTAAAATTAGTAAAGGAAGATGGAGAAAGTCGCTATGTGATTTTGACAAATGaagaatcatttttaaattctggTGTGGCCATTGTaaccaaacaaaataatgatgGGACTATATCATTAACTACCATAaaagATACCCAAACTATTGCAAATACAAATGATAAAGCTGAGTGTGAAAATACTATAACTCTAGAAACTGTCCAAGAACCAGAGCCTGACAAAAGTCAAGAAGAAATCTACAGCTGCAACACTTGTGGTGTGTCATTTTCATCTGTACTagaacatatacaaaattatcacAATAACCAAGATGTTGTAGTTgagGAACCTATAGAAGATAACAATACCAGCACAGTAGAATTTGAACAAATTGCAACTGAAGAAATATCTGATAAGCAAATTTCTAGAAGAATGATTACAGAAACTGGAGACATAATAGAAACCCCCGTGATGGAAGACGATACAACCAGTGaggcaTCTAATAAAACTATGAAGCTTTTAATACCTTTAAAAGATGAAACCCAAGAAAAAAAACTGCGTACCTTCACTAGGCGATATGTACAAATAGACAAATTTTGTAACAGTATAATTAAGGACATTAAACCAAATAATGtaaAAGATGGTCCATATCATAAAGTGGTTATAAAAGAAATGCAAACAACTGACGGTGAGAAAATGAAAGTGTACAATTGCATGTCGTGCAATGTGTATGTGTCAAGTCTAGAGGAATTCAATCAACATCCTTGTAAAGTTTtgaaATATCCGTGTTCACAATGTCCCGTAGCctatgaaaattcaaaatcattaTGTGCTCATATGAAAGTGCATAAGACAAGAAtggaatatactgCGGACAATACCTACACATTACCAGAGAAGTTTGAATGTGAAATATGTAACACAGTGTTCCTTACAAGCAAGTCATTGAAACTTCACAAGAGGATGCATGATCCTATCAAatctcGTCCAATAGAACCTCCAGTAGAGACATCAGATGGGTCAGTGGGCAGCGGTGACAAGTTCTTCTGTTCCATATGTGATAAACTAATACCTATAGACTATAGAACTATACATCAGAATTCACACAAAACAAATACTAcgataaattgtgatatatgcAACAAGAAATTTGTTTCTAAGGAATATTTAGATATGCATATGAGTGTACATAACTTGGATAAGgtaatgGTAGGCAAACAAGACAAGTCCCTCCCATACACATGTCTATACTGTAATAGGAAGTTTGCGCGACCACATGAAAAAGTTAAACATGAGAGGATACATACAGGAGAGAAGCCCCACTCGTGCGGCATCTGCGGCAAGGCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCCTGCCCGCACTGCGGGAAGAGGTTCAAAGCGCACAGCGTGTACAACCACCACCTGCTGACGCACTCGGAGGTGCGCGCGTACAAGTGCCCGTTCTGCCCCAAGGCGTTCAAGACGTCGGTACAGCTCGCGGGGCACAAGTACTCGCACACTAAACCGTTTTCCTGCCAGCAGTGTAATAGGCCGTTCGCGTCGCTATATGCAGTGCGTATGCATATGGAAGTGCATACgagacaaaataatttaaagttttcctGTACTTTGTGTGGAGCGAGCTACGCGCGCGCTTTCGCTTTGAAGGACCACGTCAAACAAGTTCATAAACAGGATGTGGATAATAATGATTTGGCGGCCCTGAAAGAAGAAAGTTGGATGGTACAAGAAAATACGGACGCGGGATCTGATGGGATACAACTTAATAAAGAATTGCCACAAGAGatGAATGAACTGGGTATTAACTCAAACGAACTGATCGTTccttag
Protein Sequence: MGEVVLYCPLCCNDTFESKQALYDHLFNISSNLVCSLCTKSFSTLEQLVGHLKSDNCEVINSTQTTVIFEGNLQSDTNESSLDNGTLKLELHNGNITNNDIENQITSNTIKASTDQGSDIGKMYVELLSKQLMKPCLQTQELKLVKEDGESRYVILTNEESFLNSGVAIVTKQNNDGTISLTTIKDTQTIANTNDKAECENTITLETVQEPEPDKSQEEIYSCNTCGVSFSSVLEHIQNYHNNQDVVVEEPIEDNNTSTVEFEQIATEEISDKQISRRMITETGDIIETPVMEDDTTSEASNKTMKLLIPLKDETQEKKLRTFTRRYVQIDKFCNSIIKDIKPNNVKDGPYHKVVIKEMQTTDGEKMKVYNCMSCNVYVSSLEEFNQHPCKVLKYPCSQCPVAYENSKSLCAHMKVHKTRMEYTADNTYTLPEKFECEICNTVFLTSKSLKLHKRMHDPIKSRPIEPPVETSDGSVGSGDKFFCSICDKLIPIDYRTIHQNSHKTNTTINCDICNKKFVSKEYLDMHMSVHNLDKVMVGKQDKSLPYTCLYCNRKFARPHEKVKHERIHTGEKPHSCGICGKAFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKYSHTKPFSCQQCNRPFASLYAVRMHMEVHTRQNNLKFSCTLCGASYARAFALKDHVKQVHKQDVDNNDLAALKEESWMVQENTDAGSDGIQLNKELPQEMNELGINSNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01182078;
90% Identity: iTF_00458257;
80% Identity: -