Dvan023529.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000318.1:2522550-2529524[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3 6e+03 -1.9 0.0 29 44 105 120 105 120 0.84 2 2 3.5e-12 2.5e-09 37.7 0.0 1 37 166 203 166 205 0.93
Sequence Information
- Coding Sequence
- atgaacGAGgacaataatataatgatttctGAATATTTGTGTAGATGCAAATGTTGTTTGAatgacaaagaattgaaaagcTTGTGGGACGTGCATGAGAGTGATGGCGGTGACGAAATTTATGGGAATATGTTAGTCGAGTGTTTTACGTTACCGtggGTTCCATCTGATGAACCAGAACATATTTGTGAGATATGTATATTGAAACTCCGAGAAGCACttgattttaaaagaaacatattagCTATTGAAGATGTTCTATTAAATGGAATTGATATAAAAGATGAAATAGACACTCAATCTGACATAGCATCTAACACAACACTAGTCAAATATGTTCCAGAACAGCCCCAATTGAAAGTCTTAACAGAACTAGCTACTACAAGTTCAGGTCCCTCGACTCCAGGTGCCTCGAGCTCAGGGCCTCCCAGCCCATTGAGAAAATGGccgaaaaagaagaaaaaacatGAATTAACAAAATTCTACAAACAATATACTAAAGAAGATTTAGCAGAAGCTATAAGAGTAGTTAGAAACGGTGAGATGAGTTGTGCAAACGCAGCCGTTAGGTATGGCGTCCCGAAGAAAACGTTAACTGTCAAAGTTAACTCGTTTAGTGATGGGGACGGCGATGAATCCAGTAATAAGCATTACAAATTAATAGAAGAAATTAAACTCCTTCTAACGCACACTACTGCCGTGCCTTTCAAAACTAAAACAACAAGATATTACTGTTTCTACTGTTCCACCGAAGGCCCCTACTTTGAAGACACAGACGAGCTAAGGGAACATACAAGAACTAATCATGAACACGAATGGACCAAAATAGAATTGTATATGAGACCGCAATGGTTGAATGAAGTTATTAAAATGGATGTACAggatatatattgtaaaatatgtcaAACAATGTTACCAGATTGGAATAATCTATTTGTACATTTGGCAATGGAACACAATCTGGAATTTGATATGGCGTACACGAAAATAATTCCATACGGTTTAAGTTCtaatttaaaatgctttttgTGTGGGCAGAGTTTTCACAATTTTGGACATTTGGACAGCCATATGAACAATcactatagtaattatatatgttacgaGTGTGGCGACACGTTTCTTTCGGCAAGTCGCTTGGACAAACACTTGAGTGtacataaaataggcaactacCCGTGTGAATATTGTGATAAAGTGTTCAAGTTAGACAAATATAGATCGAAACATGTCAGCTTAGTTCATATTCAAGAAAATACAGTGAAGTGCTTGTACTGTCCGGAGAAGTTCCTTGGTATATTTCAGAGGCATATACATGTGACTGAGAAACATAAAGATAAGGTCAAATATATGACTTGTGAGTACTGTGGCAATAGTTATACGTGGAAACCTTATTTTCTGGCGCATATGAAGAGAAGGCATGGATCGGAGAAGAAGTATAAATGCAAATTTTGTGAAAAGAGCTTCTTGATGAAGTACGAATTGAAGAATCATATGGTGAGGCATACAGGGGAAAAGAACTTTGTGTGTGGCTTGTGTGGGTTAGGATTTACTAGGATGTGGGACCAGCCTTCAAATGATGATAACTCAGAGCATATATGTGAGAAATGTATAACAAGATTGCACAATGCCGTTGATTTCAAAAAAGAGATTTTACTCTCTCAGCAGTTGTTATCTCAACAATTAAGATGTGAATCTCTTGATGAGGTAAAGCAAGAGGAAGAATCTGACACAGATATAGAAACTGAATATCTAAGCATAGAATGTTTTGAAGATGATGACAACGGAAGAGAGAGGAAAGACAAagAATTGGATATTCTTGCCATTTCTGCTACTGAGGAATATGAGAAGCCAAGTGATTTAAAAACACACACAATAAAAACACACTTCACCAAAAGTGTAATGCAAGTGACAGTGTTACCAGATACAAACGTAAAATTGGACATCACTGGACTAAAGTGTAAAATTTGTGATATCAACATTGATACACTTGAAAGTGTTTTGTTACACTTGAGTGAAGTGCATAGTGAAAAAATACATACTAAAACACCTAATTACCTAATACCATTCAAATTTGATAGTGAACTATTAAAATGTGCCGTGTGTCGTGAAGAGTTTAAGAGTTTCAAGCTTTTAAATGACCATATGAATTTGAATCATTATACAAATTATGCGTGTCCGAAATGCGGGCGCGGATTCATAAACAAGAGGTCTTTAATAACACATAGCTATAGGCACGAGACCGGCATGTTTTCGTGTCAATTTTGCCCAAAAGTGTTTTCCAATCGTGTCAGAAAAATCGCCCACGAGCGTTCAGTGCATTTGTTTAATAGCAAACGCCATAAATGCGGTTACTGTGGAGAGAGATTCACAGATGTCGTTAAGAAAAAAGATCATGAAGTTAAAATTCATAACGCGCCAAAACCGATATACACCTGTCAAGCGTGTggcaaaaattacaaaagtcaAAGATCCCTTCGAACTCATGTACGTGGATATCATTTAATGCAGCGGCCATATAAATGCAACGAATGCGAATTTAGTGcattcaaaaatattgaattgaaaatgCACTATGATAAAGCACACCGGGTTCTAAAGATTTTAGTTGTTATATATGCACAAAGTCGTACGGACAAGTGTAGTTGGAAGACGCATATGCGGACGAAGCATGGTGAAAGTGTTTAG
- Protein Sequence
- MNEDNNIMISEYLCRCKCCLNDKELKSLWDVHESDGGDEIYGNMLVECFTLPWVPSDEPEHICEICILKLREALDFKRNILAIEDVLLNGIDIKDEIDTQSDIASNTTLVKYVPEQPQLKVLTELATTSSGPSTPGASSSGPPSPLRKWPKKKKKHELTKFYKQYTKEDLAEAIRVVRNGEMSCANAAVRYGVPKKTLTVKVNSFSDGDGDESSNKHYKLIEEIKLLLTHTTAVPFKTKTTRYYCFYCSTEGPYFEDTDELREHTRTNHEHEWTKIELYMRPQWLNEVIKMDVQDIYCKICQTMLPDWNNLFVHLAMEHNLEFDMAYTKIIPYGLSSNLKCFLCGQSFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLSVHKIGNYPCEYCDKVFKLDKYRSKHVSLVHIQENTVKCLYCPEKFLGIFQRHIHVTEKHKDKVKYMTCEYCGNSYTWKPYFLAHMKRRHGSEKKYKCKFCEKSFLMKYELKNHMVRHTGEKNFVCGLCGLGFTRMWDQPSNDDNSEHICEKCITRLHNAVDFKKEILLSQQLLSQQLRCESLDEVKQEEESDTDIETEYLSIECFEDDDNGRERKDKELDILAISATEEYEKPSDLKTHTIKTHFTKSVMQVTVLPDTNVKLDITGLKCKICDINIDTLESVLLHLSEVHSEKIHTKTPNYLIPFKFDSELLKCAVCREEFKSFKLLNDHMNLNHYTNYACPKCGRGFINKRSLITHSYRHETGMFSCQFCPKVFSNRVRKIAHERSVHLFNSKRHKCGYCGERFTDVVKKKDHEVKIHNAPKPIYTCQACGKNYKSQRSLRTHVRGYHLMQRPYKCNECEFSAFKNIELKMHYDKAHRVLKILVVIYAQSRTDKCSWKTHMRTKHGESV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00458339;
- 90% Identity
- iTF_00458339;
- 80% Identity
- iTF_00458339;