Djun023052.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000102.1:295809-298400[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 8.3e-05 1.2 10.0 0.0 26 46 63 83 55 88 0.87 2 6 0.0033 47 4.8 0.4 19 52 111 144 97 145 0.78 3 6 0.0011 16 6.4 0.1 19 46 171 198 157 204 0.79 4 6 0.0055 79 4.1 0.1 20 52 200 232 196 234 0.88 5 6 1.8e-06 0.026 15.3 0.7 11 44 246 280 235 288 0.85 6 6 0.013 1.9e+02 2.9 0.6 23 48 315 340 299 343 0.87
Sequence Information
- Coding Sequence
- ATGGTTGAATGGTTGCGTGCTGGAGACGGATTTAGTATTATAACCTATGCATTATCAGCCCTGgAGGAAAATTTGGAAAGTGTTAACCCTGTAACTCAATCTGTTAAGCCAAAATCGTCTAACGTCTATATTAGTGATGTTTCAGAAGAAGTCCTAAGTCTAAACTCAACGAAAGATGGTAAGTTTATGTGTCCAATCTGCTACAAGCGATTCGCAAGCAAATCTAACGTACAgcgacatattttattacatacacgCGAAAAATACGAATGTAAAACCTGTTACCGACAATTTGTCAATCCTCATCATTATGAGAAACACCAATTGACTCATTCCAAGGAGAAACGATATAAATGCGAAGAATGCAGCAAATTGTTTCGGACTTCTTCCAACTTGAAACAGCATAAACGAACCCATTACAACGTGAAACCGTTTGAATGTGAGCAATGTGGTCGAAAATTTGATCTCAAGGCCCATCTATTGAAACACCAGAGTCGAGGTAATTGTAAACGGCCAAGCGAAGGACCGATTGCTTGCACAATTTGCAATAAGACATTCAAAAAGGAGTTCCTTCTGAAGAGTCATTTGCGAAAACATTCAACCGAAAAGCCGTACATTTGTGATAAATGTCAGATGGCGTTCAAATACAAGTCCACGCTAATCCGGCACGTCCAGCTCCATAACGGAATCAAGCCATATTCTTGTAAAATATGCCGAAAGACATTCACCCATGCTGGTCTAATAAAACCTCATATGAGGAAGCATACTGGGGAGAAACCTTACACCTGTCCAGTTTGCAACAAGCTGTTTGCCCATAAACATAACATGCAGCGCCACACTCTATGTCACTCTAAGGTTAAACATTTAGTTTGTGACATGTGCAACAAGACTTTTCCGAAAGAAAGTCGACTTAAATATCACATGAGAACTCATACTAAGGCCAAACCGTTTATTTGCTCGATTTGTCCGAAAACTTTTTCGCATCgacagaatattatacggcATTATAGTCGAAAACATCCGAACGAAACGTATAATTCTAAGGATACAGACGCCAGCGTAGCGAAGGCTGTGTGGGAgaaggttaaaaataaaaagtttgaaataaaagttgACTTCTGTGAAGTTAAAATTGAGATTTCTGATAAGAGTGATGATGATGGTTTGGcgaaatgtaataaatga
- Protein Sequence
- MVEWLRAGDGFSIITYALSALEENLESVNPVTQSVKPKSSNVYISDVSEEVLSLNSTKDGKFMCPICYKRFASKSNVQRHILLHTREKYECKTCYRQFVNPHHYEKHQLTHSKEKRYKCEECSKLFRTSSNLKQHKRTHYNVKPFECEQCGRKFDLKAHLLKHQSRGNCKRPSEGPIACTICNKTFKKEFLLKSHLRKHSTEKPYICDKCQMAFKYKSTLIRHVQLHNGIKPYSCKICRKTFTHAGLIKPHMRKHTGEKPYTCPVCNKLFAHKHNMQRHTLCHSKVKHLVCDMCNKTFPKESRLKYHMRTHTKAKPFICSICPKTFSHRQNIIRHYSRKHPNETYNSKDTDASVAKAVWEKVKNKKFEIKVDFCEVKIEISDKSDDDGLAKCNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00780423;
- 90% Identity
- iTF_00457400;
- 80% Identity
- iTF_00457400;