Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000088.1:3639347-3641644[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.09 8.1 7.8 0.2 5 23 342 360 341 360 0.95

2 11 0.0041 0.37 12.0 0.2 3 23 368 388 366 388 0.95

3 11 0.17 15 6.9 0.9 2 23 397 418 396 418 0.94

4 11 2.1e-07 1.9e-05 25.5 0.9 2 23 423 444 423 444 0.98

5 11 0.0012 0.11 13.6 4.3 1 23 450 472 450 472 0.98

6 11 0.00013 0.011 16.7 0.3 1 20 476 495 476 497 0.95

7 11 7.1e-05 0.0064 17.5 0.2 1 23 530 553 530 553 0.95

8 11 8.8e-05 0.0079 17.2 1.4 1 23 572 594 572 594 0.98

9 11 6.6e-05 0.0059 17.6 4.5 1 23 600 622 600 622 0.98

10 11 0.0024 0.22 12.7 0.3 3 23 630 650 628 650 0.98

11 11 3.7e-06 0.00033 21.6 0.9 1 23 656 679 656 679 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.09	8.1	7.8	0.2	5	23	342	360	341	360	0.95
2	11	0.0041	0.37	12.0	0.2	3	23	368	388	366	388	0.95
3	11	0.17	15	6.9	0.9	2	23	397	418	396	418	0.94
4	11	2.1e-07	1.9e-05	25.5	0.9	2	23	423	444	423	444	0.98
5	11	0.0012	0.11	13.6	4.3	1	23	450	472	450	472	0.98
6	11	0.00013	0.011	16.7	0.3	1	20	476	495	476	497	0.95
7	11	7.1e-05	0.0064	17.5	0.2	1	23	530	553	530	553	0.95
8	11	8.8e-05	0.0079	17.2	1.4	1	23	572	594	572	594	0.98
9	11	6.6e-05	0.0059	17.6	4.5	1	23	600	622	600	622	0.98
10	11	0.0024	0.22	12.7	0.3	3	23	630	650	628	650	0.98
11	11	3.7e-06	0.00033	21.6	0.9	1	23	656	679	656	679	0.97

Sequence Information

Coding Sequence: ATGGAATCTTGGTCGGATTTGTGTCGCTGCTGTCTTGCTCCAGATTCCGAAGTGTCACTTTTTGATGCCGAAGATAGTGTATGTGAGAAATTTTCGGAAATTACAACTATTGAGCCAAGAGAAGATGATGGTTTACCCCAAAGGCTATGTAGTGATTGTTTTACATTAATGACATCAGCATATCAGTTTAGAATGCAGTGTATGAAAGTGGATAAAGAGTTAAAACTTCAATTGGAATCACTTTTAACTCAAAGTAATGAGGATGACCTATCAGAAATGACATTTTCACAAATAGAAACTCAATTGAAAGCAAATGAAGATATGACAATTGAAGATCTTGCTAAGGAATCCTTTAAACAACttgaatcaataataaaaaaggagCCCAATGATAGTGATGATGACTATTATTATGTAGTTGTTGTAGATAATCCAAAAGATGATAAGTCTGATGATGAAAAAAGTAAGGACATGGACCTAGAACCTGTGACTAAAGAAGATGAAGAAGTAAATAATGACATAAGCACAAACCAGTTTGAGAGCACAATAGATTCATTTCTAGTATCTAATCCGAAGGTTTCAATGCATGTACCAGACACCATTCTAGAAAATGAGGAAGTCGAGAATGATGACTTTGAACAACCAATGGATGTAGATGTCAATCATATGTCCCAAGATCTATCTATCAGTGAGGATTCTCAAGAAAAATCAAATGAATATGCAATACCATTAACACAAGACATAATAGAGAATTtgtcaaattcaaaaaattatataaaaattctaaccCCATCGGGTGTAGAAAAGACTATTTTGGTTAAAAGTGACAGCATTAAGTATTTAACAGGAACAGATGATTTAAAGCTTGATGGGGATGCAATGTCACAAGAAGTTATACTATATGAAGGAGATGACTCACAGTTTCAGTTAGTCAAATGCGATGGATCAGAGTTAGTTATAGAATATGCAGATGATAGTCAAATTGCAACTGTCTTGCAACAAGAAGATGGCACGTTTTTGTGTGATTGTGGTGAACAATTTGACGATTTGGAAACGTATGAGAAACATCAATACCAACACAACCCTGCTGGTGACCATTTGTGTAATTTATGCGGAAAGGGGTTTGAAACTGCAGAAATTTTAACAGGTCATATGTTAATACATAGTAACCCAACTGGCCCGTTTGTTACTTGTCCATtttgtaatcaaaatataaaaaggacTAATTTAACTCaacatatcaaatatatgcataatagCAAGCCACAGTGTGATGTTTGTTCTAAAACATTTGCAAATCAAAATAACTTGAGGCGCCATATGATGATACATACTGGCATTAAGGAATTTGAGTGTGACGTTTGCAAAAAGAGGTTCCATCAGAAAATAACCATGCAAACCCATAGACTAACACACATAAGTCCATACACTTGTAGTCAGTGTGGTATCAAATTTGAGAATAAAGGTGACTTAACAACACATAAAGGAACTGATGAATGCTCAAAatctagaatatttaaagtgaaagAAGAATTGATGAAGACAGTGAAGCAAGAAGTAACAACAGATGATGGGAAATTATTAGGATTTGCCTGTTCACTTTGTAAAAAGATGTTTTCTGTGGAATCAGCATTAGAACAACATATTGAAAGTTCACACATAATTGAATCAGACGGTcaacaagataaaaaaattaacaaaacaagCAAAAGGTTTGAATGTTGTATCTGCGGTAAGGGCTGCTCTAGCCAAGCCATGTTAATAATGCATGAAAGAGTCCATACAAATGAAAGGCCCTTCCCGTGCCAGCTTTGTTCGTTaagatttaaaactaaaactcaCTTAAGGACTCATCAATTAACTCATACTcgggaaaaaaaatttggatgttcagtttgtatgaaattctttGCATTAAAAGGTAATTTAGTGGTACATTTGCGGACTCATACTGGTGAAAGGCCTTATGTCTGCTCTATATGTGGTGAAGCATTTATAGACTCTAAATACCTGaagaaacataaacaaaagaaGCATGCTATAGATAATGTACCGTGGGATAAGTATGAATAA
Protein Sequence: MESWSDLCRCCLAPDSEVSLFDAEDSVCEKFSEITTIEPREDDGLPQRLCSDCFTLMTSAYQFRMQCMKVDKELKLQLESLLTQSNEDDLSEMTFSQIETQLKANEDMTIEDLAKESFKQLESIIKKEPNDSDDDYYYVVVVDNPKDDKSDDEKSKDMDLEPVTKEDEEVNNDISTNQFESTIDSFLVSNPKVSMHVPDTILENEEVENDDFEQPMDVDVNHMSQDLSISEDSQEKSNEYAIPLTQDIIENLSNSKNYIKILTPSGVEKTILVKSDSIKYLTGTDDLKLDGDAMSQEVILYEGDDSQFQLVKCDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFDDLETYEKHQYQHNPAGDHLCNLCGKGFETAEILTGHMLIHSNPTGPFVTCPFCNQNIKRTNLTQHIKYMHNSKPQCDVCSKTFANQNNLRRHMMIHTGIKEFECDVCKKRFHQKITMQTHRLTHISPYTCSQCGIKFENKGDLTTHKGTDECSKSRIFKVKEELMKTVKQEVTTDDGKLLGFACSLCKKMFSVESALEQHIESSHIIESDGQQDKKINKTSKRFECCICGKGCSSQAMLIMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKQKKHAIDNVPWDKYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160072;
90% Identity: iTF_00782029;
80% Identity: -