Djun022947.2
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000101.1:351239-354735[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.047 4.2 8.7 1.3 1 23 77 100 77 100 0.91 2 18 0.22 20 6.6 0.1 2 23 126 148 125 148 0.93 3 18 0.0032 0.29 12.3 2.7 3 23 173 193 171 193 0.96 4 18 0.00031 0.028 15.5 0.3 1 23 197 219 197 219 0.97 5 18 0.0081 0.73 11.1 1.0 1 23 226 249 226 249 0.97 6 18 0.0015 0.13 13.4 1.3 2 23 257 279 256 279 0.95 7 18 2e-06 0.00018 22.4 0.7 2 23 285 307 284 307 0.97 8 18 0.35 31 5.9 1.4 1 23 313 336 313 336 0.90 9 18 2e-05 0.0018 19.3 1.9 1 23 342 365 342 365 0.98 10 18 0.016 1.5 10.1 0.0 1 23 514 537 514 537 0.93 11 18 0.032 2.9 9.2 0.8 1 20 608 627 608 630 0.91 12 18 0.00041 0.037 15.1 0.6 1 23 634 656 634 656 0.97 13 18 0.026 2.4 9.4 1.0 1 23 661 684 661 684 0.93 14 18 0.005 0.45 11.7 1.1 2 23 692 714 691 714 0.91 15 18 0.00042 0.038 15.1 0.8 2 23 722 744 722 744 0.97 16 18 0.0011 0.096 13.8 1.0 1 23 749 771 749 771 0.95 17 18 3.3e-06 0.00029 21.7 0.6 1 23 777 799 777 799 0.99 18 18 4.9e-05 0.0044 18.0 2.2 1 23 805 828 805 828 0.98
Sequence Information
- Coding Sequence
- ATGCTATTGTTGTGGGTCCTAGTAAGGAACTGGAACAAGCAGGgcCTTACCGGAGCCCGAAAAAAACGAAAAGGGACTCCTAAGGAGGAAAGCGTGGCGGGTGAGGTCTTTACTAAAGTAGTTTCCCGCGAAAAGCAAATTCGCGAGATGCAGAAACAGTGGCATAACTTGACCACGCTGCTCAAATATTCCAATGTTACCCCCTTTAAGGATAGAAATGATGCGGGGTATATCTGCGCTTATTGCTTTAAAACTTATCCTGATCCCAGTATTCTAAGACAACATACTCACTTTGATCATCTCAAAGAAAAGCCTACATACAAATCTGGTTCATGCATTAGCACCTTTGTTGCTTTTTTGGACATAGTAGATCTTAAATGCACAATTTGCGAACAAAACATAGACAGTATTAAGAATTTAGCGCAACATTTGGTGAAAGAGCACGACAAGAAGTATTATTTAGCATCAGCAGATTACTTCCAACCGTTTAAGCTCACAAGTGAACCGACAATGAACTGTTGTCTCTGCGGAGAAGTATTTCACAACATGAAACTCTTGATGCAGCACATGAACGTGCACTATCGCAATTTCATATGTACAATCTGTGGTGCGGGTTTTGTGAACAGTTTCAGACTGAACAGACACGAAACAACGCACGGAAAGAAGAAATCTAGTTTCACATGTCGACATTGTGGCCAAATTTTTGCTGCTGAATCCAAGAAGAAGGCTCACGTTAATACAGAACATAAAGGCATCGCTGGTGACAGCGTGTGTCAAATTTGTAAGGctcgttttaaaaattattaccagAAAACAAGGCATATGATGCAAGTGCACAATGTTGAAGGTATAAAATGTGATATGTGCgacaagaaatttaatttaaaatctaatttagttttacaCATGAGGAGTGTTCATCTCAAGGAGAGACCTTATGAATGTTCTGTTTGTAGTATGAGCTTCTTTATAAAACGTCATATGCTAGGGCATTACATGGCGACGCACACAACTGAGAGAAAGTTTAAATGTGACCTGTGTGGTAAAGCGTACGCGACCCAAAACAGTAGGAGAAAACATATGAAGAAGAATCACGGGATCtcaaaaaatactatactGCCTACAAATGTAGTGAACAAGCCaaattaCGATAGCAGTGCTCaagatgaaaattttaactcaGTGCTTTTCTTTGTAGGTGACGAGACTGAACCAAGATATATTGAGATAACGATCAAACAGGAACCGACTTCTGACAATGAATTCAATGAGTACAATGATTATAATGTATACAGTGAAAGCAACGATTACAACGAGTTTGAGAGAAATCAGACGGAAATGACAAAAGAAATGCAAACGATCGTTAAAATAGAGCCGTTatccattgaaataaaacctttAGACAAAACAAAGCTACCGAGGAATGACAGGAAAACTAAAAAAGACCAAATTTTGGAAATGGAAAAGCATTTACAGAATATCAGTTCCATTCTACTCAACACGAATGCTACGCCTATAAGGTATCACGATGGTGCTAGTTACGTATGCGCACTTTGTCCAGAGACTTATCCTCTCCCAGCAGAACTGAAGCAACACGTATTAGATGAGCACGACGAAATTGATAAATCATCGTTCATGGAAGGACAGCGGCTGAACTCGTACATGGTGAAGCTAGATATTACCGATTTACGTTGTCTCATTTGTCACAACGCTATCGAGAGTTTCGATCGTCTGTTGGACCATTTATCGGCTGTTCACGGGAAGATCATGCACAAAGATATACCAAATCACATCCTCCCTTTCAGATTTATAGATAACAGTTTCGATTGCGTACAGTGCCCGAAGACTTTTGAACATTTCAAGTTGGTTCAAGAACATATGCCTATCCATTACCAGAACTATATATGTGAAACTTGCAACGCTCCATTTGTCAATAAGAGAACACTGCAAAATCACAACAACCGTCATAAAAAAGGTGACTTCCCCTGCAGCCAATgtccaaaaatatttgatacaaatagaaaaaagctCAATCATGAAAAATACGTGCATGACGGAGATTACAAGAGGAAGAAGTGTCCCTACTGCCAGGAAAAGTTCACTAATTACGCTAAGAAACGTTCTCATATGGTCGAGGAACATGGAGCGGAACCGATGTCGGCGAAATGCGATATATGCCTCAAGGTGTTCAGTACTCGCGCTAGATTGCGGGGGCACACGCGGCGCGCGCACATGGAGTGCACGCACGCGTGCGCCGAGTGCGAGATGAAGTTCTACACGAAGATGGAGCTCGTCAAGCACATGGTGAAACACAACCCATTAAGAACGTACCAGTGCGACATCTGTCAGAAGGCGTACGCGAGAAAGAATACTTTGcgtgaacatttaaaaattcacgCCAACGTTAGAAAATTCAAATGTGAATATTGTGAAAACGCGTTCATACAGAAGTACAGTTGGAAATCTCATATGCGGAAGAAACATAAGATCAAAGTGCCGTAG
- Protein Sequence
- MLLLWVLVRNWNKQGLTGARKKRKGTPKEESVAGEVFTKVVSREKQIREMQKQWHNLTTLLKYSNVTPFKDRNDAGYICAYCFKTYPDPSILRQHTHFDHLKEKPTYKSGSCISTFVAFLDIVDLKCTICEQNIDSIKNLAQHLVKEHDKKYYLASADYFQPFKLTSEPTMNCCLCGEVFHNMKLLMQHMNVHYRNFICTICGAGFVNSFRLNRHETTHGKKKSSFTCRHCGQIFAAESKKKAHVNTEHKGIAGDSVCQICKARFKNYYQKTRHMMQVHNVEGIKCDMCDKKFNLKSNLVLHMRSVHLKERPYECSVCSMSFFIKRHMLGHYMATHTTERKFKCDLCGKAYATQNSRRKHMKKNHGISKNTILPTNVVNKPNYDSSAQDENFNSVLFFVGDETEPRYIEITIKQEPTSDNEFNEYNDYNVYSESNDYNEFERNQTEMTKEMQTIVKIEPLSIEIKPLDKTKLPRNDRKTKKDQILEMEKHLQNISSILLNTNATPIRYHDGASYVCALCPETYPLPAELKQHVLDEHDEIDKSSFMEGQRLNSYMVKLDITDLRCLICHNAIESFDRLLDHLSAVHGKIMHKDIPNHILPFRFIDNSFDCVQCPKTFEHFKLVQEHMPIHYQNYICETCNAPFVNKRTLQNHNNRHKKGDFPCSQCPKIFDTNRKKLNHEKYVHDGDYKRKKCPYCQEKFTNYAKKRSHMVEEHGAEPMSAKCDICLKVFSTRARLRGHTRRAHMECTHACAECEMKFYTKMELVKHMVKHNPLRTYQCDICQKAYARKNTLREHLKIHANVRKFKCEYCENAFIQKYSWKSHMRKKHKIKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00248314;
- 90% Identity
- iTF_00458240;
- 80% Identity
- -