Basic Information

Insect: Diogma glabrata
Gene Symbol: lrrfip2_1
Assembly: GCA_963693315.1
Location: OY856187.1:262925767-262969217[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.26 2.7e+04 -3.4 1.1 30 37 243 250 202 306 0.54

2 2 3.4e-110 3.6e-105 354.1 32.1 1 299 327 616 327 617 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.26	2.7e+04	-3.4	1.1	30	37	243	250	202	306	0.54
2	2	3.4e-110	3.6e-105	354.1	32.1	1	299	327	616	327	617	0.91

Sequence Information

Coding Sequence: ATGACAACCAAAACTAATAGTGATGCATTGATTGTTAATATTGATCACAACTATAACACTAGTTCTGATCAATGTAATGTACTTGAAATGAAAACGCAAGAATTCAATACAAATATcatcaaacaaaacaatgataataatataagtaaaataattgtaaatgaAAGTGATTACAATAGTCACGATAATacaacaataatattattaaatggTGATGGTGGCAAAATCTTATGGGACTCAAATCATAAAGACACAATCAATCAAGTAAATTCGGATATAAATGTTTGTGAGAATTATCTTGATGGTGAGAAGTTTGATTTATCAGATAGTGAGTTTAAAGACATTTTGGATGATGATAAAAACGAAGAAAATGggaatacaaataaaaatgatagTGCTAATGATAATTATGAATCTTGCAGTGATAGTTCAATTGTTAAATATTTAGATGCTGTCGAtattaatattgataaaaaagttattgataagataaaaaatttgataagTAATGATAGTGATATTATCAATCCAGAGacaattttaaatgaaaatttagttTGCTATAAAGAACCCGAAAATTTAgttaaaagtattaaaataatagataataatataaaaaataatagtaacatgtatttttcatgtgacaaaagtgaatatgtaaataatttattcagtCAAGATAGTATTAACAGTAGTAAATATAATAGTAACAGTAACAACGAATTAAATGAAACGTTCAACCGTCATATCGTCAAATGTCAAACAACATCTTCAACACCGATCAGTGCTAATAAAACACAACGTTCATTTTCGGTTGATGATTATGGAAGTAGTAATAATGCAGTAGTTTTGAAAGCGAGCCGAAGGAATTCATCTGCTCATCATTATCAACATCAATCTAACTCTTTTGATGATGAGTATCTAGATGGCGATGATGGAGTTATTGTTGATTTCTTAGGAAAAGCCAATGAAATTGCCGAAGCAAGACTGGCTGCACGTCGGCAAGCCCGCGCAGAAGCACGAGAAATTCGGATGAAAGAATTAGAACGGCAGCAAAaggaacaagaacaaaatgctgATCGTGTATTTGATATGCAAACTGCAGCTGGAATCGACCCTTTATCACGATCCCGTATAGCGGTCTTGTCAACCCCAACTGGACCATCAACTCTGCGGGTTAGTTCAGTGTCGTCACGACGTAGCAGTGAAGATTCTTTAGAAGAAGAAGGTAGGAGCTTGCGTGATTTACGACACGAAATCAAAGATGTAGAAGAAAGATTTCGTAAAGCCATGATTGCCAACGCACAGTTAGATAATGAAAGAGCATCACAATCTTATcaaattcaattattaaaaGATAAGCTTGAAGAAATGGAAGAATCACATTCACAGTTACAAAGAGAATTTAGAGAAAAGTGTCGTGATCATGATGCCTTAAAACGCAATAACGATAAATTAAATgaagaattaaaattagtacAGGGGCAATTAAATGAAAGGGATACATTAATAATCGAACAAGGCTTAGTCATAGTTATTATCGAAGATGAAAATGGTACAGATGCCAAGCGTGCTCTAGTCAGTGCTGAGAATGCACATTTACTGGAAACAACTCAAGGTTCATTAGATGTAAGACTCAAGAAATTCTTCGAAGAAAAAAAGCAATTACAAAATGAAGTACAACAACTTCACCAACAACTATCGGATGCTAAGTGCCAAGGTCGACGATCAGGGTCTACGAATGGTGTGTTAGGAGATGAAGATTACGAAGATGCTCAAAgagaatcaaataaattaattgccGATTTTAAGTATAAATTACAAAAAGCTGAACAAGAAATAGCAAGTTTGCAAGCAAGTTTAGCACGGTCTGAAACTCAAGTAATTCGATATAAAAGTACGGCAGAAGCAGCTGAAAAAGCAGAGGCAGAGTTAAAAATCGAACGTCGTAAGCTGCAAAGGGAGaaatgTCGGAAAATCGGGCATTCAATCGGGCACCTATTCATTGAATCTCCCGATGCAACGAATTTTGAAGgtgaaaatgaaattaatgcCAACGACGAAGACTACCAAGATGATGAAGAACAACCACAGTTTAAAAATATTGGCGCAATACTAAAAGTCTGTCAAATCGATGTCGAAGGTTTGACGAAATCAAAAAGTGTTTATCTATCCAGACTGATGAGACAAACGAAATGTGATATATTGCTCCTACAGGAAATACATACAGTAAGTGATGCACAATTAGAAAACTATGGATctgtaaataatttaatatgtgTGGAAAAAATTCATCACCAACATTATGGAATTGCCACCTATGTTAAAGAAGATCTGTTAGACGAATGTACCGTTATTTCCAAACTATCGGAAAATGATTTTGCTTATATTGTAATCAAAATCCAGGAAGTAACCATATATAACACTTATAAACCACCTTTAAAACACTGGATTTCCATACCATTATTTGAACATCCAGTTGTGTACATGGAAAGTCTCACTTTTCATTCTGGAAGATGGAATACTGGCTCAAATCCTGATTTATGTTTTGTTTCGCTTGATAACGATAATATAGCCTTACCAGCTATAAGATCAGTTCGTCAGCAATTTCCAAGAAGCCAACGTCGGCCTGTATTTTTTGAATTGggaattcaaattccaattATAAAATCATTGCCAAAACCAAGATGGAATTTCAAAAAAGTAAATTGGCCTGGATTTGCGCTGGCTGTTGATAAAAATATTCGATGGTTTGCACCAGAACTAAACAATTTTAAGCGCTTTACGGGCGTTTTAATTGGTTCAGctaaaaaatatattccaaGAGGATTCAGAAAACTATATATACCTGATTGGAATAATGAATGTGAAAATTTATGCCAACTATATCAAAAAAACGATTCGAACATCATTGGAACTCGTTTGATCAAAGCACTTAATTAG
Protein Sequence: MTTKTNSDALIVNIDHNYNTSSDQCNVLEMKTQEFNTNIIKQNNDNNISKIIVNESDYNSHDNTTIILLNGDGGKILWDSNHKDTINQVNSDINVCENYLDGEKFDLSDSEFKDILDDDKNEENGNTNKNDSANDNYESCSDSSIVKYLDAVDINIDKKVIDKIKNLISNDSDIINPETILNENLVCYKEPENLVKSIKIIDNNIKNNSNMYFSCDKSEYVNNLFSQDSINSSKYNSNSNNELNETFNRHIVKCQTTSSTPISANKTQRSFSVDDYGSSNNAVVLKASRRNSSAHHYQHQSNSFDDEYLDGDDGVIVDFLGKANEIAEARLAARRQARAEAREIRMKELERQQKEQEQNADRVFDMQTAAGIDPLSRSRIAVLSTPTGPSTLRVSSVSSRRSSEDSLEEEGRSLRDLRHEIKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESHSQLQREFREKCRDHDALKRNNDKLNEELKLVQGQLNERDTLIIEQGLVIVIIEDENGTDAKRALVSAENAHLLETTQGSLDVRLKKFFEEKKQLQNEVQQLHQQLSDAKCQGRRSGSTNGVLGDEDYEDAQRESNKLIADFKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQREKCRKIGHSIGHLFIESPDATNFEGENEINANDEDYQDDEEQPQFKNIGAILKVCQIDVEGLTKSKSVYLSRLMRQTKCDILLLQEIHTVSDAQLENYGSVNNLICVEKIHHQHYGIATYVKEDLLDECTVISKLSENDFAYIVIKIQEVTIYNTYKPPLKHWISIPLFEHPVVYMESLTFHSGRWNTGSNPDLCFVSLDNDNIALPAIRSVRQQFPRSQRRPVFFELGIQIPIIKSLPKPRWNFKKVNWPGFALAVDKNIRWFAPELNNFKRFTGVLIGSAKKYIPRGFRKLYIPDWNNECENLCQLYQKNDSNIIGTRLIKALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -